Sequence of DPV Eubenangee virus
Eubenangee virus isolate AUS1963/01 segment 3, complete sequence.
ACC No: JQ070378
Dated: 2012-04-15 | Length: 2773 | CRC: -1572310528
ID JQ070378; SV 1; linear; genomic RNA; STD; VRL; 2773 BP.
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AC JQ070378;
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DT 15-APR-2012 (Rel. 112, Created)
DT 15-APR-2012 (Rel. 112, Last updated, Version 1)
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DE Eubenangee virus isolate AUS1963/01 segment 3, complete sequence.
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KW .
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OS Eubenangee virus
OC Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
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RN [1]
RC Publication Status: Online-Only
RP 1-2773
RX PUBMED; 22438872.
RA Belaganahalli M.N., Maan S., Maan N.S., Nomikou K., Pritchard I., Lunt R.,
RA Kirkland P.D., Attoui H., Brownlie J., Mertens P.P.;
RT "Full Genome Sequencing and Genetic Characterization of Eubenangee Viruses
RT Identify Pata Virus as a Distinct Species within the Genus Orbivirus";
RL PLoS One 7(3):E31911-E31911(2012).
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RN [2]
RP 1-2773
RA Belaganahalli M.N., Maan S., Maan N.S., Nomikou K., Mertens P.P.C.;
RT ;
RL Submitted (22-NOV-2011) to the INSDC.
RL Vector-borne Viral Diseases Programme, Institute for Animal Health,
RL Pirbright laboratory, Ash Road Pirbright, Woking, Surrey GU24 0NF, United
RL Kingdom
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CC GenBank Accession Numbers JQ070376-JQ070385 represent the complete
CC genome of Eubenangee virus isolate AUS1963/01.
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FH Key Location/Qualifiers
FH
FT source 1. .2773
FT /organism="Eubenangee virus"
FT /segment="3"
FT /host="mosquitoes (from mix of 11 species)"
FT /isolate="AUS1963/01"
FT /mol_type="genomic RNA"
FT /country="Australia"
FT /collected_by="Doherty and colleagues"
FT /collection_date="1963"
FT /note="infects marsupials and cattle"
FT /db_xref="taxon:40056"
FT CDS 20. .2722
FT /codon_start=1
FT /product="VP3"
FT /note="inner core protein; T2"
FT /protein_id="AFH41511.1"
FT /translation="MAQAVQDSKVPKTAPYLDGDVVANDSGPLLSLFALQEIMQKVREN
FT QAEYLAAARETDLAAPDVQAIITGIKSLADETHYEIRSEPVTSFRHIVMQSHEHFLRIN
FT TYYERMSEIGKSIDEEDPQQTYETILEKVRAIRKEGSFILHGIKTRDLRGVEIADSSIL
FT GVDISNVLPMLTAEYRLMVQNVLDGVIVENGNVADRDVDVFMGAMSDPIYRIYNALQGY
FT IEGIQRYQLHMSMEWLERLGRRKRIIFSQEFLTDFRRADTIWILALQLPVNPTVIWTVP
FT RCDIANLIMNIATCSPTGDYISPNPRITSITLTQRITQTGPFSILAGATPTALQMNDVR
FT KIYLALMFPGQIVLDIKNDPAQRSDPTVRMVAGVVGHLMFTFGRNFTNLTLNMARQLDM
FT ALADFLQYMYNARIPINRGASGEPLDFRIGRAQYDCNQFRGNPQTGQGYNGWGIADVEI
FT REPSPYDHAQRFIRYCDIDSREIIQPTTFGINMQYYAYEEMLRMLVAAGKEQEAAYFRA
FT MLPFHMVRFARINQIINEDLISAFTLPDDAFNTLLPNMIQGIQGRHTPIVLEVSWMSIW
FT FSFNRAFDPTNRSELLTLTPLIESIYASELSVMKTDMRAMATLRTRFPDTLIGARPSHF
FT WKAVLNVSPEPVKNLMNMAHAFDYVNLKDIMEWVNEPSMQPSMKLTLEREAWVVANDFE
FT DLMLVDQVFMQRTILPEPRLDDIRLFRRDGFFFTNMLEGPPRINDVIQYTYEVARLQAN
FT MGQFRAALRRILDDDGWIRFGGALRSVKIKFFDARPPESILQEVPFSYETSEKGGLFYA
FT TIKYATEATVYYLIYNVEYSNTPDSLILINPTYTMTKVYMTKRIVERVHAGQLLSVLNK
FT RFVAYKGKMRLMDITTALKAGTRLAVPTQ"
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SQ Sequence 2773 BP; 820 A; 519 C; 695 G; 739 T; 0 other;
jq070378 Length: 2773 15-APR-2012 Type: N Check: 5181 ..
1 gtataattcc gtggcgagta tggctcaagc agtgcaagat agtaaagtgc
51 caaagacagc gccatatttg gatggagatg ttgtcgcgaa tgactcagga
101 ccgttgctgt cgctgttcgc attacaggag attatgcaaa aggtgcgtga
151 aaatcaagca gagtatttgg ctgcagcgag agagacggat ctggcggcac
201 cggatgtaca agcaatcata accggaatca agtcgttagc tgatgagact
251 cactatgaga tcaggtcaga accggtaaca tcgtttagac atatagtgat
301 gcaatcgcat gagcattttt tgcgaatcaa cacgtattat gaacggatgt
351 cggagatcgg gaaatcaatt gatgaagagg atccgcaaca aacgtacgaa
401 acgattttgg agaaggtacg agcgatcagg aaagagggat cattcatctt
451 acacggcatt aaaacacgtg atttgcgagg tgtggaaata gccgattcca
501 gcattttggg ggttgatatc tcaaatgtac taccgatgct gactgctgaa
551 tatcgcttaa tggtacagaa tgtgttggat ggtgtaatcg ttgaaaacgg
601 aaatgttgcc gatcgtgacg ttgacgtatt tatgggggca atgtcagatc
651 ccatctatag gatttacaat gctctgcagg gctatattga gggcatacag
701 agataccaat tacatatgtc aatggagtgg ttagaacgat tgggtagacg
751 taaaaggata atcttttctc aagagttttt gactgatttt agacgtgctg
801 atacaatttg gattttggct ttacaattac cagtgaaccc aaccgtcatt
851 tggacggttc caagatgtga tattgctaat cttataatga acatagctac
901 gtgtagccca acaggtgatt atatttctcc gaatccaaga atcacaagca
951 taacgttgac acaacgaata acacagacag gtccattctc aatactggct
1001 ggagcaacac caacagcgtt acaaatgaat gatgtacgaa agatatatct
1051 ggctctgatg ttccctggtc aaattgtatt ggatataaaa aacgacccag
1101 cacaaagatc ggacccgaca gttcgaatgg tggcaggcgt tgttgggcat
1151 ttgatgttta cgtttggacg aaatttcacc aatttgactc tgaatatggc
1201 gaggcagttg gatatggctt tggctgattt tttacaatat atgtacaacg
1251 ccagaattcc aataaatcga ggtgcttcgg gtgaaccact tgattttaga
1301 ataggtcgag cgcaatatga ttgcaaccaa tttcgtggta acccacaaac
1351 tgggcaggga tataacgggt ggggaatagc tgacgttgaa attagagaac
1401 cgagcccgta cgatcatgca cagcggttta tacgatattg tgatatagat
1451 tcaagagaga tcatacaacc tacgaccttc gggattaata tgcagtatta
1501 cgcctatgag gaaatgctga ggatgctggt ggctgcggga aaagaacagg
1551 aggcggctta ctttcgcgca atgttaccgt ttcacatggt gaggtttgcg
1601 agaataaatc aaattataaa tgaagatcta atttcggcgt tcactttgcc
1651 agatgatgct ttcaatactt tattacccaa tatgattcaa ggtatacagg
1701 gcagacatac gccaatcgtt ctggaagtaa gctggatgtc gatctggttt
1751 tcatttaatc gcgcattcga cccaacgaat agatcggaat tgttgacgct
1801 aacccctttg atagagtcaa tatacgcgtc tgagttatca gtgatgaaga
1851 cggatatgag agcgatggcg acgttacgaa ctcgattccc agatacacta
1901 attggtgcac gcccctctca tttttggaaa gcagtactga atgtatctcc
1951 cgaaccggtg aagaacttga tgaatatggc gcatgcgttt gattatgtca
2001 acttgaaaga tattatggaa tgggtgaatg aaccatcgat gcaaccttcg
2051 atgaagttga cattagaacg tgaggcgtgg gttgtggcga acgatttcga
2101 ggatttgatg ttggtagatc aagtgttcat gcaaaggacc atcctacctg
2151 aacctaggtt ggatgacatc cgattgttta ggcgggatgg tttctttttc
2201 acgaacatgt tggaagggcc tcctcgtatc aacgatgtga ttcagtatac
2251 atacgaggtt gctaggctgc aagcaaatat ggggcagttt cgtgcagcgt
2301 tgcgtagaat tttggatgat gacggttgga ttaggtttgg aggggcatta
2351 cgctccgtca aaatcaagtt ctttgatgca agaccaccag agtcaatatt
2401 acaagaagtt ccattttcgt atgaaacaag tgaaaaaggt ggattgttct
2451 acgcaaccat caaatacgct acggaagcga ccgtatacta tttgatttat
2501 aacgtcgaat actctaatac gccggactct ttgatcctaa ttaatccaac
2551 atacacgatg acgaaggtat atatgacgaa gcgaatagtg gagagagtgc
2601 atgcagggca gttgctttcg gttcttaaca aacgattcgt tgcatacaaa
2651 gggaagatgc ggttgatgga tattaccacc gcgctgaaag ccggcactcg
2701 ccttgcggtt ccaactcaat aacgtgtacg cgaccgcatg tgatgggcga
2751 caaccgcaac gggacacact tac