Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 05_CT_CAL___01 p20 protein gene, complete cds.
ACC No: JQ422303
Dated: 2012-08-07 | Length: 549 | CRC: 486243224
ID JQ422303; SV 1; linear; genomic RNA; STD; VRL; 549 BP. XX AC JQ422303; XX DT 07-AUG-2012 (Rel. 113, Created) DT 07-AUG-2012 (Rel. 113, Last updated, Version 1) XX DE Citrus tristeza virus isolate 05_CT_CAL___01 p20 protein gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-549 RA Davino S., Panno S., Davino M., Rubio L.; RT "Citrus tristeza virus in Italy: fron an outbreak to a pandemy"; RL Unpublished. XX RN [2] RP 1-549 RA Davino S., Panno S., Davino M., Rubio L.; RT ; RL Submitted (18-JAN-2012) to the INSDC. RL DEMETRA, University of Palermo, Viale delle Scienze ed. 4, Palermo, Sicily RL 90128, Italy XX FH Key Location/Qualifiers FH FT source 1. .549 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="05_CT_CAL___01" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="2005" FT /db_xref="taxon:12162" FT CDS 1. .549 FT /codon_start=1 FT /product="p20 protein" FT /note="forms inclusion bodies and play a role of FT suppressors of RNA silencing" FT /protein_id="AFP33058.1" FT /translation="MRVHFSVNDYISLLAKVGAVVERLCDPSVTLTEVMDEINDFNSFL FT ALVHSMKSDMNGDHQDGHHGMGEHKSRLLCNIEAKLRILLDIIRRRFTRDKLLCTSATD FT VMGFFVMRYMSSSHTSFESVMRTELKLLVKAVLSDLSRAHKLDFSERAFAAYGILLQKG FT TVATVCGQFDINLVSPSCV" XX SQ Sequence 549 BP; 134 A; 114 C; 140 G; 161 T; 0 other; jq422303 Length: 549 07-AUG-2012 Type: N Check: 3495 .. 1 atgcgagttc actttagtgt taacgattac ataagccttt tggctaaggt 51 cggcgcagtt gtggaacgtt tgtgcgatcc cagcgtaact ctcacggaag 101 tgatggacga aattaatgat tttaactcgt ttctcgcttt ggtacactct 151 atgaagtcgg acatgaacgg cgatcatcag gatggtcacc atgggatggg 201 tgaacacaag tctcgattgt tgtgcaatat agaggcgaaa ctgcgaatac 251 ttctcgatat cataagacgt cggtttactc gcgacaagct gctctgtacc 301 agcgcaacag atgtcatggg cttcttcgtt atgaggtaca tgagttctag 351 tcacactagt ttcgagtccg taatgcgaac ggagctgaaa ttactggtta 401 aagcggtact gtcggattta tcccgcgcgc ataaactaga ttttagcgag 451 cgagcctttg cggcttacgg tatccttttg caaaagggta ctgtagcgac 501 cgtttgcggt cagtttgaca ttaatttagt ctctccatct tgcgtgtag