Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus isolate 205-Sabzevar replication-associated protein (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and precoat protein (V2) and coat protein (V1) genes, partial cds.
ACC No: JQ928342
Dated: 2012-10-03 | Length: 1153 | CRC: -1987799652
ID JQ928342; SV 1; linear; genomic DNA; STD; VRL; 1153 BP.
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AC JQ928342;
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DT 03-OCT-2012 (Rel. 114, Created)
DT 03-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE Tomato yellow leaf curl virus isolate 205-Sabzevar replication-associated
DE protein (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and
DE precoat protein (V2) and coat protein (V1) genes, partial cds.
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KW .
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OS Tomato yellow leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-1153
RA Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA Zaki Aghl M.;
RT "Genetic diversity of TYLCV in Iran";
RL Unpublished.
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RN [2]
RP 1-1153
RA Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA Zaki Aghl M.;
RT ;
RL Submitted (10-APR-2012) to the INSDC.
RL Plant Protection, Ferdowsi University, Azadi Square, Mashhad, Khorasan
RL Razavi 9177948978, Iran
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FH Key Location/Qualifiers
FH
FT source 1. .1153
FT /organism="Tomato yellow leaf curl virus"
FT /host="Solanum lycopersicum"
FT /isolate="205-Sabzevar"
FT /mol_type="genomic DNA"
FT /country="Iran:Khorasan Razavi province, Sabzevar"
FT /collected_by="Sara Gharouni Kardani"
FT /collection_date="17-Sep-2009"
FT /db_xref="taxon:10832"
FT gene complement(<1. .578)
FT /gene="C1"
FT CDS complement(<1. .578)
FT /codon_start=1
FT /gene="C1"
FT /product="replication-associated protein"
FT /protein_id="AFT82992.1"
FT /translation="MPRLFKINAKNYFLTYPNCSLSKEEALSQLLALNTPTNKKFIRVA
FT HELHEDGSPHLHVLIQFEGKYQCKNQRFFDLSSPSRSAHFHPNIQAAKSSTDVKTYVEK
FT DGDFIDFGIFQIDSRSARGGQQSANDAYAEALNSGRKSEALNILKEKAPKDYILQFHNL
FT SSNLDRIFQEPPAPYISPFLSSSFNQVPD"
FT gene complement(134. .442)
FT /gene="C4"
FT CDS complement(134. .442)
FT /codon_start=1
FT /gene="C4"
FT /product="C4 protein"
FT /protein_id="AFT82993.1"
FT /translation="MNYMKMGLLISMFSSSSKESTNVRTNGSSIYPLQAGQHISIRTFR
FT QLRAQQMSRPTWRKTETSLILEFSKSIADQLEEVSNLPTTHMPKHSIQAENPRPSIY"
FT gene 893. .>1153
FT /gene="V2"
FT CDS 893. .>1153
FT /codon_start=1
FT /gene="V2"
FT /product="precoat protein"
FT /protein_id="AFT82994.1"
FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLVRDL
FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCP"
FT gene 1053. .>1153
FT /gene="V1"
FT CDS 1053. .>1153
FT /codon_start=1
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="AFT82995.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVP"
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SQ Sequence 1153 BP; 320 A; 223 C; 248 G; 362 T; 0 other;
jq928342 Length: 1153 03-OCT-2012 Type: N Check: 1105 ..
1 tcatctggaa cttgattaaa agatgaagat aaaaagggag aaatataagg
51 agctggaggc tcctgaaaaa tcctatctaa atttgaactt aaattatgaa
101 attgtaaaat ataatccttt ggggccttct ctttcaatat attgagggcc
151 tcggattttc tgcctgaatt gagtgcttcg gcatatgcgt cgttggcaga
201 ttgctgacct cctctagctg atctgctatc gatttggaaa attccaaaat
251 caatgaagtc tccgtctttc tccacgtagg tcttgacatc tgttgagctc
301 ttagctgcct gaatgttcgg atggaaatgt gctgacctgc ttggagagga
351 taaatcgaag aaccgttggt tcttacattg gtactttcct tcgaactgga
401 tgagaacatg gagatgagga gacccatctt catgtagttc atgcgcaact
451 cgtatgaatt tcttgttagt tggtgtattt agggcaagta attgggaaag
501 tgcttcttct ttagagagag aacaattagg ataagtcagg aaataatttt
551 tggcatttat tttaaataga cgaggcatga tgaaatgaat cggtgtccct
601 caaagctcta cagcaatcgg tgtatccgga gtcttattta tacctagact
651 ccgaatggct atttggtaat ttcgtaaaag tataatgtaa ttcaaaattc
701 aaaattcaaa aatcaaatca ttaaagcggc catccgtata atattaccgg
751 atggccgcgc cttttctttt tatgtggtcc ccacgagtgt tccgcagacg
801 tcactgtcaa ccaatcaaat tgcatcctca aacgttagat aagtgttcat
851 ttgtttatat atacttggtc cccaagtatt ttgttttgca atatgtggga
901 cccacttcta aatgaatttc ctgaatctgt tcacggattt cgttgtatgt
951 tagctattaa atatttgcag tccgttgagg aaacttacga gcccaataca
1001 ttgggccacg atttagttag ggatcttata tctgttgtaa gggcccgtga
1051 ctatgtcgaa gcgaccaggc gatataatca tttccacgcc cgtctcgaag
1101 gttcgccgaa ggctgaactt cgacagccca tacagcagcc gtgctgctgt
1151 ccc