Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 07_CT_RAM_NuT_SwO_01 p20 protein gene, complete cds.
ACC No: JQ422336
Dated: 2012-08-07 | Length: 549 | CRC: 732997440
ID JQ422336; SV 1; linear; genomic RNA; STD; VRL; 549 BP. XX AC JQ422336; XX DT 07-AUG-2012 (Rel. 113, Created) DT 07-AUG-2012 (Rel. 113, Last updated, Version 1) XX DE Citrus tristeza virus isolate 07_CT_RAM_NuT_SwO_01 p20 protein gene, DE complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-549 RA Davino S., Panno S., Davino M., Rubio L.; RT "Citrus tristeza virus in Italy: fron an outbreak to a pandemy"; RL Unpublished. XX RN [2] RP 1-549 RA Davino S., Panno S., Davino M., Rubio L.; RT ; RL Submitted (18-JAN-2012) to the INSDC. RL DEMETRA, University of Palermo, Viale delle Scienze ed. 4, Palermo, Sicily RL 90128, Italy XX FH Key Location/Qualifiers FH FT source 1. .549 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="07_CT_RAM_NuT_SwO_01" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="2007" FT /db_xref="taxon:12162" FT CDS 1. .549 FT /codon_start=1 FT /product="p20 protein" FT /note="forms inclusion bodies and play a role of FT suppressors of RNA silencing" FT /protein_id="AFP33091.1" FT /translation="MRAYFSVNDYISLSAKVGAVVERLCDPSVTLTEVMDEINDFNSFL FT ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRILLDIIRRRFTRDKLLCTSVTD FT TMGFFEMRYMSSSHTSFESVMRTELKLVVKAVLSDLSRAHKLDFSERAFAAYGILLQKG FT TVATVCGQFDINLVSPSCV" XX SQ Sequence 549 BP; 144 A; 114 C; 134 G; 157 T; 0 other; jq422336 Length: 549 07-AUG-2012 Type: N Check: 9663 .. 1 atgcgagctt actttagtgt taacgattac ataagccttt cggctaaggt 51 cggcgcagtt gtggaacgtt tatgcgatcc aagcgtaact ctcacggaag 101 tgatggacga aattaatgat tttaactcgt ttctcgcttt ggtacactct 151 atgaagtcgg acatgaacgg cgatcatcag gatggtcacc atgagatggg 201 tgaacacaag tctcgattgt tgtgcaatat agaggcgaaa ctgcgaatac 251 ttctcgacat cataagacgt cggtttactc gcgacaagct actctgtacc 301 agcgtaacag ataccatggg cttcttcgaa atgaggtaca tgagttctag 351 tcacaccagt ttcgagtccg taatgcgaac agagctgaaa ttagtggtta 401 aagcggtact gtcggatttg tcccgcgcgc ataaactaga ttttagcgaa 451 cgagcctttg cagcttacgg tatcctttta caaaagggta ctgtagcgac 501 cgtttgcggt cagtttgaca ttaatttagt ttctccatct tgcgtgtag