Sequence of DPV Rice black streaked dwarf virus
Rice black streaked dwarf virus isolate SDLC8 P8 gene, complete cds.
ACC No: JX047233
Dated: 2013-05-31 | Length: 1936 | CRC: 736222570
ID JX047233; SV 1; linear; genomic RNA; STD; VRL; 1936 BP. XX AC JX047233; XX DT 31-MAY-2013 (Rel. 116, Created) DT 31-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Rice black streaked dwarf virus isolate SDLC8 P8 gene, complete cds. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Fijivirus; OC Fijivirus group 2. XX RN [1] RP 1-1936 RA Yin X., Li X.D.; RT "Genetic diversity and population structure of Rice black-streaked dwarf RT virus in China"; RL Unpublished. XX RN [2] RP 1-1936 RA Yin X., Li X.D.; RT ; RL Submitted (10-MAY-2012) to the INSDC. RL Department of Plant Pathology, Shandong Agricultural University, 61 Daizong RL Street, Tai'an, Shandong 271018, China XX FH Key Location/Qualifiers FH FT source 1. .1936 FT /organism="Rice black streaked dwarf virus" FT /segment="8" FT /host="Zea mays" FT /isolate="SDLC8" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Aug-2008" FT /db_xref="taxon:10990" FT CDS 25. .1800 FT /codon_start=1 FT /product="P8" FT /note="minor core protein" FT /protein_id="AGE44080.1" FT /translation="MTGTHDDRISLRLLFFNLWNKKRPNDPINHRKTKKKLKPQTANPT FT SNPILISPSITEYAEQISDEFAKARKPILVPTQIFSAFTRLETIFNRTGSYPDLFSNPI FT KYLGFLIFMPDVSMHLDSPTVDHSYYNLKRNHKMSFDELQSNLTSRMLTGQIVKTETND FT LAERFETYYFDPRCERTSIGFLKRTAIVRFEFLSYKYNNDLTLSEREKLPVWASHLIAR FT MNVENVSLPLEISCSAINPTQHFAVIVLKNAKTNVTRGRFWTVLDDERGFLSVKTDIQA FT IEFERNSVTTAGNLRHVLNNCLTLGEPFAFDPLDYSFKLNLLETGLSPLDDVVTIRLKD FT LLRVFKEGQDVQIIGNKGVGKSEIGAMLAERYPHLLVVDSDDYGRFLVMLLNLVPSLFK FT NFDFEINEELLTEEIYFQAMSDFIKAKQTEGVSLQTIFEYVMEGILLPNTIESGEANEE FT VILDIFNRVFHSIQGSKFIGYRKFMIEYTRLMYTNFNKSQTCHFVHSYCELSFVPHSLA FT YITLYSSYNSAVLNVVPRNGQVECSSSKMMANTLLHHFYERYTSNMNPTPVFLFSYFFG FT LTKGLNVLKASSIIV" XX SQ Sequence 1936 BP; 602 A; 335 C; 334 G; 665 T; 0 other; jx047233 Length: 1936 31-MAY-2013 Type: N Check: 6948 .. 1 aagttttttt cgcactgtct aaagatgact ggcacccatg acgaccggat 51 ttctttaaga cttttattct tcaacttatg gaacaaaaaa cgaccaaacg 101 acccaattaa ccaccgaaaa acgaagaaaa agctaaaacc tcaaacagca 151 aatcctacat caaaccccat tttgatatcc ccttcaatta ctgagtatgc 201 tgaacagata tcagacgaat ttgctaaggc tcgaaaaccg attttagtcc 251 cgactcaaat attttccgct ttcactagac ttgaaacgat tttcaacaga 301 acaggctctt accctgattt gttcagtaat ccaatcaaat acctcggatt 351 tttaatcttc atgcccgatg tttcaatgca tttagattct cccactgttg 401 atcattcata ttataacttg aagagaaatc ataaaatgag ctttgatgaa 451 cttcaatcaa atttaacttc ccgaatgtta actggccaaa ttgtgaagac 501 tgagactaat gatcttgcgg aacgttttga aacttattac tttgacccta 551 gatgtgaaag aacaagcatt ggatttttga aaagaaccgc gattgtaaga 601 tttgaattct tatcttataa atacaacaat gatttaacac tgtcggaacg 651 tgaaaaatta cctgtttggg cttctcattt aatagctcgt atgaacgttg 701 aaaatgtttc tttaccattg gaaattagtt gtagtgcaat caatcccacc 751 caacattttg ctgttatagt tcttaaaaat gctaaaacca atgtgacaag 801 aggcagattc tggaccgtgt tggacgatga acgtggcttt ttatctgtta 851 aaaccgatat tcaagcgatt gaatttgaac gtaattctgt aactactgct 901 ggcaatttaa gacatgtttt aaacaattgt ttaacattgg gcgaaccctt 951 cgccttcgac ccacttgatt attcttttaa acttaactta cttgaaacag 1001 ggttatctcc attagatgac gttgtgacca ttagattgaa agatctgttg 1051 cgtgtgttca aagaaggaca ggatgttcaa attattggta ataaaggagt 1101 aggtaagtct gaaattggcg caatgttagc agaacgatat ccccatcttt 1151 tagttgttga tagtgatgat tatggcaggt ttttggtaat gttgcttaat 1201 ttagttcctt cattgtttaa aaattttgat tttgaaatta acgaagaact 1251 tttaacagaa gaaatttatt ttcaagctat gtctgatttt attaaagcta 1301 aacaaactga aggtgtttca cttcaaacga tttttgagta tgtgatggaa 1351 ggaatccttc ttccaaacac tattgagagt ggagaagcta atgaggaagt 1401 cattttagac atttttaatc gtgtttttca tagcatccaa ggttctaaat 1451 ttattggata tcgtaagttc atgattgaat atacgcgtct gatgtacact 1501 aattttaaca agagtcaaac ttgtcatttc gttcactctt attgtgaatt 1551 atcgttcgtt cctcattctt tggcttatat tactttatac agtagttaca 1601 actcagctgt gttaaatgtt gttcctagaa acggacaagt agaatgcagt 1651 tcctcaaaga tgatggccaa tacgctactt catcattttt acgaaagata 1701 tacctctaat atgaatccaa ccccagtatt tttgttttct tatttctttg 1751 gtttaaccaa aggtttaaat gttctaaaag cttcatctat tattgtgtaa 1801 cattactatg tttttgtgaa gaatatcatg tccttttagg gttcgattcg 1851 tataaaggtg tttcagtcca atatcttgat ggcagactag gtcgatgttt 1901 gattctagtg aagtgtgcga aaattcagct attgtc