Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate P60 p23 gene, complete cds.
ACC No: JN384024
Dated: 2012-11-09 | Length: 633 | CRC: 1166899715
ID JN384024; SV 1; linear; genomic RNA; STD; VRL; 633 BP. XX AC JN384024; XX DT 01-JUN-2012 (Rel. 113, Created) DT 09-NOV-2012 (Rel. 114, Last updated, Version 2) XX DE Citrus tristeza virus isolate P60 p23 gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-633 RX PUBMED; 22305960. RA Licciardello G., Raspagliesi D., Bar-Joseph M., Catara A.; RT "Characterization of isolates of Citrus tristeza virus by sequential RT analyses of enzyme immunoassays and capillary electrophoresis-single-strand RT conformation polymorphisms"; RL J. Virol. Methods 181(2):139-147(2012). XX RN [2] RA Licciardello G., Raspagliesi D., Bar Joseph M., Catara A.; RT "Sequential ELISA/CE-SSCP: a novel method for rapid characterization of RT naturally spreading citrus tristeza virus isolates"; RL Unpublished. XX RN [3] RP 1-633 RA Licciardello G., Raspagliesi D., Catara A.; RT ; RL Submitted (22-JUL-2011) to the INSDC. RL Parco Scientifico e Tecnologico della Sicilia s.c.p.a., ZI Blocco Palma I, RL Str.le V. Lancia 57, Catania, Catania 95121, Italy XX FH Key Location/Qualifiers FH FT source 1. .633 FT /organism="Citrus tristeza virus" FT /host="sweet orange" FT /isolate="P60" FT /mol_type="genomic RNA" FT /country="Italy:Sicily" FT /db_xref="taxon:12162" FT CDS 1. .630 FT /codon_start=1 FT /product="p23" FT /protein_id="AEX56594.1" FT /translation="MDDTSGQTFVSVNLSDESNTASTKVENVKSEADRLEFLRKMNPFI FT VDALVRKTNYQGARFRARIIGVCVDCGRKHDKALKTERKCKVNNTQSQNEVAHMLMHDP FT VKYLNKRKARAFSNAEMFAIELVSYTKERQLAVDLAAEREKTRLARRHPIRSPEETPEH FT YKFGMTAKAMLPDINAVDVGDNEETSSEYPVSLSVSGGVLREHHFI" XX SQ Sequence 633 BP; 188 A; 126 C; 165 G; 154 T; 0 other; jn384024 Length: 633 09-NOV-2012 Type: N Check: 9834 .. 1 atggatgata ctagcggaca aactttcgtt tctgtgaacc tttctgacga 51 aagcaacacg gcaagcacta aagttgaaaa cgtaaaatcg gaagcggatc 101 gcttggagtt tttacgtaaa atgaatccct ttattgttga cgctctggtg 151 cggaaaacca attatcaggg tgctcgcttt cgcgcaagaa taataggagt 201 gtgcgtggat tgtggtagaa aacacgacaa ggcgctcaag actgaacgta 251 agtgtaaggt caacaatacg caatctcaga acgaggtggc gcatatgttg 301 atgcacgatc ccgttaagta tttgaacaaa agaaaggcta gagccttttc 351 taacgcagag atgtttgcga ttgaattggt ttcgtacacc aaggaaaggc 401 aattggcggt cgatttagcc gctgaaaggg agaagacgag actggctcgt 451 agacacccaa tacgttctcc ggaagaaact ccggaacatt ataaattcgg 501 tatgactgct aaggcaatgt taccggacat caacgccgta gacgttggtg 551 ataacgagga aacttcgtcg gagtacccag tgagtctgag tgtttctggc 601 ggagttctcc gtgaacacca cttcatctga ttg