Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 6D clone 12 coat protein (p25) gene, complete cds.
ACC No: JQ339729
Dated: 2012-06-01 | Length: 672 | CRC: 262323132
ID JQ339729; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC JQ339729; XX DT 01-JUN-2012 (Rel. 113, Created) DT 01-JUN-2012 (Rel. 113, Last updated, Version 1) XX DE Citrus tristeza virus isolate 6D clone 12 coat protein (p25) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Licciardello G., Raspagliesi D., Catara A.; RT "Biological and molecular characterization of Citrus tristeza virus (CTV) RT isolates"; RL Unpublished. XX RN [2] RP 1-672 RA Licciardello G., Raspagliesi D., Catara A.; RT ; RL Submitted (29-DEC-2011) to the INSDC. RL Parco Scientifico e Tecnologico della Sicilia s.c.p.a., ZI Blocco Palma I, RL Str.le V. Lancia 57, Catania, Catania 95121, Italy XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus macrophylla" FT /isolate="6D" FT /mol_type="genomic RNA" FT /country="Italy:Sicily" FT /clone="12" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="p25" FT CDS 1. .672 FT /codon_start=1 FT /gene="p25" FT /product="coat protein" FT /protein_id="AEX56598.1" FT /translation="MDDETKKLKNKNKEAKEGDDVVAAESSFGSLNFHIDPTLIAMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEIVVTNVRQLGRFNT FT R" XX SQ Sequence 672 BP; 192 A; 128 C; 174 G; 178 T; 0 other; jq339729 Length: 672 01-JUN-2012 Type: N Check: 1052 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aagcgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaacttcc 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaagtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagacaaaga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga cgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaaatcgta gttaccaatg tcaggcagct 651 tgggagattc aacacacgtt ga