Sequence of DPV Spissistilus festinus reovirus
Spissistilus festinus reovirus strain Type segment 1, complete sequence.
ACC No: JF773382
Dated: 2012-02-05 | Length: 4012 | CRC: 1346333750
ID JF773382; SV 1; linear; genomic RNA; STD; VRL; 4012 BP. XX AC JF773382; XX DT 05-FEB-2012 (Rel. 111, Created) DT 05-FEB-2012 (Rel. 111, Last updated, Version 1) XX DE Spissistilus festinus reovirus strain Type segment 1, complete sequence. XX KW . XX OS Spissistilus festinus reovirus OC Viruses; dsRNA viruses; Reoviridae; unclassified Reoviridae. XX RN [1] RP 1-4012 RX PUBMED; 22142476. RA Spear A., Sisterson M.S., Stenger D.C.; RT "Reovirus genomes from plant-feeding insects represent a newly discovered RT lineage within the family Reoviridae"; RL Virus Res. 163:503-511(2011). XX RN [2] RP 1-4012 RA Spear A., Stenger D.C.; RT ; RL Submitted (04-APR-2011) to the INSDC. RL San Joaquin Valley Agricultural Sciences Center, USDA-ARS, 9611 S. RL Riverbend Ave, Parlier, CA 93648, USA XX CC GenBank Accession Numbers JF773382-JF773391 represent the complete CC genome of Spissistilus festinus reovirus strain Type. XX FH Key Location/Qualifiers FH FT source 1. .4012 FT /organism="Spissistilus festinus reovirus" FT /segment="1" FT /host="Spissistilus festinus" FT /strain="Type" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="2009" FT /db_xref="taxon:1004049" FT gene 1. .4012 FT /gene="P1" FT mRNA 1. .4012 FT /gene="P1" FT /product="P1" FT CDS 14. .3946 FT /codon_start=1 FT /gene="P1" FT /product="structural protein" FT /protein_id="AEC32487.1" FT /translation="MDRRDLTLLLGGATESTPEDNTLLETITNVINFLFNDEPTETTVT FT SIRKRLSDFNRYRKLSSHLAAIYNLAPLHPIATTFTTRVSFNAYLTDLTPQASLALWYD FT LFGLQIVLQNELFGESPRSVGFQVDVSLYAELSDVFKRRPCSPSILERSRNELYQRRYG FT IGLPHYHFPKVVNMRLTFTPTRVSPISSVYGITLICEVGAGRDDDVLIFETNVLVEDDA FT PHVITLNHCLRASYDQSALSELQPHVFGTQLPQIVSEIQNQYVEVYCWDGVLRITDEGM FT MTPAVAANLLYFSNTQKLTAQCLGCPAILDVDDDLVGFKVFFTPSSLSVPSTVDKKIKF FT SDAHGYVPRPFSMVYDQYLCRKQMFDVLSLLCLYQLASLWSSYFRGSEGEPVKKKKGEG FT FLVGLLDGVSGNMAALTDLAKRSIQYNACNVRAEAGKVCGVPVATSIARRISSKLVRDG FT HSMSDKNVFHFAPVGYTGISEVKNRAYFVPESSFPPCPPGGTNIYKVKMTANVNLDSIA FT ERVSVFEDENVQVFLLLQRHFKKDAMSDGEVVYTDDMSGLVLSLPTLTDFEFVGRVPPA FT ADFIDILSKNETSSDMSWFKSVVGVSADSITVTGVRCVVITKKAVIAPTLDADHDNTIT FT CTVAGAGLRQTTLTFSAWKALELTTEDKVRYHGVTCDVPITEAMVESYRDVVLWHQPFS FT FPKQKGAIRRTYTSYFEPNAQRHYTVMNISQSLHHPAHPTDCYLIEARCELGQVNVEYT FT RTVDLSSSRTYFRGSSCTSNHDLNRAFRTWVRDNAPCSIHKNGLLPGTFMGKVESISLN FT LLVPYSDVVPLSAIAWITALDDITFQLALIGDVAANALALASANRDRLDALERAQADAE FT KWAMIAFAIDLVAAVVPGGPVLAALGAIIAKIGERFSRLGPRLIGLSIYLSKVGNAFKA FT LIHEKGLDDISARMSRVSSESSILWKLTRKKNREDVSGESTDLLDKSLNFTLVDPTEYI FT KFNIITNYSSAVTNHPTKDVLNILKESSHLDDTIASSLSVMHRPLQVLPPKLRDIAHWA FT ATHRVEKASQRKLSKWLNDTRHPTHSYVTLTEDIPDLARGTLRKRLTMIGVGDPNPGGK FT PVGDKGAGIGSYFIEFDVLGVHQSTKSAVLRPRSWRDIGYDDTDLSNIYRTMFGMSHYD FT NKLTLDDAWGAIIDRTKDRILYDTRVTSIPLSYTRADQIRDIARNFSWEYNLLSNNCQN FT FAHGLYEYARGGVKPSWLSDGEMSAVFKNQIDALHSKLTWDEVSLDDLSRPLPPSVTSA FT ASDTQPLIPSFGLSVRKDERPSGSGG" XX SQ Sequence 4012 BP; 989 A; 951 C; 1014 G; 1058 T; 0 other; jf773382 Length: 4012 05-FEB-2012 Type: N Check: 3882 .. 1 agagaaccac ccgatggaca gacgagatct caccctcttg ctcggaggag 51 cgactgaatc cacgccggaa gacaacacgt tgttagagac tatcactaat 101 gttattaact tcctatttaa cgacgaacca accgaaacaa cggtcacatc 151 catacggaaa cgccttagtg attttaatcg ttatcgtaag ctatcttccc 201 atttagcagc tatttacaat ctcgcacctt tgcatccaat agccactacg 251 tttaccaccc gcgtttcctt caacgcgtat ctaactgatc taactcccca 301 ggctagctta gctttgtggt acgacttgtt tggcctgcag attgttctcc 351 agaatgagtt gttcggagag tcgcctagaa gtgtcgggtt tcaggtcgac 401 gtcagcttat acgccgaact ctcagatgta ttcaaaaggc gcccgtgttc 451 tccctccatt cttgagcggt cgcgaaatga gttataccaa cgacggtatg 501 ggattggtct tcctcactac catttcccaa aggttgtcaa catgaggctt 551 accttcactc ctactcgagt gtcccctatc tcctcagtgt atggcattac 601 tttgatctgt gaggtaggag cggggaggga tgatgacgta ctaatcttcg 651 aaaccaatgt gttagtagag gatgacgccc ctcacgttat tacgttgaat 701 cactgtctta gagcgtcata tgatcaaagt gcgctttctg agctacaacc 751 ccatgtgttt gggactcagc tgccccagat agtctctgaa atccaaaacc 801 agtatgtgga ggtgtactgt tgggacgggg tacttaggat cactgatgaa 851 gggatgatga ctcctgctgt tgcagctaac ctactgtatt tctccaacac 901 ccaaaaactg acggctcaat gcttgggatg tccagcaata ttggacgtag 951 atgatgatct agttgggttt aaggttttct tcacgccctc ttccctctct 1001 gtgccttcca ctgtcgataa gaagattaaa ttcagtgatg cccacgggta 1051 tgtgccacgt ccctttagta tggtgtatga ccaatacctg tgtaggaaac 1101 agatgtttga cgtactgtcg ttgctatgcc tataccagct ggcctcgcta 1151 tggtccagtt attttagggg gagtgagggg gagccagtga agaagaagaa 1201 aggggaaggt tttctagtgg ggttgctgga tggagtgagc gggaatatgg 1251 cggcgcttac tgatctagcg aagcggtcaa tacaatataa cgcttgtaac 1301 gtcagagctg aggcagggaa agtttgtggg gtcccagttg ccacgagcat 1351 tgcgaggagg atttctagta aattagtacg agatggacat tcaatgtcag 1401 acaagaatgt cttccatttc gcccccgttg gctatactgg tatcagtgaa 1451 gtcaagaacc gagcgtattt cgttccagaa agttcttttc cgccctgccc 1501 acctgggggg accaatattt acaaggtaaa gatgactgct aacgttaatc 1551 tggacagcat tgctgagcga gttagcgtgt ttgaagacga aaacgtccaa 1601 gttttcttac tattgcaacg tcatttcaaa aaggacgcga tgagcgatgg 1651 tgaggtggtt tacactgatg acatgtctgg acttgtgctt tccttgccca 1701 cactgacaga cttcgagttt gtggggagag tgccacctgc tgcggatttc 1751 atcgacatac ttagtaagaa tgagacttca tcagacatgt catggttcaa 1801 gagtgttgtt ggagtaagcg ccgattcaat cacggttacg ggtgtgcggt 1851 gcgtagtgat aaccaagaag gctgtgattg ccccaaccct tgatgctgat 1901 catgataaca caatcacttg tacagtggcc ggggcaggac tacgtcaaac 1951 cacgctgact tttagcgcgt ggaaggcgtt agagttgacg acagaggaca 2001 aagtgcgcta tcacggtgtt acatgcgacg ttcctattac tgaagcgatg 2051 gtggagagct atcgtgatgt agtcctttgg catcagcctt tctcattccc 2101 aaagcaaaag ggggctattc gaagaaccta cacgtcgtac tttgagccca 2151 acgcgcaaag acattatacg gtcatgaaca tttctcaaag tctgcaccat 2201 cctgctcacc ctactgactg ttaccttatt gaggctaggt gtgaacttgg 2251 gcaagtcaac gtcgagtaca ctaggaccgt ggatctatcc agctcacgaa 2301 catattttcg tggatccagt tgtacttcca accatgattt gaatcgggct 2351 ttccgcacat gggtgaggga caatgcgccg tgctctattc acaagaacgg 2401 cctactccct gggacattta tggggaaggt ggaatctata tcactaaacc 2451 ttttagtccc ttactctgac gtggttcctt tatccgccat cgcatggatc 2501 acagcactgg acgacattac cttccagtta gcgttaattg gagacgtcgc 2551 cgccaacgct ttagccctag ctagcgccaa tagggacagg ttagacgctc 2601 ttgaacgcgc tcaggcggac gcggaaaaat gggcaatgat tgcgtttgct 2651 atagatttgg ttgccgctgt cgttccagga ggtccagtat tggctgctct 2701 aggggctatc atcgctaaga tcggtgagag attttctagg cttgggccca 2751 ggctgattgg attgtcaata tacctttcca aggtagggaa cgcgttcaag 2801 gcactcatcc acgagaaagg ccttgatgac atttcagcgc gtatgtctcg 2851 agtctcttcg gagtcatcta tattgtggaa gttgacgagg aagaagaata 2901 gagaggatgt cagcggtgaa tcgacagact tgctggataa aagtctaaat 2951 tttacactcg tggacccgac tgagtacatt aagtttaaca ttatcaccaa 3001 ctactcgtct gctgtgacta accaccctac caaggatgtg ctgaacattc 3051 tgaaggaatc ctcacatctc gacgacacta ttgcttcctc tctttccgtt 3101 atgcaccgac ccttacaagt tctccctccg aagttgcgtg acatcgctca 3151 ttgggcagct actcacaggg tggagaaagc gtctcagcgc aagctgtcga 3201 agtggcttaa cgacacgaga caccccaccc actcgtacgt taccctaacc 3251 gaagacattc ctgaccttgc aagggggacg cttcgaaagc gacttacgat 3301 gattggtgtt ggtgacccga atccaggcgg taagcccgtg ggggacaagg 3351 gagcaggtat aggctcatat ttcattgagt tcgatgttct cggagtgcat 3401 caatctacca agtctgcagt tctgcggccc cggtcttgga gagatattgg 3451 ctacgatgac actgaccttt ctaacatata tcggactatg tttgggatga 3501 gccattacga taataaactc acgctggacg acgcttgggg agcaatcatc 3551 gataggacaa aggatcgtat tctctacgac actagggtca cttcgattcc 3601 cttgtcctac acccgagcgg accaaatccg ggacatcgcc cgtaactttt 3651 cctgggagta caatctgttg tcaaataatt gtcaaaattt cgcccatggc 3701 ttgtatgagt acgcccgtgg cggagtgaag ccttcatggt tgtccgatgg 3751 ggaaatgtcg gccgttttca agaatcagat tgatgctctc cactcaaaac 3801 taacatggga tgaagtatct ctcgatgact tgtctcggcc cctccccccg 3851 tccgtgacta gcgctgcatc agatacgcag ccacttatac catcttttgg 3901 gttatcagtt aggaaggacg aacggcccag cgggagtggc ggatagatct 3951 gttcgtgctg tgcgctggtg agcgtccctg gagaagggta gcacaagggt 4001 ggtcgatgtt gt