Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus isolate 125-Dargaz replication-associated protein (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and precoat protein (V2) and coat protein (V1) genes, partial cds.
ACC No: JQ928338
Dated: 2012-10-03 | Length: 1178 | CRC: -1894796168
ID JQ928338; SV 1; linear; genomic DNA; STD; VRL; 1178 BP. XX AC JQ928338; XX DT 03-OCT-2012 (Rel. 114, Created) DT 03-OCT-2012 (Rel. 114, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate 125-Dargaz replication-associated DE protein (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and DE precoat protein (V2) and coat protein (V1) genes, partial cds. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1178 RA Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S., RA Zaki Aghl M.; RT "Genetic diversity of TYLCV in Iran"; RL Unpublished. XX RN [2] RP 1-1178 RA Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S., RA Zaki Aghl M.; RT ; RL Submitted (10-APR-2012) to the INSDC. RL Plant Protection, Ferdowsi University, Azadi Square, Mashhad, Khorasan RL Razavi 9177948978, Iran XX FH Key Location/Qualifiers FH FT source 1. .1178 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="125-Dargaz" FT /mol_type="genomic DNA" FT /country="Iran:Dargaz, Khorasan Razavi" FT /collected_by="Sara Gharouni Kardani" FT /collection_date="03-Jul-2010" FT /db_xref="taxon:10832" FT gene complement(<1. .607) FT /gene="C1" FT CDS complement(<1. .607) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /protein_id="AFT82976.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLLALNTPTNKKFIRVA FT HELHEDGSPHLHVLIQFEGKYQCKNQRFFDLSSPSRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGIFQIDGRSARGGQQSANDAYAEALNSGRKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENV" FT gene complement(163. .471) FT /gene="C4" FT CDS complement(163. .471) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /protein_id="AFT82977.1" FT /translation="MNYMKMGLLISMFSSSSKESTSVRTNDSSIYPLQAGQHISIRTFR FT QLRAQQMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAENPRPSIY" FT gene 919. .>1178 FT /gene="V2" FT CDS 919. .>1178 FT /codon_start=1 FT /gene="V2" FT /product="precoat protein" FT /protein_id="AFT82978.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLVRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCFP" FT gene 1079. .>1178 FT /gene="V1" FT CDS 1079. .>1178 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /protein_id="AFT82979.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAS" XX SQ Sequence 1178 BP; 328 A; 233 C; 251 G; 366 T; 0 other; jq928338 Length: 1178 03-OCT-2012 Type: N Check: 1668 .. 1 tgacgttctc tgacacccat acttcaagtt catctggaac ttgattaaaa 51 gatgaagata aaaagggaga aatataagga gccggaggct cttgaaaaat 101 cctatctaaa tttgaactta aattatgaaa ttgtaaaata taatcctttg 151 gggccttctc tttcaatata ttgagggcct cggattttct gcctgaattg 201 agtgcttcgg catatgcgtc gttggcagat tgctgacctc ctctagctga 251 tctgccatcg atttggaaaa ttccaaaatc aatgaagtct ccgtctttct 301 ccacgtaggt cttgacatct gttgagctct tagctgcctg aatgttcgga 351 tggaaatgtg ctgacctgct tggagaggat aaatcgaaga atcgttggtt 401 cttacactgg tactttcctt cgaactggat gagaacatgg agatgaggag 451 acccatcttc atgtagttca tgcgcaactc gtatgaattt cttgttagtt 501 ggtgtattta gggcaagtaa ttgggaaagt gcttcttctt tagagagaga 551 acaattagga taagtcagga aataattttt ggcatatatt ttaaatagac 601 gaggcatggt gaaatgaatc ggtgtccctc aaaactctat ggcaatcggt 651 gtatccggtg tcttacttat acctagacac ccaatggcta tttggtaatt 701 tcgtaaaagt aaatgtaatt caaaattcaa aattcaaaaa tcaaatcatt 751 aaagcggcca tccgtataat attaccggat ggccgcgctt tttttttatg 801 tggtccccac gagtgttccg cagacgtcac tgtcaaccaa tcaaattgca 851 tcctcaaacg ttagataagt attgatttgt ctatatatac ttggtcccca 901 agtattttgt cttgcaatat gtgggaccca cttctaaatg aatttcctga 951 atctgttcac ggatttcgtt gtatgttagc tattaaatat ttgcagtccg 1001 ttgaggaaac ttacgagccc aatacattgg gccacgattt agttagggat 1051 cttatatctg ttgtaagggc ccgtgactat gtcgaagcga ccaggcgata 1101 taatcatttc cacgcccgtc tcgaaggttc gccgaaggct gaacttcgac 1151 agcccataca gcagccgtgc tgcttccc