Sequence of DPV Euphorbia yellow mosaic virus

Euphorbia yellow mosaic virus - Goias [Brazil:GO:Itaberai:5082A:2007] segment DNA-A, complete sequence.

ACC No: JF756671

Dated: 2011-05-04 | Length: 2610 | CRC: 1552163279

                
ID   JF756671; SV 1; linear; genomic DNA; STD; VRL; 2610 BP.
XX
AC   JF756671;
XX
DT   04-MAY-2011 (Rel. 108, Created)
DT   04-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Euphorbia yellow mosaic virus - Goias [Brazil:GO:Itaberai:5082A:2007]
DE   segment DNA-A, complete sequence.
XX
KW   .
XX
OS   Euphorbia yellow mosaic virus - Goias [Brazil:GO:Itaberai:5082A:2007]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
XX
RN   [1]
RP   1-2610
RA   Fernandes F.R., Albuquerque L.C., Oliveira C.L., Cruz A.R.R., Rocha W.B.,
RA   Pereira T.G., Naito F.Y.B., Dias N.M., Nagata T., Faria J.C., Zerbini F.M.,
RA   Aragao F.J.L., Inoue-Nagata A.K.;
RT   "Molecular and biological characterization of a new Brazilian begomovirus,
RT   Euphorbia yellow mosaic virus (EuYMV), infecting Euphorbia heterophylla
RT   plants";
RL   Unpublished.
XX
RN   [2]
RP   1-2610
RA   Fernandes F.R., Albuquerque L.C., Oliveira C.L., Cruz A.R.R., Rocha W.B.,
RA   Pereira T.G., Naito F.Y.B., Dias N.M., Nagata T., Faria J.C., Zerbini F.M.,
RA   Aragao F.J.L., Inoue-Nagata A.K.;
RT   ;
RL   Submitted (31-MAR-2011) to the EMBL/GenBank/DDBJ databases.
RL   Phytopathology, Embrapa Vegetables, Rod. Brasilia/Anapolis BR 060 Km 09
RL   Gama - DF, Gama, Federal District 70359-970, Brazil
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2610
FT                   /organism="Euphorbia yellow mosaic virus - Goias
FT                   [Brazil:GO:Itaberai:5082A:2007]"
FT                   /segment="DNA-A"
FT                   /host="Euphorbia heterophylla"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil:Itaberai, Goias"
FT                   /collection_date="2007"
FT                   /clone="50823"
FT                   /db_xref="taxon:1016874"
FT   CDS             206. .955
FT                   /codon_start=1
FT                   /product="AV1"
FT                   /note="coat protein"
FT                   /protein_id="AED01990.1"
FT                   /translation="MPKRDAPWRLMAGTSQVSRNVNYSPRGGPKIDKASSWVNRPMYRK
FT                   PRIYRMYRGPDVPKGCEGPCKVQSYESRHDVSHVGKVICVSDVTRGNGITHRVGKRFCV
FT                   KSVYILGKIWMDETIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATVKN
FT                   DLRDRFQVMHKFYAKVTGGQYASNEQSIVKRFWKVNNYVVYNHQEAGKYENHTENALLL
FT                   YMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(952. .1350)
FT                   /codon_start=1
FT                   /product="AC3"
FT                   /note="replication enhancer protein; REn"
FT                   /protein_id="AED01993.1"
FT                   /translation="MDLSTGEFITVSQAENSVFIWEVPNPLYFKIIRVEDPIYTSLRIY
FT                   HIQIRFNYNLRRALNLRKAFLNFQVWTTSIRASGMTYLSRFRHLVLMYLDQLGVVGLNH
FT                   VIRAVRFATDRSYVNDVLENHEIKFNFY"
FT   CDS             complement(1097. .1486)
FT                   /codon_start=1
FT                   /product="AC2"
FT                   /note="transcriptional activator protein; TrAP"
FT                   /protein_id="AED01992.1"
FT                   /translation="MLNSSSSTPPSIKAQHRIAKRRAIRRRRIDLNCGCSIFLHIDCAD
FT                   YGFKHRGVHHCVSGREFRFYLGGSKSPLFQDHQGRGPDIHVAPDIPHPDPVQLQPQEGT
FT                   ESTQSFPELPSLDDIDSSFWDDLFK"
FT   CDS             complement(1398. .2552)
FT                   /codon_start=1
FT                   /product="AC1"
FT                   /note="replication-associated protein; Rep"
FT                   /protein_id="AED01991.1"
FT                   /translation="MGHQDTTKNRFLRGLPLVSWLIFSIMPRNSNSFRLTAKNIFLTYP
FT                   RCDIPKDEVLQLLRDLPWAVVKPTYIRVARELHADGFPHLHCLIQLSGKSNIKDARFFN
FT                   LTHPRRSAEFHPNVQSAKDANAVKNYITKEGDYCESGKYKVSGGSKSNKDDVYHNAVNA
FT                   ATAGEALDIIRAGDPKTFIVNYHNVKANVERLFIKPPLPWVPPFQLSSFNNVPSDLQEW
FT                   TDDYFGRGAAARPDRPISIVVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNDVEY
FT                   NVIDDVAPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDF
FT                   LNKEENASLRAWTRKNAKFIFLHAPLYQSTAQNSQEESYTSTTD"
FT   CDS             complement(2036. .2398)
FT                   /codon_start=1
FT                   /product="AC4"
FT                   /protein_id="AED01994.1"
FT                   /translation="MKFCSCFGTCHGLSSSRRTSESLESSTPMGSPISTVLFNSPASPT
FT                   SRMLGFSTSLTPDGLPNFTQMCNRPRTPTPSKITSPKRVIIVNPANIKCLGVPSPIKMT
FT                   STTTLSMQQLQERLST"
XX
SQ   Sequence 2610 BP; 697 A; 587 C; 625 G; 701 T; 0 other;

jf756671 Length: 2610  04-MAY-2011  Type: N  Check: 2092  ..

       1  accggatggc cgcgtttttt tggtgtcctc tatcccggcc caggcccaaa
      51  cgcatttagt tttatccggg accacacaca tcaactactg ctgaccaatc
     101  acatcactgc tgacgaggct atataacttt gggcctactt ggctgataag
     151  ttgtggtccc tatatattta aagtaattga cattattcga tatctttaat
     201  ttgaaatgcc taagcgagat gccccatggc gattaatggc ggggacctcc
     251  caggtcagtc gtaatgtcaa ttattcgccc cgtggtggtc ctaaaataga
     301  caaggcctct tcatgggtga acaggcccat gtacaggaag cccaggatct
     351  atcgcatgta tagaggccca gatgttccga agggatgtga agggccttgt
     401  aaggtccagt catacgagtc tcgccatgac gtttcccatg ttgggaaagt
     451  gatatgtgta tccgacgtga cacggggcaa tggtattacg catcgtgtgg
     501  gcaagcgttt ctgcgtcaaa tctgtgtaca ttctagggaa gatctggatg
     551  gatgagacca tcaagttgaa gaaccacacg aatagcgtaa tgttctggtt
     601  ggtgcgagat cgtcgaccat atagctctcc tatggatttt ggccaagtgt
     651  tcaacatgtt cgacaacgaa cccagtacag ctaccgtgaa gaacgatctc
     701  cgcgatcgct tccaagtgat gcacaagttt tacgcgaagg tcactggtgg
     751  acaatatgcg agcaacgagc agtcgatcgt caagcgtttt tggaaggtca
     801  acaactatgt ggtgtataac caccaagagg cagggaaata cgagaatcat
     851  acagagaacg cgttattatt gtacatggca tgtactcatg cctctaatcc
     901  tgtatatgcg acgttgaaaa ttcggatcta tttttatgat tcgataacaa
     951  attaataaaa attgaatttt atttcatgat tctcgagtac atcatttaca
    1001  tatgagcgat cagttgcgaa acgaacagcc ctaattacat gattaagacc
    1051  gacgacaccc aattgatcta aatacattaa aactaaatgc ctgaatctac
    1101  ttaaataagt catcccagaa gctcgaatcg atgtcgtcca gacttggaag
    1151  ttcaggaaag ctttgcgtag attcagtgcc ctcctgaggt tgtaattgaa
    1201  ccggatctgg atgtggtata tccggagcga cgtgtatatc gggtcctcga
    1251  ccctgatgat cttgaaatag aggggatttg gaacctccca aataaaaacg
    1301  gaattctctg cctgagacac agtgatgaac tccccggtgc ttaaatccat
    1351  aatctgcaca gtcaatatgg agaaatatgg aacagccgca gttcaagtca
    1401  atccgtcgtc gacgtatagc tctcctcttg gctattctgt gctgtgcttt
    1451  gatagagggg ggcgtggagg aagatgaatt tagcattctt gcgtgtccaa
    1501  gctctcaaag atgcattctc ctctttgttg aggaagtctt tatagctagc
    1551  cccctcgcct ggattgcaca gcacgattga tggtatcccg cctttaattt
    1601  gaaccggctt tccatattta cagttggact gccagtccct ttgggcccca
    1651  atcaactctt tccagtgctt taactttaga taatgcggag cgacatcatc
    1701  aatgacgttg tactccacgt catttgagta aaccctagaa ttgaaatcga
    1751  gatgcccact aagataatta tgtgggccta aagctctagc ccacatggtc
    1801  ttacccgttc gactatcccc ctcgactacg atactaatag gtctatctgg
    1851  ccgcgcagcg gcaccccttc caaaataatc atcagtccac tcttgcaaat
    1901  cagacgggac attgttaaat gacgacagct gaaatggggg aacccaagga
    1951  aggggtggtt taataaagag gcgctcgacg ttagctttga cattatgata
    2001  attcacgatg aacgtcttcg gatcaccagc ccttattatg tcgagagcct
    2051  ctcctgcagt tgctgcattg acagcgttgt ggtagacgtc atctttattg
    2101  gacttggaac ccccagacac tttatatttg ccggattcac aataatcacc
    2151  ctctttggtg atgtaatttt tgacggcgtt ggcgtccttg gccgattgca
    2201  catttgggtg aaattcggca gaccgtctgg ggtgagtgag gttgaaaaac
    2251  ctagcatcct tgatgttgga cttgccggag agttgaataa gacagtggag
    2301  atgggggaac ccatcggcgt ggagctctcg agcgactcgg atgtacgtcg
    2351  gcttgacgac agcccatggc aagtcccgaa gcaactgcag aacttcatct
    2401  ttgggaatat cgcaccgggg ataagtgagg aatatatttt tggccgttag
    2451  gcgaaatgaa ttagaattcc gtggcataat tgaaaatata agccaggaca
    2501  ccagggggag tcctctcaaa aacctatttt tcgtggtgtc ctggtgtccc
    2551  atttatacta aaagcctcta ggacaccagg ggggtacgtg gcggccatcc
    2601  gtataatatt