Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 6B coat protein (CP) gene, complete cds.
ACC No: JX090143
Dated: 2012-07-31 | Length: 672 | CRC: -237421716
ID JX090143; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC JX090143; XX DT 31-JUL-2012 (Rel. 113, Created) DT 31-JUL-2012 (Rel. 113, Last updated, Version 1) XX DE Citrus tristeza virus isolate 6B coat protein (CP) gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Saponari M., Fontana A., Ferretti L., Albanese G.; RT "Characterization of Citrus tristeza virus population spreading in calabria RT (southern italy): evidences on the presence of severe seedling yellows RT strain"; RL Unpublished. XX RN [2] RP 1-672 RA Saponari M., Fontana A., Ferretti L., Albanese G.; RT ; RL Submitted (20-MAY-2012) to the INSDC. RL Institute of Plant Virology, CNR, via Amendola, 165/a, Bari, Italy 70126, RL Italy XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Satsuma mandarin" FT /isolate="6B" FT /serotype="MCA13 reactive" FT /mol_type="genomic RNA" FT /country="Italy:Calabria" FT /collection_date="2010" FT /note="genotype: VT-like" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /protein_id="AFO65004.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLGTQQNAALNRDLFLTLKGKYPSLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 190 A; 120 C; 178 G; 184 T; 0 other; jx090143 Length: 672 31-JUL-2012 Type: N Check: 5639 .. 1 atggacgacg agacaaagaa attgaagaac aaaaacaagg agacgaaaga 51 aggcgacgat gttgttgcag cagagtcttc tttcggttcc gtgaatttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgggaacc 151 caacagaacg ctgctttgaa cagagatttg tttcttactc tgaaagggaa 201 gtatcctagc ttgtctgaca aggataagga cttccacata gctatgatgt 251 tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc 301 acgggcataa catatactcg ggagggtgtt gaagtggatt tgtctgacaa 351 gctttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc 451 tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt acctatgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaattg 601 ttaaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga