Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate 03_CT_BEL_MEL_SwO_01 p20 protein gene, complete cds.

ACC No: JQ422292

Dated: 2012-08-07 | Length: 549 | CRC: 59264669

                
ID   JQ422292; SV 1; linear; genomic RNA; STD; VRL; 549 BP.
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AC   JQ422292;
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DT   07-AUG-2012 (Rel. 113, Created)
DT   07-AUG-2012 (Rel. 113, Last updated, Version 1)
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DE   Citrus tristeza virus isolate 03_CT_BEL_MEL_SwO_01 p20 protein gene,
DE   complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-549
RA   Davino S., Panno S., Davino M., Rubio L.;
RT   "Citrus tristeza virus in Italy: fron an outbreak to a pandemy";
RL   Unpublished.
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RN   [2]
RP   1-549
RA   Davino S., Panno S., Davino M., Rubio L.;
RT   ;
RL   Submitted (18-JAN-2012) to the INSDC.
RL   DEMETRA, University of Palermo, Viale delle Scienze ed. 4, Palermo, Sicily
RL   90128, Italy
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FH   Key             Location/Qualifiers
FH
FT   source          1. .549
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sp."
FT                   /isolate="03_CT_BEL_MEL_SwO_01"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2003"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .549
FT                   /codon_start=1
FT                   /product="p20 protein"
FT                   /note="forms inclusion bodies and play a role of
FT                   suppressors of RNA silencing"
FT                   /protein_id="AFP33047.1"
FT                   /translation="MRAYFSVNDYISLLAKVGAVVERLCDPSVTLTEVMDEINDFNSFL
FT                   ALVHSMKTDMNGDHQDGHHEMGEHKSRLLCNIEAKLRVLLDIIRRRFTREKLLCTSATD
FT                   VMGFFVVRYMSSSHTSFESVMHTELKLVVKAVLSDLTRTHKLDFSERAFAAYGILLQKG
FT                   AVATVCSQFDINLVSPSCV"
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SQ   Sequence 549 BP; 135 A; 116 C; 142 G; 156 T; 0 other;

jq422292 Length: 549  07-AUG-2012  Type: N  Check: 854  ..

       1  atgcgagctt actttagtgt taacgattac ataagccttt tggctaaggt
      51  cggcgcagtt gtggaacgtt tatgcgatcc cagcgtaact ctcacggaag
     101  tgatggacga aattaatgac tttaactcgt tcctcgcttt ggtgcactct
     151  atgaagacgg acatgaacgg agatcatcag gatggtcacc atgagatggg
     201  tgaacacaag tctcggttgt tgtgcaacat agaggcgaaa ctgcgagtac
     251  ttctcgacat cataagacgt cggttcactc gcgaaaaact gctctgtacc
     301  agtgctacgg atgtcatggg cttcttcgtc gtgaggtaca tgagttctag
     351  tcacaccagt ttcgagtccg taatgcacac ggaattgaag ttagtggtta
     401  aggcggtgct gtcagatttg acccgcacgc ataaactaga ttttagcgag
     451  cgagcctttg cggcttacgg tatcctttta caaaagggtg ccgtggcaac
     501  cgtttgtagt cagtttgaca ttaatttagt ttctccatct tgcgtgtag