Sequence of DPV Wheat dwarf virus
Wheat dwarf virus isolate Shahrekord, complete genome.
ACC No: JN791095
Dated: 2012-02-05 | Length: 2750 | CRC: 133143791
ID JN791095; SV 1; circular; genomic DNA; STD; VRL; 2750 BP.
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AC JN791095;
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DT 05-FEB-2012 (Rel. 111, Created)
DT 05-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE Wheat dwarf virus isolate Shahrekord, complete genome.
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KW .
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OS Wheat dwarf virus
OC Viruses; ssDNA viruses; Geminiviridae; Mastrevirus.
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RN [1]
RP 1-2750
RA Lotfipour M.;
RT "Genetic diversity of wheat dwarf virus-strain wheat in Iran";
RL Unpublished.
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RN [2]
RP 1-2750
RA Lotfipour M.;
RT ;
RL Submitted (27-SEP-2011) to the INSDC.
RL Plant Protection, Plant Virology, Badjgah, Shiraz, Iran, Shiraz-Badjgah,
RL Fars 71444, Iran
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FH Key Location/Qualifiers
FH
FT source 1. .2750
FT /organism="Wheat dwarf virus"
FT /host="wheat"
FT /isolate="Shahrekord"
FT /mol_type="genomic DNA"
FT /country="Iran"
FT /collected_by="Maedeh Lotfipour"
FT /collection_date="03-Feb-2010"
FT /db_xref="taxon:10834"
FT gene 171. .443
FT /gene="v1"
FT CDS 171. .443
FT /codon_start=1
FT /gene="v1"
FT /product="movement protein"
FT /protein_id="AEZ00917.1"
FT /translation="MEQAIAPPLPIRADQYQTPSNPGSSDYAWRTFVFVTFGLLIAVGV
FT AWLAYTLFLKDLILVCKAKKQRRTEEIGYGNTPARLNGDQQGLPR"
FT gene 415. .1197
FT /gene="v2"
FT CDS 415. .1197
FT /codon_start=1
FT /gene="v2"
FT /product="coat protein"
FT /protein_id="AEZ00918.1"
FT /translation="MVTNKDSRGKGKRKLEEGESSGRWKGAVYKRRKQTYKVVPVKPPA
FT LCVFRYNWLNSDRTNIVVGNTPRVDLITCFAQGKADNNRHTNQTVLYKFNIQGTCYMSD
FT ASAPFIGPVRLYHWLVYDAEPKQAMPDATDIFTMPWNLLPSTWTVQRAWSHRFVVKRKW
FT TVNLVTDGRKVGSKTVDQRYNWVVGKNIVDASKFFKGLRVTTEWMNTGDGKIGDIKKGA
FT LYLISSTRGGVTGDSASTAFDVVCAYTHACYFKAIGIQ"
FT gene complement(1370. .2511)
FT /gene="C2"
FT CDS complement(join(1370. .1795,1882. .2511))
FT /codon_start=1
FT /gene="C2"
FT /product="replication associated protein"
FT /protein_id="AEZ00919.1"
FT /translation="MASSSTPRFRVYSKYLFLTYPQCTLEPQYALDSLRTLLNKYEPLY
FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNLRMDTSPFSIFHPNIQAAKDCNQVR
FT DYITKEVDSDVNTAEWGTFVAVSTPGRKDRDADMKQIIESSSSREEFLSMVCNRFPFEW
FT SIRLKDFEYTARHLFPDPVATYTPEFPTESLICHETIESWKNEHLYSESPGRHKSIYIC
FT GPTRTGKTSWARSLGTHNYYNSLVDFTTYDVNAKYNIIDDIPFKFTPNWKCFVGAQRDF
FT TVNPKYGKRKVIRGGIPCIILVNPDEDWLKDMTPEQSDYMYSNAVVHYMYEGETFINYS
FT FASGEDVTASQ"
FT gene complement(1717. .2511)
FT /gene="C1"
FT CDS complement(1717. .2511)
FT /codon_start=1
FT /gene="C1"
FT /product="replication associated protein A"
FT /protein_id="AEZ00920.1"
FT /translation="MASSSTPRFRVYSKYLFLTYPQCTLEPQYALDSLRTLLNKYEPLY
FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNLRMDTSPFSIFHPNIQAAKDCNQVR
FT DYITKEVDSDVNTAEWGTFVAVSTPGRKDRDADMKQIIESSSSREEFLSMVCNRFPFEW
FT SIRLKDFEYTARHLFPDPVATYTPEFPTESLICHETIESWKNEHLYSVSLESYILCTST
FT PADQAQSDLEWMDDYSRSHQGGINPSTSAGQPEQERLPGQGL"
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SQ Sequence 2750 BP; 716 A; 595 C; 733 G; 706 T; 0 other;
jn791095 Length: 2750 05-FEB-2012 Type: N Check: 7764 ..
1 accccgcgtg gtggcccccg acgcgcactc ggcttttcgt gagtgcgccg
51 aggcttttgg accacatctt ttctgatcac tttcgtgaaa gatggtgatt
101 tatcacactt ttgacttgga aatctgtgcc atgccttagc ttataaggaa
151 gtgcgtggga gcccatctcg atggagcagg caatagcccc cccgcttcct
201 atacgggcag atcaatacca gaccccctcc aatcccggtt cctccgacta
251 cgcctggcga acatttgtgt tcgttacctt cggtttgcta atagccgtag
301 gcgttgcttg gcttgcttac actctgtttc tgaaagattt aattttagtg
351 tgtaaggcga agaagcaaag gaggaccgag gaaattggtt acgggaatac
401 accggccaga ttaaatggtg accaacaagg actcccgagg taaggggaaa
451 cgtaagctcg aagagggaga atccagcgga aggtggaagg gggctgtgta
501 taagcggcgt aaacagacgt ataaggtagt acctgtgaag cccccagctc
551 tctgcgtatt ccgctacaac tggttgaata gcgacaggac caatattgtt
601 gtgggtaata caccccgggt cgatctgatt acctgttttg ctcagggtaa
651 ggccgataat aatcgccata caaatcagac cgtcctatac aaatttaaca
701 tacagggtac ctgctatatg tccgatgcat cagctccgtt catcggtcca
751 gtccgcctct accactggtt agtctatgat gcagagccga aacaggcaat
801 gccagacgcc actgacatct ttacgatgcc ttggaatctg ctgccgagta
851 cgtggacagt gcaacgtgct tggtcgcatc gattcgtggt gaaaaggaag
901 tggaccgtga accttgttac tgatggacgg aaggtcgggt ctaagaccgt
951 tgaccaacgc tacaactggg tagtcggcaa gaatatcgtg gacgcaagca
1001 agttcttcaa aggtttgcgt gtcacgacgg agtggatgaa cacgggtgac
1051 ggcaagatag gcgacattaa gaagggagca ctgtatctca ttagcagtac
1101 tcgtggtggt gttactggtg acagtgcctc tacggcgttt gatgttgtat
1151 gtgcctatac gcacgcgtgt tatttcaaag ccatcggcat tcagtaataa
1201 aataatattt tatttatctc atgtcattcg attacagagg ctcggctacg
1251 agcaaagaca aaccaaatta taacaaacaa caacccttac acaatgacat
1301 cggaaaacga aatacaacac cctgagatat tacatttata gaaactgtac
1351 gccgtccgcg ctaggacagt cactgcgaag cagtgacatc ttcgccggag
1401 gcgaacgagt agttgatgaa cgtctcgcct tcatacatgt agtgaacaac
1451 agcgttagag tacatgtaat ccgactgttc gggagtcata tctttgagcc
1501 aatcttcgtc tggattaact aaaatgatgc aaggtatgcc accccgtatc
1551 acttttcgct taccatattt tggattgacc gtgaagtcac gctgagcccc
1601 gacgaagcac ttccagttgg gtgtgaactt gaatggaatg tcgtcgatga
1651 tattatactt ggcgttgacg tcatatgttg tgaaatcaac tagactgtta
1701 taataattat gtgtccctag agaccttgcc caggaagtct ttcctgttct
1751 ggttggcccg cagatgtaga tggatttatg cctccctggt gactcctgga
1801 ataatcgtcc atccactcta agtcagattg cgcttgatcc gcaggagtgg
1851 aagtacaaag gatataggat tcgaggctta cggagtagag atgttcattt
1901 ttccagcttt caatggtctc atggcaaatg agtgattcgg ttggaaactc
1951 aggtgtgtaa gtggcaactg ggtcaggaaa tagatggcgt gccgtgtact
2001 cgaagtcttt gagacggata gaccattcaa acggaaaacg attgcaaacc
2051 atgctgagga attcctcgcg agaggaacta gattcaatga tctgtttcat
2101 atccgcatca cggtctttac gacctggagt tgaaactgcc acgaatgttc
2151 cccactcagc tgtgtttaca tcggagtcaa cctccttcgt gatgtaatca
2201 cgaacttggt tgcaatcttt ggcagcttgt atatttggat ggaatatgga
2251 gaatggagat gtatccatac ggaggtttaa ggcattggga ttggtgatgg
2301 aagcacgaag cttgttctgc acgagaacgt gcagatgtgg tgatccatct
2351 tcgtggagct ctctaacagc agcgatgtag aggggctcat atttgttcaa
2401 gagagtgcga agtgaatcca aggcgtactg tggctcaagg gtacattgag
2451 gatatgttag aaagaggtac ttggaataga cacggaacct gggtgtagat
2501 gaagaggcca tggtagtgaa cagaagtccg gcaggtcctt agcgaaaaaa
2551 cggggtgtgc cagaaaactc tatgctctac cctgcgtgga ggtgtgaatt
2601 ctgcacaccg gaaatgcaat gtgtccaatg gtttatatag ggcaggtttt
2651 ggcgggagaa catggcccta gtgttcccac ggtagcgaag cgaatggtgt
2701 gggccctgtt cggtgtgtgg tcggggggcc tccacgcggg ttataatatt