Sequence of DPV Beet curly top Iran virus

Beet curly top Iran virus isolate IR:Kam:B24K:Sug:08, complete genome.

ACC No: JQ707943

Dated: 2013-01-29 | Length: 2845 | CRC: -221703587

                
ID   JQ707943; SV 1; circular; genomic DNA; STD; VRL; 2845 BP.
XX
AC   JQ707943;
XX
DT   28-MAY-2012 (Rel. 112, Created)
DT   29-JAN-2013 (Rel. 115, Last updated, Version 3)
XX
DE   Beet curly top Iran virus isolate IR:Kam:B24K:Sug:08, complete genome.
XX
KW   .
XX
OS   Beet curly top Iran virus
OC   Viruses; ssDNA viruses; Geminiviridae; Curtovirus.
XX
RN   [1]
RP   1-2845
RX   PUBMED; 23081676.
RA   Heydarnejad J., Keyvani N., Razavinejad S., Massumi H., Varsani A.;
RT   "Fulfilling Koch's postulates for beet curly top Iran virus and proposal
RT   for consideration of new genus in the family Geminiviridae";
RL   Arch. Virol. 158(2):435-443(2013).
XX
RN   [2]
RP   1-2845
RA   Heydarnejad J., Varsani A.;
RT   "Fulfilling the Koch's postulate for Beet curly top Iran virus, a unique
RT   geminivirus with a mastrevirus-like replication associated protein and
RT   curtovirus-like capsid protein";
RL   Unpublished.
XX
RN   [3]
RP   1-2845
RA   Heydarnejad J., Varsani A.;
RT   ;
RL   Submitted (25-FEB-2012) to the INSDC.
RL   Plant Protection, Shahid Bahonar University of Kerman, 22 Bahman Ave,
RL   Kerman 7616914111, Iran
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2845
FT                   /organism="Beet curly top Iran virus"
FT                   /host="Beta vulgaris"
FT                   /isolate="IR:Kam:B24K:Sug:08"
FT                   /mol_type="genomic DNA"
FT                   /country="Iran:Kamal-Abad, Kerman"
FT                   /collected_by="J. Heydarnejad"
FT                   /collection_date="2008"
FT                   /clone="B24K"
FT                   /db_xref="taxon:391228"
FT   gene            166. .435
FT                   /gene="V3"
FT   CDS             166. .435
FT                   /codon_start=1
FT                   /gene="V3"
FT                   /product="ss-ds DNA regulator"
FT                   /db_xref="InterPro:IPR009997"
FT                   /db_xref="UniProtKB/TrEMBL:I3QQ92"
FT                   /protein_id="AFK14052.1"
FT                   /translation="MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRF
FT                   DELFLALQQVVFARNRASSSRAVDSRGRRGLSSIPEGSEEIAEA"
FT   gene            242. .607
FT                   /gene="V2"
FT   CDS             242. .607
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR009931"
FT                   /db_xref="UniProtKB/TrEMBL:I3QQ93"
FT                   /protein_id="AFK14053.1"
FT                   /translation="MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIEPQVREPLTL
FT                   EEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDD
FT                   RWEDSFEEIPMEETGSK"
FT   gene            486. .1238
FT                   /gene="V1"
FT   CDS             486. .1238
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:I3QQ89"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:I3QQ89"
FT                   /protein_id="AFK14054.1"
FT                   /translation="MAVQSQKRKYTPPASWTRKRKTTGGRTVSKKYQWKRPVRSNRAVK
FT                   LKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGA
FT                   FWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKK
FT                   KWQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENA
FT                   ILYVVVNDNTDNTNMYATLFGNCRAYFY"
FT   gene            complement(1484. .1789)
FT                   /gene="C2"
FT   CDS             complement(1484. .1789)
FT                   /codon_start=1
FT                   /gene="C2"
FT                   /product="hypothetical RepB"
FT                   /db_xref="UniProtKB/TrEMBL:I3QQB5"
FT                   /protein_id="AFK14055.1"
FT                   /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS
FT                   VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS"
FT   gene            complement(1804. .2712)
FT                   /gene="C1"
FT   CDS             complement(1804. .2712)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="hypothetical RepA"
FT                   /db_xref="GOA:I3QQ96"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:I3QQ96"
FT                   /protein_id="AFK14056.1"
FT                   /translation="MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK
FT                   TLLESYVILFLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTI
FT                   HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNNIGNSNVEWRRILDSSNTKEE
FT                   FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF
FT                   VSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSRDLTCSEDTNVLNLSRSQTTDQS
FT                   DQEVSTYADHPEQERPSGQDL"
XX
SQ   Sequence 2845 BP; 804 A; 490 C; 661 G; 890 T; 0 other;

jq707943 Length: 2845  29-JAN-2013  Type: N  Check: 8791  ..

       1  ccgcgtttac ctttccacgt ggcgtatgct gagtgggcgg acggttgagt
      51  ggggaacacg ctttacttta aattaaagta aagtagcact aagtgggacc
     101  cacttttttt atttctttaa agactttctt tttaagtctt ctagatgcgt
     151  atattatacg tataaatgat ggtctgtatt cccgactggt tatttctact
     201  tttcgtattt agtacgattc ttcagtcggg aattaatttc tatggtacct
     251  ttcagagtga gcgaatttcc gcgaagctat ccagccttgc tagccgtttc
     301  gacgagctgt ttcttgcgtt acaacaagtg gtgtttgctc ggaatcgagc
     351  ctcaagttcg cgagccgttg actctagagg aaggcgagga ctttcttcaa
     401  ttccagaagg aagtgaagaa attgctgaag cttaaggtta gttttaagcg
     451  taagtgttgt ttgtacgagg acatatacaa gaagtatggc ggttcagagt
     501  caaaagagaa agtatactcc tccggccagt tggacgagga agaggaagac
     551  gaccggtggg aggacagttt cgaagaaata ccaatggaag agaccggttc
     601  gaagtaaccg ggctgtgaag ttgaagatgt atgacgacat gttaggtgca
     651  tctggagttg gatctaccat cagtaatgat gggatgatca ctatgttgaa
     701  caactatgtt caaggaattg gtgatagcca gaggtcaaac aacttgaccg
     751  ttaccaggca tttgaagttt gatatgtctc ttatggctag tggtgcattt
     801  tgggcgagtc ctaactatat gactcaatat cattgggtta ttgtggatcg
     851  tgatgttggt tctacgtttc cgactcagtt gagtactatc tttgatattc
     901  cgactggtgg tcaggctatg ccttccactt atcggattag gagggatgcg
     951  aatgaacgat ttatcgtgaa gaagaagtgg cagactcatt tgatgtctac
    1001  tggtactgat tatggaggaa agcagaccta taaggcgcct tcaatgccta
    1051  attataagaa agctatgaac attaatattc ggaatatcaa tgtcaagaca
    1101  ttgtggaagg acactggagg tggcaaatat gaagatgtga aggagaatgc
    1151  tattctttac gtagtggtta atgataatac tgataataca aatatgtatg
    1201  ctactttgtt tggtaattgt agggcttatt tctattgatt attagaaatg
    1251  cccaatgatg ttgaagttga ataaaaaatt tattattaaa tttgtttgtg
    1301  taagattgaa atgtagatat gtaaatatct agtataattg ccttggaaaa
    1351  caaaaaacga aaaaatgatt gccggaaaac gaaaaaaaaa cccctcagaa
    1401  attagatccc cggaaaatca atatatttat attaatctgc agcccatcca
    1451  cgaagtggat gttacatatt tcgaagaaat agcttaacta taccaaactt
    1501  catcacttgc taagtaatat acatcgcaat tagcgtaaaa ccaatctttc
    1551  atagattcac tcatacaagg tatccagtcc atatctggat tagtaatagc
    1601  aatacaaggt cttccgcctg gaatgactaa gtttggttta tgttttatcc
    1651  aaacactata atcttcgtta catccgataa tagatttaaa caactcctgt
    1701  tgtatttttt gatagcggat atcgtctatt atatggtatg tagtgtggtc
    1751  tatatcgtat agagaccaat ctaataccat gccagacata tagtggtgtc
    1801  ggcctagaga tcttgcccac tgggtctttc ctgttctgga tggtccgcat
    1851  atgtagagac ttcttggtcg gactggtctg ttgtctggct cctggacaaa
    1901  ttaagtacgt tagtgtcttc actacatgtt agatcgcgac taagtcgatc
    1951  taggtggaag tattcttcaa gagtcatttg tctgtcttga agaattgctc
    2001  ccctgcaatt ctcacatatt tcgtaatgta aacaatctga acttacgaaa
    2051  tatatatttt gttccgccca ctctttgata gtgtcaggta gcctagagaa
    2101  ctccgtccat ctgggtgtgt aaggttgcac aactggcctg aaatgatagt
    2151  tggcgaagga tagaatggaa ggccatctga gaacgaagtc tgttgggcag
    2201  gactctcgta tgttactgaa gaactcctcc ttggtgttgg atgaatcaag
    2251  aattcgtctc cattccacgt tgctgttgcc aatattgttt ggagagcgcc
    2301  ctcccagtcg aagctctcca aatgttctag ggctcgtgtc ctccttggtg
    2351  atatactcga atgctcgctt tggggcgttg agtccgtcga ttcttgggtg
    2401  aatcgttcga ccgtctggga gtatgatgtt gaaaaacagg ttcccattta
    2451  cgtcgagttt cttgtcacac tggataatac agtgtgtgtg gaatcctcct
    2501  tcaggttgtt cttcagtagg ctgatgatgt tctagtgata ctgcaaggaa
    2551  tagaatcaca tatgattcta ataaggtctt cagtttctcg aatatataat
    2601  ctttaaaatc cccccctatt tgggaatatg ttagaaaagc atttttcttt
    2651  tgaaaacgta aataaccggg ttggttaggg gtaggtctgt ttctgtttgg
    2701  agcacgtggc atgtttgttt ttgtttccct cttccgtaca atgaatgaaa
    2751  agaaattgta tatatgagag gaagaggaac ttaagaggaa tgaggaactg
    2801  aagagggagg tagagggata aataggtaaa cgcggataac attcc