Sequence of DPV Euphorbia yellow mosaic virus
Euphorbia yellow mosaic virus - Goias [Brazil:GO:Itaberai:5082A:2007] segment DNA-A, complete sequence.
ACC No: JF756671
Dated: 2011-05-04 | Length: 2610 | CRC: 1552163279
ID JF756671; SV 1; linear; genomic DNA; STD; VRL; 2610 BP. XX AC JF756671; XX DT 04-MAY-2011 (Rel. 108, Created) DT 04-MAY-2011 (Rel. 108, Last updated, Version 1) XX DE Euphorbia yellow mosaic virus - Goias [Brazil:GO:Itaberai:5082A:2007] DE segment DNA-A, complete sequence. XX KW . XX OS Euphorbia yellow mosaic virus - Goias [Brazil:GO:Itaberai:5082A:2007] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2610 RA Fernandes F.R., Albuquerque L.C., Oliveira C.L., Cruz A.R.R., Rocha W.B., RA Pereira T.G., Naito F.Y.B., Dias N.M., Nagata T., Faria J.C., Zerbini F.M., RA Aragao F.J.L., Inoue-Nagata A.K.; RT "Molecular and biological characterization of a new Brazilian begomovirus, RT Euphorbia yellow mosaic virus (EuYMV), infecting Euphorbia heterophylla RT plants"; RL Unpublished. XX RN [2] RP 1-2610 RA Fernandes F.R., Albuquerque L.C., Oliveira C.L., Cruz A.R.R., Rocha W.B., RA Pereira T.G., Naito F.Y.B., Dias N.M., Nagata T., Faria J.C., Zerbini F.M., RA Aragao F.J.L., Inoue-Nagata A.K.; RT ; RL Submitted (31-MAR-2011) to the EMBL/GenBank/DDBJ databases. RL Phytopathology, Embrapa Vegetables, Rod. Brasilia/Anapolis BR 060 Km 09 RL Gama - DF, Gama, Federal District 70359-970, Brazil XX FH Key Location/Qualifiers FH FT source 1. .2610 FT /organism="Euphorbia yellow mosaic virus - Goias FT [Brazil:GO:Itaberai:5082A:2007]" FT /segment="DNA-A" FT /host="Euphorbia heterophylla" FT /mol_type="genomic DNA" FT /country="Brazil:Itaberai, Goias" FT /collection_date="2007" FT /clone="50823" FT /db_xref="taxon:1016874" FT CDS 206. .955 FT /codon_start=1 FT /product="AV1" FT /note="coat protein" FT /protein_id="AED01990.1" FT /translation="MPKRDAPWRLMAGTSQVSRNVNYSPRGGPKIDKASSWVNRPMYRK FT PRIYRMYRGPDVPKGCEGPCKVQSYESRHDVSHVGKVICVSDVTRGNGITHRVGKRFCV FT KSVYILGKIWMDETIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATVKN FT DLRDRFQVMHKFYAKVTGGQYASNEQSIVKRFWKVNNYVVYNHQEAGKYENHTENALLL FT YMACTHASNPVYATLKIRIYFYDSITN" FT CDS complement(952. .1350) FT /codon_start=1 FT /product="AC3" FT /note="replication enhancer protein; REn" FT /protein_id="AED01993.1" FT /translation="MDLSTGEFITVSQAENSVFIWEVPNPLYFKIIRVEDPIYTSLRIY FT HIQIRFNYNLRRALNLRKAFLNFQVWTTSIRASGMTYLSRFRHLVLMYLDQLGVVGLNH FT VIRAVRFATDRSYVNDVLENHEIKFNFY" FT CDS complement(1097. .1486) FT /codon_start=1 FT /product="AC2" FT /note="transcriptional activator protein; TrAP" FT /protein_id="AED01992.1" FT /translation="MLNSSSSTPPSIKAQHRIAKRRAIRRRRIDLNCGCSIFLHIDCAD FT YGFKHRGVHHCVSGREFRFYLGGSKSPLFQDHQGRGPDIHVAPDIPHPDPVQLQPQEGT FT ESTQSFPELPSLDDIDSSFWDDLFK" FT CDS complement(1398. .2552) FT /codon_start=1 FT /product="AC1" FT /note="replication-associated protein; Rep" FT /protein_id="AED01991.1" FT /translation="MGHQDTTKNRFLRGLPLVSWLIFSIMPRNSNSFRLTAKNIFLTYP FT RCDIPKDEVLQLLRDLPWAVVKPTYIRVARELHADGFPHLHCLIQLSGKSNIKDARFFN FT LTHPRRSAEFHPNVQSAKDANAVKNYITKEGDYCESGKYKVSGGSKSNKDDVYHNAVNA FT ATAGEALDIIRAGDPKTFIVNYHNVKANVERLFIKPPLPWVPPFQLSSFNNVPSDLQEW FT TDDYFGRGAAARPDRPISIVVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNDVEY FT NVIDDVAPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDF FT LNKEENASLRAWTRKNAKFIFLHAPLYQSTAQNSQEESYTSTTD" FT CDS complement(2036. .2398) FT /codon_start=1 FT /product="AC4" FT /protein_id="AED01994.1" FT /translation="MKFCSCFGTCHGLSSSRRTSESLESSTPMGSPISTVLFNSPASPT FT SRMLGFSTSLTPDGLPNFTQMCNRPRTPTPSKITSPKRVIIVNPANIKCLGVPSPIKMT FT STTTLSMQQLQERLST" XX SQ Sequence 2610 BP; 697 A; 587 C; 625 G; 701 T; 0 other; jf756671 Length: 2610 04-MAY-2011 Type: N Check: 2092 .. 1 accggatggc cgcgtttttt tggtgtcctc tatcccggcc caggcccaaa 51 cgcatttagt tttatccggg accacacaca tcaactactg ctgaccaatc 101 acatcactgc tgacgaggct atataacttt gggcctactt ggctgataag 151 ttgtggtccc tatatattta aagtaattga cattattcga tatctttaat 201 ttgaaatgcc taagcgagat gccccatggc gattaatggc ggggacctcc 251 caggtcagtc gtaatgtcaa ttattcgccc cgtggtggtc ctaaaataga 301 caaggcctct tcatgggtga acaggcccat gtacaggaag cccaggatct 351 atcgcatgta tagaggccca gatgttccga agggatgtga agggccttgt 401 aaggtccagt catacgagtc tcgccatgac gtttcccatg ttgggaaagt 451 gatatgtgta tccgacgtga cacggggcaa tggtattacg catcgtgtgg 501 gcaagcgttt ctgcgtcaaa tctgtgtaca ttctagggaa gatctggatg 551 gatgagacca tcaagttgaa gaaccacacg aatagcgtaa tgttctggtt 601 ggtgcgagat cgtcgaccat atagctctcc tatggatttt ggccaagtgt 651 tcaacatgtt cgacaacgaa cccagtacag ctaccgtgaa gaacgatctc 701 cgcgatcgct tccaagtgat gcacaagttt tacgcgaagg tcactggtgg 751 acaatatgcg agcaacgagc agtcgatcgt caagcgtttt tggaaggtca 801 acaactatgt ggtgtataac caccaagagg cagggaaata cgagaatcat 851 acagagaacg cgttattatt gtacatggca tgtactcatg cctctaatcc 901 tgtatatgcg acgttgaaaa ttcggatcta tttttatgat tcgataacaa 951 attaataaaa attgaatttt atttcatgat tctcgagtac atcatttaca 1001 tatgagcgat cagttgcgaa acgaacagcc ctaattacat gattaagacc 1051 gacgacaccc aattgatcta aatacattaa aactaaatgc ctgaatctac 1101 ttaaataagt catcccagaa gctcgaatcg atgtcgtcca gacttggaag 1151 ttcaggaaag ctttgcgtag attcagtgcc ctcctgaggt tgtaattgaa 1201 ccggatctgg atgtggtata tccggagcga cgtgtatatc gggtcctcga 1251 ccctgatgat cttgaaatag aggggatttg gaacctccca aataaaaacg 1301 gaattctctg cctgagacac agtgatgaac tccccggtgc ttaaatccat 1351 aatctgcaca gtcaatatgg agaaatatgg aacagccgca gttcaagtca 1401 atccgtcgtc gacgtatagc tctcctcttg gctattctgt gctgtgcttt 1451 gatagagggg ggcgtggagg aagatgaatt tagcattctt gcgtgtccaa 1501 gctctcaaag atgcattctc ctctttgttg aggaagtctt tatagctagc 1551 cccctcgcct ggattgcaca gcacgattga tggtatcccg cctttaattt 1601 gaaccggctt tccatattta cagttggact gccagtccct ttgggcccca 1651 atcaactctt tccagtgctt taactttaga taatgcggag cgacatcatc 1701 aatgacgttg tactccacgt catttgagta aaccctagaa ttgaaatcga 1751 gatgcccact aagataatta tgtgggccta aagctctagc ccacatggtc 1801 ttacccgttc gactatcccc ctcgactacg atactaatag gtctatctgg 1851 ccgcgcagcg gcaccccttc caaaataatc atcagtccac tcttgcaaat 1901 cagacgggac attgttaaat gacgacagct gaaatggggg aacccaagga 1951 aggggtggtt taataaagag gcgctcgacg ttagctttga cattatgata 2001 attcacgatg aacgtcttcg gatcaccagc ccttattatg tcgagagcct 2051 ctcctgcagt tgctgcattg acagcgttgt ggtagacgtc atctttattg 2101 gacttggaac ccccagacac tttatatttg ccggattcac aataatcacc 2151 ctctttggtg atgtaatttt tgacggcgtt ggcgtccttg gccgattgca 2201 catttgggtg aaattcggca gaccgtctgg ggtgagtgag gttgaaaaac 2251 ctagcatcct tgatgttgga cttgccggag agttgaataa gacagtggag 2301 atgggggaac ccatcggcgt ggagctctcg agcgactcgg atgtacgtcg 2351 gcttgacgac agcccatggc aagtcccgaa gcaactgcag aacttcatct 2401 ttgggaatat cgcaccgggg ataagtgagg aatatatttt tggccgttag 2451 gcgaaatgaa ttagaattcc gtggcataat tgaaaatata agccaggaca 2501 ccagggggag tcctctcaaa aacctatttt tcgtggtgtc ctggtgtccc 2551 atttatacta aaagcctcta ggacaccagg ggggtacgtg gcggccatcc 2601 gtataatatt