Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 02_SR_CAS_NOV_Man_01 p20 protein gene, complete cds.
ACC No: JQ422353
Dated: 2012-08-07 | Length: 549 | CRC: -1105243144
ID JQ422353; SV 1; linear; genomic RNA; STD; VRL; 549 BP. XX AC JQ422353; XX DT 07-AUG-2012 (Rel. 113, Created) DT 07-AUG-2012 (Rel. 113, Last updated, Version 1) XX DE Citrus tristeza virus isolate 02_SR_CAS_NOV_Man_01 p20 protein gene, DE complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-549 RA Davino S., Panno S., Davino M., Rubio L.; RT "Citrus tristeza virus in Italy: fron an outbreak to a pandemy"; RL Unpublished. XX RN [2] RP 1-549 RA Davino S., Panno S., Davino M., Rubio L.; RT ; RL Submitted (18-JAN-2012) to the INSDC. RL DEMETRA, University of Palermo, Viale delle Scienze ed. 4, Palermo, Sicily RL 90128, Italy XX FH Key Location/Qualifiers FH FT source 1. .549 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="02_SR_CAS_NOV_Man_01" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="2002" FT /db_xref="taxon:12162" FT CDS 1. .549 FT /codon_start=1 FT /product="p20 protein" FT /note="forms inclusion bodies and play a role of FT suppressors of RNA silencing" FT /protein_id="AFP33108.1" FT /translation="MRAYFSVNDYISLLAKVGSVVERLCDPSVTLTEVMDEINDFNSFL FT ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRVLLDIIRRRFTREKLLCTSATD FT VVGFFVVRYMSSSHTSFETVMRTELKLVVKAVLSELSRTHKLDFSERAFTAYGILLQKG FT TVATVCGQFDINLVSPSCV" XX SQ Sequence 549 BP; 133 A; 111 C; 141 G; 164 T; 0 other; jq422353 Length: 549 07-AUG-2012 Type: N Check: 5825 .. 1 atgcgagctt actttagtgt taacgattac ataagccttt tggctaaggt 51 tggttcagtt gtggaacgtt tgtgcgatcc cagcgtaact ctcaccgaag 101 tgatggacga aattaatgat tttaactcgt ttctcgcttt ggtacactct 151 atgaagtcgg acatgaacgg cgatcatcag gatggtcacc atgagatggg 201 tgaacataaa tctcggttgt tgtgcaatat agaggcgaaa ctgcgagtgc 251 ttctcgacat cataagacgt cggtttactc gcgaaaaact gctctgtacc 301 agtgctacag atgttgtggg cttcttcgtc gtgaggtaca tgagttctag 351 tcacactagt ttcgaaaccg taatgcgaac ggaactgaag ttggtggtta 401 aagctgtgct gtcggaattg tcccgcacgc ataaactaga ttttagcgag 451 cgagccttta cggcttacgg tatccttttg cagaagggca ccgtggcaac 501 cgtttgcggt cagtttgaca ttaatttagt ttctccatct tgcgtgtag