Sequence of DPV Mungbean yellow mosaic India virus
Mungbean yellow mosaic India virus Indonesia isolate Brebes 2 segment DNA-A, complete sequence.
ACC No: JN368436
Dated: 2012-01-11 | Length: 2746 | CRC: 669821466
ID JN368436; SV 1; circular; genomic DNA; STD; VRL; 2746 BP.
XX
AC JN368436;
XX
DT 11-JAN-2012 (Rel. 111, Created)
DT 11-JAN-2012 (Rel. 111, Last updated, Version 1)
XX
DE Mungbean yellow mosaic India virus Indonesia isolate Brebes 2 segment
DE DNA-A, complete sequence.
XX
KW .
XX
OS Mungbean yellow mosaic India virus Indonesia
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2746
RA Tsai W.S., Shih S.L., Rauf A., Safitri R., Hidayati N., Kenyon L.;
RT "Occurrence and genetic characterization of legume-infecting begomoviruses
RT in Java, Indonesia";
RL Unpublished.
XX
RN [2]
RP 1-2746
RA Tsai W.S., Shih S.L., Rauf A., Safitri R., Hidayati N., Kenyon L.;
RT ;
RL Submitted (18-JUL-2011) to the INSDC.
RL Virology, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, Tainan,
RL Taiwan 74199, R.O.C.
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FH Key Location/Qualifiers
FH
FT source 1. .2746
FT /organism="Mungbean yellow mosaic India virus Indonesia"
FT /segment="DNA-A"
FT /host="yard long bean"
FT /isolate="Brebes 2"
FT /mol_type="genomic DNA"
FT /country="Indonesia:Brebes, Wanasari"
FT /isolation_source="diseased leaf from natural field"
FT /collection_date="2009"
FT /db_xref="taxon:1131262"
FT CDS 156. .497
FT /codon_start=1
FT /product="AV2"
FT /protein_id="AEX31077.1"
FT /translation="MWDPLLNDFPNSLHGFRCMLAIKYLQQVQENYPSNSRGFMYLTGL
FT IQILRIRNHAKADLRYSLLYPDIECTEEIELRNPAPAPCICGRCPYQPEKKALDQPTHV
FT EETSVLPTV"
FT CDS 316. .1089
FT /codon_start=1
FT /product="AV1"
FT /note="CP"
FT /protein_id="AEX31076.1"
FT /translation="MPKRTYDTAFSTPISNARRRLNFETPLLLPASAGGVPTNLKRRRW
FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQRHDIAHIGKVICISDVTRGNGITH
FT RLGKRFCIKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPYGSPMDFGQVFNMYDNE
FT PSTATVKNDLRDRYQVLRRFNATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN"
FT CDS complement(1086. .1490)
FT /codon_start=1
FT /product="AC3"
FT /protein_id="AEX31080.1"
FT /translation="MDFRTGDSITAAQLRNGVYIWEVQNPLSFKIMHHSPIQAGSRMIV
FT TKLRIMFNHGLKKALGMHKCFLDLKIYHYMKATSGMILSIFRNQLFRFLNNLGVISLAN
FT ILYFASDFLYIKLHLVEDVSFTHNVQYKLY"
FT CDS complement(1228. .1680)
FT /codon_start=1
FT /product="AC2"
FT /protein_id="AEX31079.1"
FT /translation="MKRTMLRLNSGLQRMRSSTPSKNHCSPPSIKVQHRVAKKKAIRRS
FT RIDLTCGCSYYIHINCRNYGFSHRGQHHCSSTQEWRLYLGGAKSPLFQDHAPQSNSSRV
FT QNDCHQATHNVQPRVEESTGDAQVLPGLEDLPLYEGDFWDDLIDLP"
FT CDS complement(1538. .2626)
FT /codon_start=1
FT /product="AC1"
FT /note="replication-associated protein"
FT /protein_id="AEX31078.1"
FT /translation="MPRDGRFAINARNYFLTYPKCPLTKEEALEQLLALSTPVNKKFIR
FT ICRELHEDGQPHLHVLLQFEGKQQTRNQRFFDLYSKCRSAHYHPNIQAAKSCSDIKTYM
FT EKDGDVLDHGTFQIDGRSARGGKQSANDAYAEALNCGSKLEALLILKEKAPKDFILQFH
FT NLNCNLSRIFSEPVQAYESPFTLESFNKVPSYISSWAERNVRDPAARPERPISIVIEGD
FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL
FT FSSVNQGSTQGRQEESNSTISN"
FT CDS complement(2176. .2475)
FT /codon_start=1
FT /product="AC4"
FT /protein_id="AEX31081.1"
FT /translation="MKMDSLISMFCFSSKGSNKRGTKGSSTSIPNADRHITIRTFRQLK
FT AAQTLKHTWRKTETSLIMELSKSMADQLEEVNNLPTTHTPRHSIVDQNWRPSLY"
XX
SQ Sequence 2746 BP; 742 A; 581 C; 606 G; 817 T; 0 other;
jn368436 Length: 2746 11-JAN-2012 Type: N Check: 4050 ..
1 acctgagtgc cccgcgaccg gtgtattggg gttgctttaa ctttaatgct
51 tttttggtac ccttatcttt agtcgttcaa tcaggagcgc tcctcagcgc
101 tatgttaatt caaatttgaa ttataaagca agtggacact ctgaacccac
151 taacaatgtg ggatcctttg ttgaacgact ttcccaattc attgcatgga
201 ttccggtgca tgttggctat aaagtatttg cagcaagtcc aagagaatta
251 tccatctaat tctcgtggtt ttatgtatct tacagggtta attcagatat
301 tgcgcatccg gaatcatgcc aaagcggacc tacgatacag ccttctctac
351 cccgatatcg aatgcacgga ggagattgaa cttcgaaacc ccgctcctgc
401 tccctgcatc tgcgggaggt gtccctacca acctgaaaag aaggcgttgg
451 accaaccgac ccatgtggag gaaacctcgg ttttaccgac tgtataggtc
501 ccctgatgtc cctcggggtt gcgagggacc atgtaaagtt caatcatttg
551 agcaaaggca tgatattgct cacataggca aagtgatttg catatctgac
601 gtgactagag gtaatggaat tacacatcgt cttggcaaac gattttgcat
651 caagtccgtg tacattacag gtaaggtttg gatggacgaa aacatcaagt
701 ccaagaatca cacaaacact gtgatgttca agctatgtcg tgacagacga
751 ccatatggtt cacccatgga ttttggtcaa gtgttcaaca tgtatgataa
801 cgaacctagt acagctacgg tgaagaacga tcttcgtgat cgttatcaag
851 tcttgcgaag atttaatgcc actgttacag gtggccaata tgcttgtaag
901 gaacaagcca tggtgaatcg gtttttcaaa gttaacaatt atgttgttta
951 caaccaccaa gaagcagcga agtatgagaa ccatactgag aacgcattat
1001 tattgtatat ggcatgtact catgcctcaa atcctgtgta tgcaacgctt
1051 aaaattcgga tctattttta tgattcgata ttgaattaat aaagtttgta
1101 ttgaacatta tgcgtaaagc ttacatcctc caccaggtgg agttttatat
1151 acaggaaatc cgacgcgaaa tataaaatat ttgctaagct aattacacct
1201 aaattattta gaaacctaaa taattggtta cggaagatcg ataagatcat
1251 cccagaagtc gccttcatat aatggtagat cttcaagtcc aggaagcact
1301 tgtgcatccc cagtgctttc ttcaacccgt ggttgaacat tatgcgtagc
1351 ttggtgacaa tcattctgga ccctgcttga attggactgt ggtgcatgat
1401 cttgaaagag aggggatttt gcacctccca gatatagacg ccattcctga
1451 gttgagctgc agtgatgctg tcccctgtgc gaaaatccat agttacggca
1501 gttgatatgg atgtaatagc tacacccaca tgtcaagtca attcgagatc
1551 gtcgaattgc tttcttcttg gcgaccctgt gttgaacctt gattgacgga
1601 ggagaacaat ggttctttga gggtgtagaa ctccgcattc tttgaagccc
1651 actgtttaag cgcagcattg ttctcttcat ccaagtactc tttataggag
1701 gacttgggac cagggttaca cagaaagatg gtggggatac cacctttaat
1751 tttagtgggc tttccgtact tgacgttaga ctgccagtct ctttgcgcgc
1801 ccatgaattc tttgaaatgt ttcaaataat gtggatcaac gtcatcgatg
1851 acgttgtacc atgcctcgtt agagtatgtt ttgtcgttta gatccaaatg
1901 gccgcaaaga taattatgag gacctatggc acgtgcccac atggttttac
1951 ccgtgcgact atctccctca attacaatac taataggtct ctccggccgc
2001 gcagcgggat ccctcacatt tctttcagcc catgaagaaa tgtagctcgg
2051 aaccttgtta aatgactcca gcgtaaaagg cgactcatat gcctggacag
2101 gctctgagaa aattcgagac aaattacaat ttaaattatg gaattgtaaa
2151 ataaaatcct taggagcctt ttctttcaat ataaggaggg cctccaattt
2201 tgatccacaa ttgagtgcct cggcgtatgc gtcgttggca gattgtttac
2251 ctcctcgagc tgatcggcca tcgatttgga aagttccatg atcaaggacg
2301 tctccgtctt tctccatgta tgttttaatg tctgagcagc ttttagctgc
2351 ctgaatgttc ggatggtaat gtgccgatct gcatttggaa tagaggtcga
2401 agaacctttg gttcctcgtt tgttgcttcc cttcgaactg aagcagaaca
2451 tggagatgag gctgtccatc ttcatgaagt tcgcgacaga tgcgaatgaa
2501 ttttttgtta acaggtgttg acaatgcgag aagctgttca agagcttcct
2551 cttttgtaag aggacatttg ggatatgtca agaaatagtt tcttgcgttt
2601 attgcaaaac gaccatccct aggcatattt gaagtcgttt ttgtatcggt
2651 gtacaccgat tgcttctcta cccccctatc ggtgtatcgg tgtactatat
2701 atactagagc tattaaaagc ccataggggc actcagctat aatatt