Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate 02_CT_BEL_SCI_SwO_02 p20 protein gene, complete cds.

ACC No: JQ422288

Dated: 2012-08-07 | Length: 549 | CRC: 1488046502

                
ID   JQ422288; SV 1; linear; genomic RNA; STD; VRL; 549 BP.
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AC   JQ422288;
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DT   07-AUG-2012 (Rel. 113, Created)
DT   07-AUG-2012 (Rel. 113, Last updated, Version 1)
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DE   Citrus tristeza virus isolate 02_CT_BEL_SCI_SwO_02 p20 protein gene,
DE   complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-549
RA   Davino S., Panno S., Davino M., Rubio L.;
RT   "Citrus tristeza virus in Italy: fron an outbreak to a pandemy";
RL   Unpublished.
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RN   [2]
RP   1-549
RA   Davino S., Panno S., Davino M., Rubio L.;
RT   ;
RL   Submitted (18-JAN-2012) to the INSDC.
RL   DEMETRA, University of Palermo, Viale delle Scienze ed. 4, Palermo, Sicily
RL   90128, Italy
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FH   Key             Location/Qualifiers
FH
FT   source          1. .549
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sp."
FT                   /isolate="02_CT_BEL_SCI_SwO_02"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .549
FT                   /codon_start=1
FT                   /product="p20 protein"
FT                   /note="forms inclusion bodies and play a role of
FT                   suppressors of RNA silencing"
FT                   /protein_id="AFP33043.1"
FT                   /translation="MRAYFSVNDYIRLLAKVGAVVERLCDPSVTLTEVMDEINDFNSFL
FT                   ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRILLDIIRRRFTRDKLLCTSATD
FT                   VMGFFVMRYMSSSHTSFESVMRTELKLVVKAVLSDLSRAHKQDFSERAFAAYGILLQKG
FT                   TVATVCGQFDINLVSPSCV"
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SQ   Sequence 549 BP; 136 A; 112 C; 141 G; 160 T; 0 other;

jq422288 Length: 549  07-AUG-2012  Type: N  Check: 3021  ..

       1  atgcgagctt actttagtgt taacgattac ataaggcttt tggctaaggt
      51  cggcgcagtt gtggaacgtt tgtgcgatcc cagcgtaact ctcacggaag
     101  tgatggacga aattaatgat tttaactcgt ttctcgcttt ggtacactct
     151  atgaagtcgg acatgaacgg cgatcatcag gatggtcacc atgagatggg
     201  tgaacacaag tctcgattgt tgtgcaatat agaggcgaaa ctgcgaatac
     251  ttctcgatat cataagacgt cggtttactc gcgacaagct gctctgtact
     301  agcgcaacag atgtcatggg cttcttcgtt atgaggtaca tgagttctag
     351  tcacaccagt ttcgagtccg taatgcgaac ggagctgaaa ttagtggtta
     401  aagcggtact gtcggattta tcccgcgcgc ataaacaaga ttttagcgag
     451  cgagcctttg cggcttacgg tatccttttg caaaagggta ctgtagcgac
     501  cgtttgcggt cagtttgaca ttaatttagt ctctccatct tgcgtgtag