Sequence of DPV Grapevine leafroll-associated virus 4
Grapevine leafroll-associated virus 5 isolate CG6 variant 2 capsid protein (CP) gene, complete cds.
ACC No: JQ619086
Dated: 2012-09-03 | Length: 810 | CRC: 1033762603
ID JQ619086; SV 1; linear; genomic RNA; STD; VRL; 810 BP. XX AC JQ619086; XX DT 03-JUL-2012 (Rel. 113, Created) DT 03-SEP-2012 (Rel. 114, Last updated, Version 2) XX DE Grapevine leafroll-associated virus 5 isolate CG6 variant 2 capsid protein DE (CP) gene, complete cds. XX KW . XX OS Grapevine leafroll-associated virus 5 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Ampelovirus. XX RN [1] RP 1-810 RX PUBMED; 22692680. RA Esteves F., Teixeira Santos M., Eiras-Dias J.E., Fonseca F.; RT "Occurrence of grapevine leafroll-associated virus 5 in Portugal: genetic RT variability and population structure in field-grown grapevines"; RL Arch. Virol. 157(9):1747-1765(2012). XX RN [2] RP 1-810 RA Esteves F., Fonseca F.; RT ; RL Submitted (03-FEB-2012) to the INSDC. RL Universidade do Algarve, Campus de Gambelas 8005-139 Faro, Portugal XX FH Key Location/Qualifiers FH FT source 1. .810 FT /organism="Grapevine leafroll-associated virus 5" FT /host="Vitis vinifera" FT /isolate="CG6 variant 2" FT /mol_type="genomic RNA" FT /country="Portugal" FT /db_xref="taxon:71032" FT gene 1. .810 FT /gene="CP" FT CDS 1. .810 FT /codon_start=1 FT /gene="CP" FT /product="capsid protein" FT /protein_id="AFD98023.1" FT /translation="MSGTVQDVAPTVPTTPPTSETEAERKAREAKEKADLEEIQSLPVI FT QGRTTVDTFEALINSSNGVLDLSRLEFPRLFNVTIPGVVSGKHKVIGARALWNLGKSKG FT ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS FT IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR FT LFGYDASLAAELGKMVAINKPSNSNKATHNLYEDTRVAPDIFLGNRR" XX SQ Sequence 810 BP; 237 A; 185 C; 205 G; 183 T; 0 other; jq619086 Length: 810 03-SEP-2012 Type: N Check: 5121 .. 1 atgtctggaa cagtgcagga cgttgctccg acggtaccga caaccccacc 51 cactagtgag acggaggctg agcgaaaagc tagagaagct aaggagaagg 101 ccgacttaga ggagatacaa tcccttcccg tgatacaagg taggacaact 151 gtggacactt tcgaagcact aatcaatagc tcgaatggtg tactagactt 201 gtctaggctg gagttcccta ggctgtttaa cgttacaata cctggcgttg 251 tgtcgggtaa acataaagtg atcggggcga gagctctctg gaacttgggg 301 aaatcgaaag ggatatctga gagtgacaag catcaagtac agttcttgat 351 gcaatccttt caggatttca taacgcactc aacgtctccc aaggtgtcca 401 gctcttccaa tcggacaata actggtaagt atgatggtaa ggaagtgaca 451 gttgcccacg acgagataaa gacagctcta gacaattcta tagggtcttt 501 cggttacgaa aacactccta gacaatttgg aagagcattc acggcagcga 551 tagtgcaagg gatatcctca ggcaagctag aggtgaacac aaagatatgc 601 gcctctcacg gtgtaccgcc taactactat ccttactcgc cggactgtct 651 gcatgttgat gcacgactat tcggttatga cgcttcactg gcagctgagt 701 taggtaagat ggttgctatc aacaaacctt ccaacagcaa caaagctaca 751 cataatctgt acgaagacac cagggtggct ccggacatct tcctgggtaa 801 caggagatga