Sequence of DPV Grapevine leafroll-associated virus 1

Grapevine leafroll-associated virus 1 isolate WALM1 p24 gene, partial cds.

ACC No: JF811763

Dated: 2011-12-02 | Length: 625 | CRC: -2013943528

                
ID   JF811763; SV 1; linear; genomic RNA; STD; VRL; 625 BP.
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AC   JF811763;
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DT   02-DEC-2011 (Rel. 111, Created)
DT   02-DEC-2011 (Rel. 111, Last updated, Version 1)
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DE   Grapevine leafroll-associated virus 1 isolate WALM1 p24 gene, partial cds.
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KW   .
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OS   Grapevine leafroll-associated virus 1
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Ampelovirus.
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RN   [1]
RP   1-625
RX   PUBMED; 21830956.
RA   Alabi O.J., Al Rwahnih M., Karthikeyan G., Poojari S., Fuchs M.,
RA   Rowhani A., Naidu R.A.;
RT   "Grapevine leafroll-associated virus 1 Occurs as Genetically Diverse
RT   Populations";
RL   Phytopathology 101(12):1446-1456(2011).
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RN   [2]
RP   1-625
RA   Alabi O.J., Rwahnih M.A., Karthikeyan G., Poojari S., Fuchs M., Rowhani A.,
RA   Naidu R.A.;
RT   ;
RL   Submitted (13-APR-2011) to the INSDC.
RL   Department of Plant Pathology, Washington State University Irrigated
RL   Agriculture Research and Extension Center, 24106 N. Bunn Rd., Prosser, WA
RL   99350, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .625
FT                   /organism="Grapevine leafroll-associated virus 1"
FT                   /host="Vitis vinifera cv. Lemberger"
FT                   /isolate="WALM1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Washington"
FT                   /db_xref="taxon:47985"
FT   CDS             1. .>625
FT                   /codon_start=1
FT                   /product="p24"
FT                   /note="ORF9"
FT                   /protein_id="AET98931.1"
FT                   /translation="MASLIPKYVGSFSELCAHIIEISNADSVHLLYEALKLNSRWLDLP
FT                   FSTFVEETQKELEQTPYGWQLRFARENTVAEIDTKFLRKMHGMYLREVSILKDIRKALH
FT                   LILVDTKLNDASVNGLARGRGKKRYSRSLLKGMMRAIRELQTNLDKIGVSSGAEVKLTA
FT                   IAISLLAEDSHSSPKDVILRVNRLSSYYLLKDNVTFHFFGAIASN"
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SQ   Sequence 625 BP; 181 A; 121 C; 157 G; 166 T; 0 other;

jf811763 Length: 625  02-DEC-2011  Type: N  Check: 1675  ..

       1  atggcgtcac ttatacctaa gtatgtcggc agcttctctg aactttgcgc
      51  tcacatcatc gaaatttcga acgcggatag cgttcattta ctctatgaag
     101  cgctaaaatt gaactctcga tggttagatt taccattctc gacatttgtg
     151  gaggagacgc aaaaggaatt agagcagacg ccgtacggtt ggcagttaag
     201  gttcgctcgt gagaacacgg tggccgaaat tgataccaag ttcttgcgta
     251  agatgcacgg aatgtactta cgcgaggtaa gtatactcaa agatatacgc
     301  aaggcgctac atttgatatt agttgacacc aagttgaatg acgctagcgt
     351  gaacggtcta gctcggggca gagggaagaa acgttactct cgttcgttgc
     401  tgaaagggat gatgagagcg atacgagaac ttcaaacaaa tttagacaaa
     451  attggggtga gctcaggagc tgaagtcaaa ctaacagcta tagcgatatc
     501  gctgttggct gaagacagtc acagtagccc gaaagacgtt attttgaggg
     551  ttaataggct ttcgtcatat tatttgctca aagataatgt cacgtttcac
     601  ttcttcgggg ctatcgctag caatt