Sequence of DPV Tomato leaf curl Sudan virus
Tomato leaf curl Sudan virus isolate ToLCSDV-Ye:DI-1, complete genome.
ACC No: JF919723
Dated: 2012-12-12 | Length: 1237 | CRC: -2136223959
ID JF919723; SV 1; circular; genomic DNA; STD; VRL; 1237 BP. XX AC JF919723; XX DT 01-JUN-2012 (Rel. 113, Created) DT 12-DEC-2012 (Rel. 115, Last updated, Version 2) XX DE Tomato leaf curl Sudan virus isolate ToLCSDV-Ye:DI-1, complete genome. XX KW . XX OS Tomato leaf curl Sudan virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1237 RX DOI; 10.1016/j.virusres.2012.07.014. RX PUBMED; 22841489. RA Idris A.M., Abdullah N.M., Brown J.K.; RT "Leaf curl diseases of two solanaceous species in Southwest Arabia are RT caused by a monopartite begomovirus evolutionarily most closely related to RT a species from the Nile Basin and unique suite of betasatellites"; RL Virus Res. 169(1):296-300(2012). XX RN [2] RP 1-1237 RA Idris A.M., Brown J.K.; RT ; RL Submitted (06-MAY-2011) to the INSDC. RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA XX FH Key Location/Qualifiers FH FT source 1. .1237 FT /organism="Tomato leaf curl Sudan virus" FT /host="tomato" FT /isolate="ToLCSDV-Ye:DI-1" FT /mol_type="genomic DNA" FT /collection_date="2005" FT /note="defective interfering virus" FT /db_xref="taxon:270146" FT CDS complement(618. .920) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I3QBA6" FT /protein_id="AFI56581.1" FT /translation="MGSHISMCLYSSKANSSAKISDSSTWYPQAGQHISIQTFRELNQV FT PTSSPTSIRTETLSTGESFRSMEGLQEGVNNLQTMLTPQQLTQAVSQRLLEYLGN" XX SQ Sequence 1237 BP; 332 A; 257 C; 255 G; 393 T; 0 other; jf919723 Length: 1237 12-DEC-2012 Type: N Check: 4522 .. 1 accggatggc cgcgcccctg cttttatgtg gtccccatca cgtgggttcc 51 acacatgtcg ctatcatcca atgaaattca agcctgaaac gttaattaat 101 tgtccttttg tctttatata cttggtcccc aagtagtttc tcttgcaata 151 tgtgggaccc tctgattaac gagtttcctg aatcagttca cggatttcgt 201 tgtatgctag ccataaaata tttgcaggcc gttgagcaaa catacgagcc 251 caatactctg ggccacgatt taattaggga tcttatttct gttataaggg 301 cccgtgacac catgcattat tactgtaaac ttttggactc aggtccagat 351 gtccacacaa ataattgtgt ggtcctagag acctggccca cattgttttg 401 ccggttctac tatcaccctc gatgacaata ctattaggtc tccatggccg 451 cgcagcggaa ggcatgacgt tctccgacac ccaaacctca agttcctctg 501 gaacttgatt aaaagaagaa gatagaaaag gagaaatata cggagccgga 551 ggctcctgaa aaatcctatc taaattacta tttaaattat gaaattgtaa 601 aatataatct ctgggagcta attccctaag tactctaaga gcctctgact 651 tactgcctga gttaattgct gcggcgtaag catcgtttgc agattgttga 701 ccccctcttg cagaccttcc atcgatctga aactctcccc agtcgagagt 751 gtctccgtcc ttatcgatgt aggacttgac gtcggaactt gatttagctc 801 cctgaatgtt tggatggaaa tgtgctgccc tgcttgggga taccaggtcg 851 aagaatcgct gattttggca cttgaatttg ccttcgaact gtataagcac 901 atggagatgt ggctccccat tctcgtgaag ttctctgcaa actttgatat 951 attttttatt tgttggggta tttatgtttt ttaattggga aagtgcctct 1001 tcttttgtta aggagcattg aggatatgta aggaaataat ttttgcaatt 1051 tatttgaaaa cgcttgggag gagccatatg gtcaatgagt accgattgac 1101 caagatttca tttatccctt gtatatcggt actcaatata tagtgagtac 1151 caaatggcat attggtaatt atgtaaaggt acatttattt tcaaaattta 1201 aaattgaaat tcataaagcg gccatccgta taatatt