Sequence of DPV Grapevine leafroll-associated virus 3

Grapevine leafroll-associated virus 3 isolate WHZH37-2 coat protein (CP) gene, complete cds.

ACC No: JX088172

Dated: 2012-08-16 | Length: 942 | CRC: -318420549

                
ID   JX088172; SV 1; linear; genomic RNA; STD; VRL; 942 BP.
XX
AC   JX088172;
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DT   16-AUG-2012 (Rel. 113, Created)
DT   16-AUG-2012 (Rel. 113, Last updated, Version 1)
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DE   Grapevine leafroll-associated virus 3 isolate WHZH37-2 coat protein (CP)
DE   gene, complete cds.
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KW   .
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OS   Grapevine leafroll-associated virus 3
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Ampelovirus.
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RN   [1]
RP   1-942
RA   Farooq A.B., Ma Y., Hong N.;
RT   "Genetic Diversity of GLRaV-3 in China";
RL   Unpublished.
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RN   [2]
RP   1-942
RA   Farooq A.B., Ma Y., Hong N.;
RT   ;
RL   Submitted (20-MAY-2012) to the INSDC.
RL   Plant Sciences and Technology, Huazhong Agricultural University, Wuhan,
RL   Hubei 430070, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .942
FT                   /organism="Grapevine leafroll-associated virus 3"
FT                   /host="grapevine"
FT                   /isolate="WHZH37-2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:55951"
FT   gene            1. .942
FT                   /gene="CP"
FT   CDS             1. .942
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AFP55655.1"
FT                   /translation="MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQ
FT                   AELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVF
FT                   EKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDD
FT                   TTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYE
FT                   NPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAI
FT                   LAWNLARQQAFRNKTVTADNTLHNVFQVLQKK"
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SQ   Sequence 942 BP; 300 A; 187 C; 246 G; 209 T; 0 other;

jx088172 Length: 942  16-AUG-2012  Type: N  Check: 4876  ..

       1  atggcgtttg aactgaaatt agggcagata tatgaagttg tccccgaaaa
      51  caatctgaga gttagagtag gggatgcggc acaaggaaag tttagtaagg
     101  cgagtttctt aaaatacgtt aaggacggga cgcaggcgga gttaacagga
     151  atcgctgtag tgccggaaaa gtacgtgttc gccacagcag ctttagctac
     201  agcggcacag gagccaccta agcagccgac aacgcaagtg gtggaaccac
     251  cagaagccga tataggggtg gtgccggaat ctgagactct tacaccaaat
     301  aagctggttt ttgagaaaga tccagacaag ttcttaaaga ctatgggtaa
     351  ggggatagct ttggacttaa caggggttac ccataaaccg aaagttatta
     401  acgagccggg aaaagtatca gtagaggtag caatgaagat taataccgca
     451  ttggtagagc tgtgtaagaa ggttatgggc tcagatgaca caacaaccaa
     501  gacaaaattc ttcttgtacg tgatgcagat cgcttgcacg ttctttacat
     551  cgtcttcgac agagttcaaa gagttcgact acatagaaac ggacgatgga
     601  aagaagatat atgcggtgtg ggtatacgat tgcattaaac aagctgccgc
     651  ttcaacgggt tacgaaaacc cggtaaggca gtatctagca tacttcacgc
     701  caaccttgat cacggcgacc ctgaatggta aactggtgat gaatgaaaag
     751  gtcatggcac agcatggagt accaccgaaa ttctttccgt acgcgattga
     801  ctgcgttcgt ccgacgtacg atctgttcaa taacgacgca atactagcat
     851  ggaatttagc tagacagcag gcgtttagaa ataagacggt gacggccgat
     901  aacaccttac acaacgtctt ccaagtattg cagaagaaat ag