Sequence of DPV Beet curly top Iran virus
Beet curly top Iran virus isolate IR:Kam:B24K:Sug:08, complete genome.
ACC No: JQ707943
Dated: 2013-01-29 | Length: 2845 | CRC: -221703587
ID JQ707943; SV 1; circular; genomic DNA; STD; VRL; 2845 BP. XX AC JQ707943; XX DT 28-MAY-2012 (Rel. 112, Created) DT 29-JAN-2013 (Rel. 115, Last updated, Version 3) XX DE Beet curly top Iran virus isolate IR:Kam:B24K:Sug:08, complete genome. XX KW . XX OS Beet curly top Iran virus OC Viruses; ssDNA viruses; Geminiviridae; Curtovirus. XX RN [1] RP 1-2845 RX PUBMED; 23081676. RA Heydarnejad J., Keyvani N., Razavinejad S., Massumi H., Varsani A.; RT "Fulfilling Koch's postulates for beet curly top Iran virus and proposal RT for consideration of new genus in the family Geminiviridae"; RL Arch. Virol. 158(2):435-443(2013). XX RN [2] RP 1-2845 RA Heydarnejad J., Varsani A.; RT "Fulfilling the Koch's postulate for Beet curly top Iran virus, a unique RT geminivirus with a mastrevirus-like replication associated protein and RT curtovirus-like capsid protein"; RL Unpublished. XX RN [3] RP 1-2845 RA Heydarnejad J., Varsani A.; RT ; RL Submitted (25-FEB-2012) to the INSDC. RL Plant Protection, Shahid Bahonar University of Kerman, 22 Bahman Ave, RL Kerman 7616914111, Iran XX FH Key Location/Qualifiers FH FT source 1. .2845 FT /organism="Beet curly top Iran virus" FT /host="Beta vulgaris" FT /isolate="IR:Kam:B24K:Sug:08" FT /mol_type="genomic DNA" FT /country="Iran:Kamal-Abad, Kerman" FT /collected_by="J. Heydarnejad" FT /collection_date="2008" FT /clone="B24K" FT /db_xref="taxon:391228" FT gene 166. .435 FT /gene="V3" FT CDS 166. .435 FT /codon_start=1 FT /gene="V3" FT /product="ss-ds DNA regulator" FT /db_xref="InterPro:IPR009997" FT /db_xref="UniProtKB/TrEMBL:I3QQ92" FT /protein_id="AFK14052.1" FT /translation="MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRF FT DELFLALQQVVFARNRASSSRAVDSRGRRGLSSIPEGSEEIAEA" FT gene 242. .607 FT /gene="V2" FT CDS 242. .607 FT /codon_start=1 FT /gene="V2" FT /product="movement protein" FT /db_xref="InterPro:IPR009931" FT /db_xref="UniProtKB/TrEMBL:I3QQ93" FT /protein_id="AFK14053.1" FT /translation="MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIEPQVREPLTL FT EEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDD FT RWEDSFEEIPMEETGSK" FT gene 486. .1238 FT /gene="V1" FT CDS 486. .1238 FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /db_xref="GOA:I3QQ89" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:I3QQ89" FT /protein_id="AFK14054.1" FT /translation="MAVQSQKRKYTPPASWTRKRKTTGGRTVSKKYQWKRPVRSNRAVK FT LKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGA FT FWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKK FT KWQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENA FT ILYVVVNDNTDNTNMYATLFGNCRAYFY" FT gene complement(1484. .1789) FT /gene="C2" FT CDS complement(1484. .1789) FT /codon_start=1 FT /gene="C2" FT /product="hypothetical RepB" FT /db_xref="UniProtKB/TrEMBL:I3QQB5" FT /protein_id="AFK14055.1" FT /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS FT VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS" FT gene complement(1804. .2712) FT /gene="C1" FT CDS complement(1804. .2712) FT /codon_start=1 FT /gene="C1" FT /product="hypothetical RepA" FT /db_xref="GOA:I3QQ96" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I3QQ96" FT /protein_id="AFK14056.1" FT /translation="MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK FT TLLESYVILFLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTI FT HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNNIGNSNVEWRRILDSSNTKEE FT FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF FT VSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSRDLTCSEDTNVLNLSRSQTTDQS FT DQEVSTYADHPEQERPSGQDL" XX SQ Sequence 2845 BP; 804 A; 490 C; 661 G; 890 T; 0 other; jq707943 Length: 2845 29-JAN-2013 Type: N Check: 8791 .. 1 ccgcgtttac ctttccacgt ggcgtatgct gagtgggcgg acggttgagt 51 ggggaacacg ctttacttta aattaaagta aagtagcact aagtgggacc 101 cacttttttt atttctttaa agactttctt tttaagtctt ctagatgcgt 151 atattatacg tataaatgat ggtctgtatt cccgactggt tatttctact 201 tttcgtattt agtacgattc ttcagtcggg aattaatttc tatggtacct 251 ttcagagtga gcgaatttcc gcgaagctat ccagccttgc tagccgtttc 301 gacgagctgt ttcttgcgtt acaacaagtg gtgtttgctc ggaatcgagc 351 ctcaagttcg cgagccgttg actctagagg aaggcgagga ctttcttcaa 401 ttccagaagg aagtgaagaa attgctgaag cttaaggtta gttttaagcg 451 taagtgttgt ttgtacgagg acatatacaa gaagtatggc ggttcagagt 501 caaaagagaa agtatactcc tccggccagt tggacgagga agaggaagac 551 gaccggtggg aggacagttt cgaagaaata ccaatggaag agaccggttc 601 gaagtaaccg ggctgtgaag ttgaagatgt atgacgacat gttaggtgca 651 tctggagttg gatctaccat cagtaatgat gggatgatca ctatgttgaa 701 caactatgtt caaggaattg gtgatagcca gaggtcaaac aacttgaccg 751 ttaccaggca tttgaagttt gatatgtctc ttatggctag tggtgcattt 801 tgggcgagtc ctaactatat gactcaatat cattgggtta ttgtggatcg 851 tgatgttggt tctacgtttc cgactcagtt gagtactatc tttgatattc 901 cgactggtgg tcaggctatg ccttccactt atcggattag gagggatgcg 951 aatgaacgat ttatcgtgaa gaagaagtgg cagactcatt tgatgtctac 1001 tggtactgat tatggaggaa agcagaccta taaggcgcct tcaatgccta 1051 attataagaa agctatgaac attaatattc ggaatatcaa tgtcaagaca 1101 ttgtggaagg acactggagg tggcaaatat gaagatgtga aggagaatgc 1151 tattctttac gtagtggtta atgataatac tgataataca aatatgtatg 1201 ctactttgtt tggtaattgt agggcttatt tctattgatt attagaaatg 1251 cccaatgatg ttgaagttga ataaaaaatt tattattaaa tttgtttgtg 1301 taagattgaa atgtagatat gtaaatatct agtataattg ccttggaaaa 1351 caaaaaacga aaaaatgatt gccggaaaac gaaaaaaaaa cccctcagaa 1401 attagatccc cggaaaatca atatatttat attaatctgc agcccatcca 1451 cgaagtggat gttacatatt tcgaagaaat agcttaacta taccaaactt 1501 catcacttgc taagtaatat acatcgcaat tagcgtaaaa ccaatctttc 1551 atagattcac tcatacaagg tatccagtcc atatctggat tagtaatagc 1601 aatacaaggt cttccgcctg gaatgactaa gtttggttta tgttttatcc 1651 aaacactata atcttcgtta catccgataa tagatttaaa caactcctgt 1701 tgtatttttt gatagcggat atcgtctatt atatggtatg tagtgtggtc 1751 tatatcgtat agagaccaat ctaataccat gccagacata tagtggtgtc 1801 ggcctagaga tcttgcccac tgggtctttc ctgttctgga tggtccgcat 1851 atgtagagac ttcttggtcg gactggtctg ttgtctggct cctggacaaa 1901 ttaagtacgt tagtgtcttc actacatgtt agatcgcgac taagtcgatc 1951 taggtggaag tattcttcaa gagtcatttg tctgtcttga agaattgctc 2001 ccctgcaatt ctcacatatt tcgtaatgta aacaatctga acttacgaaa 2051 tatatatttt gttccgccca ctctttgata gtgtcaggta gcctagagaa 2101 ctccgtccat ctgggtgtgt aaggttgcac aactggcctg aaatgatagt 2151 tggcgaagga tagaatggaa ggccatctga gaacgaagtc tgttgggcag 2201 gactctcgta tgttactgaa gaactcctcc ttggtgttgg atgaatcaag 2251 aattcgtctc cattccacgt tgctgttgcc aatattgttt ggagagcgcc 2301 ctcccagtcg aagctctcca aatgttctag ggctcgtgtc ctccttggtg 2351 atatactcga atgctcgctt tggggcgttg agtccgtcga ttcttgggtg 2401 aatcgttcga ccgtctggga gtatgatgtt gaaaaacagg ttcccattta 2451 cgtcgagttt cttgtcacac tggataatac agtgtgtgtg gaatcctcct 2501 tcaggttgtt cttcagtagg ctgatgatgt tctagtgata ctgcaaggaa 2551 tagaatcaca tatgattcta ataaggtctt cagtttctcg aatatataat 2601 ctttaaaatc cccccctatt tgggaatatg ttagaaaagc atttttcttt 2651 tgaaaacgta aataaccggg ttggttaggg gtaggtctgt ttctgtttgg 2701 agcacgtggc atgtttgttt ttgtttccct cttccgtaca atgaatgaaa 2751 agaaattgta tatatgagag gaagaggaac ttaagaggaa tgaggaactg 2801 aagagggagg tagagggata aataggtaaa cgcggataac attcc