Sequence of DPV Grapevine leafroll-associated virus 4
Grapevine leafroll-associated virus 5 isolate DM variant 1 capsid protein (CP) gene, complete cds.
ACC No: JQ619127
Dated: 2012-09-03 | Length: 810 | CRC: -1588534277
ID JQ619127; SV 1; linear; genomic RNA; STD; VRL; 810 BP. XX AC JQ619127; XX DT 03-JUL-2012 (Rel. 113, Created) DT 03-SEP-2012 (Rel. 114, Last updated, Version 2) XX DE Grapevine leafroll-associated virus 5 isolate DM variant 1 capsid protein DE (CP) gene, complete cds. XX KW . XX OS Grapevine leafroll-associated virus 5 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Ampelovirus. XX RN [1] RP 1-810 RX PUBMED; 22692680. RA Esteves F., Teixeira Santos M., Eiras-Dias J.E., Fonseca F.; RT "Occurrence of grapevine leafroll-associated virus 5 in Portugal: genetic RT variability and population structure in field-grown grapevines"; RL Arch. Virol. 157(9):1747-1765(2012). XX RN [2] RP 1-810 RA Esteves F., Fonseca F.; RT ; RL Submitted (03-FEB-2012) to the INSDC. RL Universidade do Algarve, Campus de Gambelas 8005-139 Faro, Portugal XX FH Key Location/Qualifiers FH FT source 1. .810 FT /organism="Grapevine leafroll-associated virus 5" FT /host="Vitis vinifera cv D. Maria" FT /isolate="DM variant 1" FT /mol_type="genomic RNA" FT /country="Portugal" FT /db_xref="taxon:71032" FT gene 1. .810 FT /gene="CP" FT CDS 1. .810 FT /codon_start=1 FT /gene="CP" FT /product="capsid protein" FT /protein_id="AFD98064.1" FT /translation="MSGSVQNVVPATPSTPPISETEAERKAREDKEKADLEEIQSLPVI FT QGRTTVDTFEALINSSNGVLDLSRLELPRLFNVTIPGVVSGKHKVIGARALWNLGKSKG FT ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS FT IGSFGCENTPRQFGRAFTAAIVQGISSGKLEVNTRICASHGVPPNYYPYSPDCLHVDAR FT LFGYDASLAAELGKMVAINKPSNSNRATHNLYEDTRVAPDIFLGNRR" XX SQ Sequence 810 BP; 230 A; 175 C; 215 G; 190 T; 0 other; jq619127 Length: 810 03-SEP-2012 Type: N Check: 910 .. 1 atgtctgggt cagtgcagaa tgttgttccg gcaacgccgt caaccccacc 51 aattagtgag acagaggctg agcggaaggc tagagaagat aaggagaagg 101 ccgacttgga ggagatacaa tctcttcccg tgatacaagg taggacaacc 151 gtggacactt ttgaagcgct aatcaatagc tcgaacggtg tactagactt 201 gtctaggctg gagttaccta ggttgtttaa cgtcacgata cctggcgttg 251 tgtcgggtaa acacaaagtg attggggcga gagctctctg gaacttgggg 301 aaatcgaaag ggatatctga gagtgataag catcaagtac agttcttgat 351 gcaatccttt caggatttca taacgcactc aacgtctcct aaggtatcca 401 gttcttccaa tcggacaata actggtaagt acgatggtaa ggaggtgaca 451 gttgcccatg atgagataaa gacagctctg gacaattcta tagggtcttt 501 cggttgcgaa aacactccta gacaatttgg aagagcattc acggcagcga 551 tagtgcaagg gatatcctca ggcaaactgg aggtgaacac gaggatatgc 601 gcttctcacg gtgtaccgcc taactactat ccctactcgc cggattgtct 651 gcatgttgat gcaagactgt tcggttatga cgcttcactg gcagctgagt 701 taggcaagat ggttgctatc aacaaacctt ccaacagcaa cagagctaca 751 cacaatctgt acgaagacac cagggtggct ccggacatat tcctgggtaa 801 caggaggtaa