Sequence of DPV Apple chlorotic leaf spot virus

Apple chlorotic leaf spot virus isolate SQ5 coat protein gene, complete cds.

ACC No: JN848989

Dated: 2012-04-05 | Length: 582 | CRC: 521339854

                
ID   JN848989; SV 1; linear; genomic RNA; STD; VRL; 582 BP.
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AC   JN848989;
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DT   05-FEB-2012 (Rel. 111, Created)
DT   05-APR-2012 (Rel. 112, Last updated, Version 2)
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DE   Apple chlorotic leaf spot virus isolate SQ5 coat protein gene, complete
DE   cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Trichovirus.
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RN   [1]
RP   1-582
RX   DOI; 10.1007/s00705-011-1195-5.
RX   PUBMED; 22278708.
RA   Niu F., Pan S., Wu Z., Jiang D., Li S.;
RT   "Complete nucleotide sequences of the genomes of two isolates of apple
RT   chlorotic leaf spot virus from peach (Prunus persica) in China";
RL   Arch. Virol. 157(4):783-786(2012).
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RN   [2]
RP   1-582
RA   Niu F., Pan S., Wu Z., Li S.;
RT   ;
RL   Submitted (12-OCT-2011) to the INSDC.
RL   State Key Laboratory of Biology of Plant Diseases and Insect Pests,
RL   Institute of Plant Protection, Chinese Academy of Agricultural Sciences,
RL   Yuanmingyuan Road West 2, Haidian, Beijing 100193, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .582
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /isolate="SQ5"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collected_by="Shifang Li"
FT                   /collection_date="23-Jun-2011"
FT                   /clone="SQ5-1"
FT                   /db_xref="taxon:12175"
FT   CDS             1. .582
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AEZ03867.1"
FT                   /translation="MAATLNLQLKVDTELRAFLAEANRPLHGKTGGTVELILESIFANI
FT                   AVQGTSEQTEFLDVEVEVKRSGDPTVLQKYNLRTVVELIKLFRTTSSDKNINILTFRQI
FT                   CEAFAPEARDGLVKLKTIGVLTNLYKTMPEVGNKYPELMFDFNKGLNPMLMNKTQRVVV
FT                   TNLNRRLLQTEFAKSENEAKIASVSNDLCI"
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SQ   Sequence 582 BP; 175 A; 127 C; 148 G; 132 T; 0 other;

jn848989 Length: 582  05-APR-2012  Type: N  Check: 2974  ..

       1  atggccgcaa ctttgaacct acagctgaag gtggacacgg aattgagagc
      51  tttcctagcg gaagccaatc gccccctgca tggaaagaca gggggaacag
     101  tggaactgat actggagtcc atcttcgcaa acatcgcggt tcaaggaacg
     151  tcagagcaaa cagaatttct cgacgtggaa gtcgaggtga aaaggagtgg
     201  ggatcccaca gtgctgcaga agtacaatct gaggacggtc gtggagctga
     251  tcaagctttt tcggactacg tcttcggaca agaacatcaa catccttact
     301  tttaggcaga tatgcgaagc cttcgctccg gaagccagag atgggttggt
     351  caaactcaag acaattggtg tcttgaccaa tctatacaag accatgccgg
     401  aggtgggcaa caaatatccc gaactcatgt ttgacttcaa caaagggctt
     451  aacccgatgt taatgaataa gactcaaaga gtggttgtta ccaaccttaa
     501  ccggcgcctt ttacagactg aatttgcaaa aagtgagaac gaggcaaaga
     551  ttgcttcagt ttctaacgat ttgtgcattt aa