Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate HU-PSTS clone 53.9 coat protein (p25) gene, complete cds.
ACC No: JQ339734
Dated: 2012-06-01 | Length: 672 | CRC: -1212631477
ID JQ339734; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC JQ339734; XX DT 01-JUN-2012 (Rel. 113, Created) DT 01-JUN-2012 (Rel. 113, Last updated, Version 1) XX DE Citrus tristeza virus isolate HU-PSTS clone 53.9 coat protein (p25) gene, DE complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Licciardello G., Raspagliesi D., Catara A.; RT "Biological and molecular characterization of Citrus tristeza virus (CTV) RT isolates"; RL Unpublished. XX RN [2] RP 1-672 RA Licciardello G., Raspagliesi D., Catara A.; RT ; RL Submitted (29-DEC-2011) to the INSDC. RL Parco Scientifico e Tecnologico della Sicilia s.c.p.a., ZI Blocco Palma I, RL Str.le V. Lancia 57, Catania, Catania 95121, Italy XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="sweet orange" FT /isolate="HU-PSTS" FT /mol_type="genomic RNA" FT /country="China" FT /clone="53.9" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="p25" FT CDS 1. .672 FT /codon_start=1 FT /gene="p25" FT /product="coat protein" FT /protein_id="AEX56603.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNFHIDPTLIAMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT FT YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYLQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 124 C; 170 G; 181 T; 0 other; jq339734 Length: 672 01-JUN-2012 Type: N Check: 3812 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 gggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaacttcc 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaagtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataaaga ctttcacata gctatgatgt 251 tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc 301 acgggtgtga cgtacactcg ggaaggtgtt gaagtggagt tgtctgacaa 351 actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agaactaacg atgcccttta tttggctttt 451 tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gcagtgtact tacaagctaa agagcaatta 601 ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga