Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate 6B p20 protein gene, complete cds.

ACC No: JX402741

Dated: 2012-10-05 | Length: 549 | CRC: -439038142

                
ID   JX402741; SV 1; linear; genomic RNA; STD; VRL; 549 BP.
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AC   JX402741;
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DT   01-OCT-2012 (Rel. 114, Created)
DT   05-OCT-2012 (Rel. 114, Last updated, Version 2)
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DE   Citrus tristeza virus isolate 6B p20 protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-549
RA   Ferretti L., Fontana A., Sciarroni R., Schimio R., Loconsole G.,
RA   Albanese G., Saponari M.;
RT   "Molecular and biological evidence for a severe seedling yellows strain of
RT   Citrus tristeza virus spreading in Calabria (southern Italy)";
RL   Unpublished.
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RN   [2]
RP   1-549
RA   Ferretti L., Fontana A., Sciarroni R., Schimio R., Loconsole G.,
RA   Albanese G., Saponari M.;
RT   ;
RL   Submitted (19-JUL-2012) to the INSDC.
RL   CRA-PAV Plant Pathology Research Center, Via C. G. Bertero 22, Rome, Rome
RL   00156, Italy
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FH   Key             Location/Qualifiers
FH
FT   source          1. .549
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus unshiu"
FT                   /isolate="6B"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /isolation_source="Citrus unshiu"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .549
FT                   /codon_start=1
FT                   /product="p20 protein"
FT                   /protein_id="AFS63688.1"
FT                   /translation="MRAYFSVNDYISLLAKVGAAVERLCDPSVTLTEVMDEINDFNSFL
FT                   ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRILLDIIRRRFTRDKLLCTSATD
FT                   VMGFFVMRYMASSHISFESVMRTELKLVVKAVLSDLSRAHKLDFSERAFAAYGILLQKG
FT                   TVATVCGQFDINLVSPSCV"
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SQ   Sequence 549 BP; 143 A; 113 C; 132 G; 161 T; 0 other;

jx402741 Length: 549  05-OCT-2012  Type: N  Check: 3417  ..

       1  atgcgagctt actttagtgt taacgattac ataagccttt tggctaaggt
      51  cggcgcagct gtggaacgtt tgtgcgatcc cagcgtaact ctcacggaag
     101  tgatggacga aattaatgat tttaactcgt ttctcgcttt agtacactct
     151  atgaagtcag acatgaacgg tgatcatcaa gatggtcacc atgagatggg
     201  tgagcacaaa tctcgattgt tgtgcaatat agaggcgaaa ctgcgaatac
     251  ttctcgacat cataagacgt cggtttactc gcgacaagct gctctgtacc
     301  agcgcaacag acgtgatggg cttcttcgtt atgaggtaca tggcttctag
     351  tcacatcagt ttcgaatccg taatgcgaac ggagctgaaa ttagtagtta
     401  aagcagtact atcggattta tcccgcgcgc ataaactaga ttttagcgag
     451  cgagcctttg cggcttacgg tatcctttta caaaaaggta ctgtagcgac
     501  cgtttgtggt cagtttgaca ttaatttagt ttctccatct tgcgtgtag