Sequence of DPV Macroptilium yellow spot virus
Macroptilium yellow spot virus isolate BR:Mac5:10 segment DNA-A, complete sequence.
ACC No: JN419022
Dated: 2012-03-20 | Length: 2658 | CRC: -104096828
ID JN419022; SV 1; circular; genomic DNA; STD; VRL; 2658 BP. XX AC JN419022; XX DT 20-MAR-2012 (Rel. 112, Created) DT 20-MAR-2012 (Rel. 112, Last updated, Version 1) XX DE Macroptilium yellow spot virus isolate BR:Mac5:10 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2658 RA Silva S.J.C., Castillo-Urquiza G.P., Hora B.T.Jr., Assuncao I.P., RA Lima G.S.A., Pio-Ribeiro G., Mizubuti E.S.G., Zerbini F.M.; RT "Species diversity, phylogeny and genetic variability of begomovirus RT populations infecting leguminous weeds in northeastern Brazil"; RL Plant Pathol. 0:0-0(2011). XX RN [2] RP 1-2658 RA Silva S.J.C., Castillo-Urquiza G.P., Hora B.T.Jr., Assuncao I.P., RA Lima G.S.A., Pio-Ribeiro G., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (31-JUL-2011) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX FH Key Location/Qualifiers FH FT source 1. .2658 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Macroptilium lathyroides" FT /isolate="BR:Mac5:10" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="05-Aug-2010" FT /db_xref="taxon:1129034" FT CDS 202. .957 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /protein_id="AFD54555.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT CDS complement(954. .1352) FT /codon_start=1 FT /product="replication-enhancer protein" FT /note="REN" FT /protein_id="AFD54556.1" FT /translation="MDSRTGELITAHQAESGVYIWEISNPLYFKINQVEDPLYTTTRIY FT HVQIRFNHNLRRALALHKAYLNFQIWTISLRASGTTYLVRFKYLVMLYLERIGVISLNN FT VIRAVRFATDKSYVNYVLENHEIKFKFY" FT CDS complement(1099. .1488) FT /codon_start=1 FT /product="transactivating protein" FT /note="TRAP" FT /protein_id="AFD54557.1" FT /translation="MRNSSSSTPPSIKIQHTAAKKRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQPSGGSTIHDNQNISRPDQVQPQPQESI FT GSPQGISQFPNLDDIPESFWDDIFS" FT CDS complement(1400. .2485) FT /codon_start=1 FT /product="replication-associated protein" FT /note="REP" FT /protein_id="AFD54554.1" FT /translation="MPPARRFKIQSKNYFLTYPKCSISKEEALAQLLALDTPTNKKYIR FT VCRELHGNGEPHLHALLQFEGKFTCTNCRFFDLRHPSHSNVCHGKYESCKSSSDAKSYI FT EKDGDYVEWGAFQIDGRSARGGQQTVNDTYAKPLNASSAEEALQIIKEEQPQHFFLQHH FT NLVANAYRIFQMVPEPWTPPFPLSSFINIPEEMKAWADDYFGRSAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENTSLRQWTIHNAQFVFIN FT SPLYQDSTYSGQEESNQEKTN" FT CDS complement(2071. .2328) FT /codon_start=1 FT /product="AC4 protein" FT /note="AC4" FT /protein_id="AFD54558.1" FT /translation="MGSLISMLCCNSKVSSHARIADSSTYDIPVIQMFVMENTNHASHH FT PTPNHILRRTEITSNGVLFRSTDDLLEEVNRQLTIHMQSR" XX SQ Sequence 2658 BP; 703 A; 534 C; 605 G; 816 T; 0 other; jn419022 Length: 2658 20-MAR-2012 Type: N Check: 778 .. 1 accggatggc cgcgcgattt tttatgggcc ttttcttttg gactcgttct 51 tttggaccga gtgtatttga attaaagtca gttattttat ttggtccaat 101 gaatatgcgt ctgactagct tagatatgca caacttggta cccaagttgg 151 tggctaacgg gtatatattt taagaataac tgactacttc tttaattcag 201 aatggttaag cgggatgccc catggcgcca catggcagga acctcaaagg 251 tttcccgcaa taataactat tctcctcgtg gaggtggagg tccaaaaaac 301 aatagggcct ctgaatgggt taataggccc atgtacagaa agcccaggat 351 atatcggatg tacagaaccc ccgatgttcc tagagggtgt gaaggcccat 401 gtaaggttca gtcctttgaa cagcgtcacg atatatccca tgttggtaag 451 gttatatgta tgtctgacgt gacaagaggt aatggtatta cccatcgtgt 501 aggaaaacgt ttttgtgtta agtctgttta tattctaggt aagatatgga 551 tggacgagaa catcaagttg aagaatcaca cgaacagtgt gatgttttgg 601 ttggtcagag accgacgacc ctatggcacc ccgatggact ttggacaagt 651 gttcaacatg tttgacaacg agcccagtac tgctacggtt aagaacgatc 701 ttcgtgatcg ttttcaagtc atgcatcgat tctatgccaa agtcactggt 751 ggacagtatg cgagcaacga gcaggcaatt gtcaggcgtt tttggaaggt 801 caacaatcat gttgtctaca accatcaaga agcagggaaa tacgagaatc 851 atacggagaa cgctttacta ttgtatatgg catgtactca tgcctctaac 901 cccgtgtatg caacattaaa aattcggatc tatttttatg attcgataac 951 caattaataa aatttgaatt ttatttcatg attctccaat acataattta 1001 catatgattt gtctgttgca aatcgaacag ctcggattac attgttaagc 1051 gaaataacac ctattcgttc taagtacaac atgactaagt atttaaatct 1101 aactaaatat gtcgtcccag aagctctcag ggatatcgtc cagatttgga 1151 aattgagata tgccttgtgg agagccaatg ctctcctgag gttgtggttg 1201 aacctgatct ggacgtgata tattctggtt gtcgtgtata gtggatcctc 1251 cacttggttg atcttgaaat aaaggggatt tgatatctcc cagatataga 1301 cgccactctc tgcctgatgt gcagtgatga gttcccctgt gcgtgaatcc 1351 atggcctctg cagttgatat ggacgtatat ggagcacccg caatctatgt 1401 caattcgtct tctcctgatt gctctcttct tggccgctgt atgttgaatc 1451 ttgatagagg ggggagttga tgaagacgaa ttgcgcattg tgtatcgtcc 1501 actgtctaag tgatgtgttt tcttctttgt cgaggaatga tttatagctg 1551 gcgccctcgc caggattgca aagcacaatg catgggattc cacctttaat 1601 ttgaactggc ttgccgtatt tgcaatttga ttgccagtcc ttttgagcac 1651 ctatcaattc tttccagtgc tttaacttta gatattgcgg tgcgatgtca 1701 tctatcacgt tgtactgcac atcatttgaa tagacctttg aattgaaatc 1751 gaggtgacca ctcaagtaat tatgggaccc caatgcacgt gcccacatgg 1801 tcttgcccgt tcgagagtca ccctcgatga ttatactaat tggtctctcc 1851 ggccgcgcag cggcacttct tccgaaatag tcatctgccc aagctttcat 1901 ctcttctggg atattaatga aagaagagag tggaaatgga ggagtccatg 1951 gctccggaac catttgaaaa atacgatatg cgttagccac aagattgtga 2001 tgttggagga agaagtgctg aggttgttcc tcctttatta tttgaagtgc 2051 ttcttcagca gacgaagcat ttaacggctt tgcatatgta tcgttaactg 2101 tctgttgacc tcctcgagca gatcgtccgt cgatctgaaa agcaccccat 2151 tcgacgtaat ctccgtcctt ctcaatatat gatttggcgt cggatgatga 2201 cttgcatgat tcgtattttc catgacaaac atttgaatga ctgggatgtc 2251 gtaagtcgaa gaatcggcaa ttcgtgcatg tgaacttacc ttcgaattgc 2301 agcaaagcat ggagatgagg ctccccattt ccgtgtaatt ctctgcatac 2351 acggatatat tttttgtttg taggtgtgtc taaggctaga agttgagcaa 2401 gtgcctcttc tttggaaata gagcacttgg gataagtaag gaaataattt 2451 ttggactgaa ttttaaaacg tctggccggt ggcatatttg taaataaaga 2501 gatgtctcca aatggcactc ttgtaattgt gggagtgtct ccaattccgc 2551 tccgctcaaa cttgctctat ctattggaga ctggagacaa tttatactag 2601 aaccctcaat agaacttcta atcgtgttcg cacacgtggc ggccatccgt 2651 ataatatt