Sequence of DPV Banana bunchy top virus
Banana bunchy top virus isolate TO114 segment C, complete sequence.
ACC No: JF957673
Dated: 2012-04-18 | Length: 1018 | CRC: -1100386485
ID JF957673; SV 1; circular; genomic DNA; STD; VRL; 1018 BP. XX AC JF957673; XX DT 25-DEC-2011 (Rel. 111, Created) DT 18-APR-2012 (Rel. 112, Last updated, Version 2) XX DE Banana bunchy top virus isolate TO114 segment C, complete sequence. XX KW . XX OS Banana bunchy top virus OC Viruses; ssDNA viruses; Nanoviridae; Babuvirus. XX RN [1] RP 1-1018 RX PUBMED; 22278830. RA Stainton D., Kraberger S., Walters M., Wiltshire E.J., Rosario K., RA Halafihi M., Lolohea S., Katoa I., Faitua T.H., Aholelei W., Taufa L., RA Thomas J.E., Collings D.A., Martin D.P., Varsani A.; RT "Evidence of inter-component recombination, intra-component recombination RT and reassortment in banana bunchy top virus"; RL J. Gen. Virol. 93(5):1103-1119(2012). XX RN [2] RP 1-1018 RA Varsani A., Stainton D., Kraberger S., Walters M., Wiltshire E., RA Marinov M., Rosario K., Lolohea S., Halafihi M., Katoa I., Faitua T.H., RA Aholelei W., Taufa L., Thomas J.E., Collings D., Martin D.P.; RT ; RL Submitted (12-MAY-2011) to the INSDC. RL School of Biological Sciences, University of Canterbury, Private Bag 4800, RL Christchurch 8140, New Zealand XX FH Key Location/Qualifiers FH FT source 1. .1018 FT /organism="Banana bunchy top virus" FT /segment="C" FT /host="banana" FT /isolate="TO114" FT /mol_type="genomic DNA" FT /country="Tonga" FT /lat_lon="21.21 S 175.2 W" FT /collection_date="Apr-2010" FT /db_xref="taxon:12585" FT CDS 492. .710 FT /codon_start=1 FT /product="cell cycle link protein" FT /db_xref="UniProtKB/TrEMBL:G9E2Q4" FT /protein_id="AEL32407.1" FT /translation="MVFFYHEYLEELGGDYSVYQDLYCDEVLSSSSTEEEDVGVIYRNV FT IMASTQEKFSWSDCQKIVISDYDVTLL" XX SQ Sequence 1018 BP; 344 A; 160 C; 233 G; 281 T; 0 other; jf957673 Length: 1018 18-APR-2012 Type: N Check: 6801 .. 1 tattaccccc agcgctcagg acgggacatc acgtgcaact aacagacgca 51 cgtgagaatg cagtagcttg cagcgaaaga tagacgtcaa catcaataaa 101 gaagaaggaa tattctttgc ttcggaacga agcaaagggt atagatattt 151 gttcgagatg cgaaaatgga ggctatttaa acctgatggt attgtgattt 201 ccgaaatcac tcgtcggaag agaaatggag ttctgggaat cgtctgccat 251 gcctgacgat gtgaagagag agattaagga aatatattgg gaagatcgga 301 agaaacttct gttctgtcag aagttgaaga gctatgtcag aaggattctt 351 gtttatggag atcaagagga tgcccttgcc ggagtgaagg atatgaagac 401 ttctattatt cgctatagcg aatacttgaa gaaaccatgt gtggtaattt 451 gttgtgttag caataaatca attgtgtata ggtttaacag catggtgttc 501 ttttatcatg aataccttga agaactaggt ggtgattatt cagtatatca 551 agatctctat tgtgatgagg tactctcttc ttcatcgaca gaggaagaag 601 atgtaggagt aatatatagg aatgttatca tggcatcgac acaagagaag 651 ttctcttgga gtgattgtca gaagatagtt atatcagact atgatgtaac 701 attactctaa tgtaatatcc attatcatca ataaaataat ggaatgttga 751 ttatgtattt atcataaata cataatggta tacgtatagc ataaaataca 801 ttaaccaaca tacaacacac tataaaatac aacacactat aacaaatgta 851 cgggtatctg attgggctat attaaccctt taagggccga aggcccgttt 901 aaatatgtgt tggacgaagt ccaagcacaa aaaagtaagc agaacaacgg 951 aataatatga gctggcaacg tagggtccat gtcccgagtt aatgcgccac 1001 gtaagcgctg gggcttat