Sequence of DPV Mungbean yellow mosaic virus

Mungbean yellow mosaic virus isolate VN1 segment DNA-B, complete sequence.

ACC No: JX244177

Dated: 2012-09-09 | Length: 2678 | CRC: 2021487048

                
ID   JX244177; SV 1; circular; genomic DNA; STD; VRL; 2678 BP.
XX
AC   JX244177;
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DT   09-SEP-2012 (Rel. 114, Created)
DT   09-SEP-2012 (Rel. 114, Last updated, Version 1)
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DE   Mungbean yellow mosaic virus isolate VN1 segment DNA-B, complete sequence.
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KW   .
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OS   Mungbean yellow mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-2678
RA   Tsai W.S., Shih S.L., Rauf A., Safitri R., Hidayati N., Huyen B.T.T.,
RA   Kenyon L.;
RT   "Mungbean yellow mosaic virus Vietnam isolate";
RL   Unpublished.
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RN   [2]
RP   1-2678
RA   Tsai W.S., Shih S.L., Rauf A., Safitri R., Hidayati N., Huyen B.T.T.,
RA   Kenyon L.;
RT   ;
RL   Submitted (27-JUN-2012) to the INSDC.
RL   Virology, AVRDC-The World Vegetable Center, 60 Yi-Min Liao, Shanhua,
RL   Tainan, Taiwan 74151, Taiwan, R.O.C.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNAMAN v. 5.2.2
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .2678
FT                   /organism="Mungbean yellow mosaic virus"
FT                   /segment="DNA-B"
FT                   /host="mungbean"
FT                   /isolate="VN1"
FT                   /mol_type="genomic DNA"
FT                   /country="Viet Nam"
FT                   /collection_date="02-May-2011"
FT                   /db_xref="taxon:33726"
FT   gene            422. .1192
FT                   /gene="BV1"
FT   CDS             422. .1192
FT                   /codon_start=1
FT                   /gene="BV1"
FT                   /product="BV1"
FT                   /note="NSP"
FT                   /protein_id="AFR11638.1"
FT                   /translation="MYNRNIRTPVKLRRSNFGYRWSSLTPSTSRLRPSKLNVSRKLGYD
FT                   RIDREFRKNTIVEVQHGSHMSLDKNTDISSFVQYPTRGINGDGRSRDYIKLLNLDVSGV
FT                   INVKPTGSDHTMEPGDKMNGLFVLSILLDKKPYLPEGVNTLPSFAELFGPYAAAYANMH
FT                   LLDTQKQRFKVLGTIKKYCSCTSGAIYAPLKLRLRLSKPKCPLWTTFKDPDIGNCGGNY
FT                   KNISKNAIVISYAFISMHSLHVEPYVQFELQYIG"
FT   gene            complement(1218. .2114)
FT                   /gene="BC1"
FT   CDS             complement(1218. .2114)
FT                   /codon_start=1
FT                   /gene="BC1"
FT                   /product="BC1"
FT                   /note="MP"
FT                   /protein_id="AFR11639.1"
FT                   /translation="MENYSGVVVNNKYVETKSCEYRLTNNEMPIKLQFPSYLEQKTVQI
FT                   MGKCMKVDHAVIEYRNQVPFNAKGTVVVTIRDTRLSYEQAAQAAFTFPIACNVDLHYFS
FT                   SSFFSLKDETPWEIVYKVEDSNVIDGTTFAQIKAKLKLSSAKHSTDIRFKPPTINILSK
FT                   DYNENCVDFWSVEKPKPIRRLLNPGPNQDPFSINGQRPIMLQPGETWATRSSIGRSSSM
FT                   RLTSTERLGLTDNASTSEAEYPLRHLHKLPESSLDPGDSISQAQSNSMSRKDIEDIIES
FT                   TISKCLIKQRSNANKAL"
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SQ   Sequence 2678 BP; 783 A; 500 C; 558 G; 837 T; 0 other;

jx244177 Length: 2678  09-SEP-2012  Type: N  Check: 2345  ..

       1  acctgaggac cccgccatcg gtgtatgggt atttcgccca cgtgggtggt
      51  ccctctaaaa cgtggcgcat tctggaaacg cgctgggagg ttatttaaga
     101  ctttgtctac ttgtggtaac aggtaaccgg ctaagtgacc ggttggaaag
     151  cgtgcctttc ccatccctgg caaattacct catatgccat ttggaggaca
     201  caaaacgaca aaacccggga gggcatttat gtcctttgac gaaaaaggac
     251  tttaactatt tatcgtttca aattaaagaa acgatagacg ttgaatatat
     301  cgattttgtg gtgttaaaca atgagcgttg gttgaaaatt taatatttac
     351  aacatttgtc tatttatgca tagagatttt atttgcggat aaaatcaaac
     401  tacttgatgg ttttatagag tatgtacaac cggaacatac gaaccccagt
     451  gaaattacgt agaagtaatt tcgggtacag atggagttct ttaactccgt
     501  caacgagtcg attaagaccg agtaaattaa atgtttcaag gaaactagga
     551  tacgatcgta ttgatcgtga attccgcaaa aataccattg ttgaggttca
     601  acatggaagc catatgtcct tggacaagaa cacggatatt tcatcttttg
     651  ttcagtatcc tactcgtggt attaatggtg atggtcgttc gagggattac
     701  atcaagttat taaaccttga tgtatctggt gttatcaacg taaagcctac
     751  tggcagtgat catacaatgg aacctggtga caaaatgaac gggctattcg
     801  tgttatctat cctgttggac aagaaaccgt atttaccaga aggtgtgaat
     851  acgttaccat cctttgccga attattcggt ccttatgctg ctgcctacgc
     901  aaatatgcat ttgctggata ctcaaaagca gcgatttaag gtcctgggga
     951  ccattaagaa atattgttcc tgtacttctg gagcaatata tgctccatta
    1001  aaattaaggc tgagattgtc gaagccaaag tgtcctttgt ggactacgtt
    1051  taaggaccct gatattggga actgcggtgg aaattataaa aatatttcca
    1101  agaacgcaat tgtaataagc tatgcattta tctctatgca tagcctacat
    1151  gtggaaccat atgttcaatt tgaactacaa tacattggat aaataaataa
    1201  gtacaattta tttaaattta aagggctttg tttgcattag atctctgttt
    1251  tattagacat ttgctaattg tggactctat gatgtcctct atgtccttgc
    1301  gactcattga attcgattga gcttgagaaa ttgaatctcc ggggtctaga
    1351  gaggactccg gtaatttatg caaatgtctt agtggatatt ctgcctcgga
    1401  cgtactcgca ttatcggtta ggcccaatct ttctgtggac gtcaatcgca
    1451  tagaactact gcgcccaata ctggaccttg tagcccaagt ctctccaggc
    1501  tgtagcataa tgggcctttg tccatttatt gaaaagggat cctggttggg
    1551  tccaggattc agcaaccgcc taatgggctt gggcttctca acagaccaaa
    1601  agtccacaca gttttcgttg tagtccttgg acaatatatt tattgtcgga
    1651  ggtttgaatc taatgtctgt tgagtgtttg gctgacgaca atttcagctt
    1701  cgctttaatc tgggcaaatg ttgtcccgtc gatcacattg gagtcttcga
    1751  ccttgtaaac aatttcccat ggagtctcat cctttaaaga aaaaaaggat
    1801  gatgagaaat aatggagatc gacgttacat gctattggga atgtgaacgc
    1851  agcctgtgct gcttgttcgt aactgagtct tgtgtcacgt atagtgacta
    1901  ctactgtccc cttggcgtta aaggggactt gatttcggta ttcaataacg
    1951  gcatggtcaa ccttcataca tttgcccata atttggacag ttttctgttc
    2001  caaataagaa gggaattgta atttgatagg catctcgttg ttcgtcagcc
    2051  tgtattcgca actctttgtt tctacatact tgttgtttac aaccacccct
    2101  gaataattct ccattattca gtaatatgtt gcgaattatc acctgcatat
    2151  gaacatatcc agagaaatta acaatttaat ttcagatagg ccgcgcagcg
    2201  gcagtggaca gtgtttagat ttaaatcata atctaaacca aagaggataa
    2251  taaatgataa gcgataaaaa attatatgca taagatctta cttatgccac
    2301  gactggaatt ttgaggaata ttgtgtacag aggaaataac aaatatttac
    2351  taatatttgt tctccaacta taaatgattg tttgacaaca atcgaattaa
    2401  ataatatgca catctgtttc ggaagcgttg ttcaaacata aaataactca
    2451  tattttattt ggcttaaatg aacgcatagc ggaacccctt ccatttggtg
    2501  taaaagcgct tcaattctag agagagaagc tctcgactag cgcatctaga
    2551  gagagaagca atcggtgtac agccatttaa ctctatgtat cggtgtatcg
    2601  gtgtcttatt tataggtact agagttacta tcactttaga cctactaacc
    2651  ggctctaggg gtcctcagct ataatatt