Sequence of DPV Pineapple mealybug wilt-associated virus 3

Pineapple mealybug wilt-associated virus 3 isolate CU CA MD2 coat protein (Cp) gene, complete cds.

ACC No: JX645774

Dated: 2012-11-11 | Length: 789 | CRC: -197157123

                
ID   JX645774; SV 1; linear; genomic RNA; STD; VRL; 789 BP.
XX
AC   JX645774;
XX
DT   11-NOV-2012 (Rel. 114, Created)
DT   11-NOV-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Pineapple mealybug wilt-associated virus 3 isolate CU CA MD2 coat protein
DE   (Cp) gene, complete cds.
XX
KW   .
XX
OS   Pineapple mealybug wilt-associated virus 3
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Ampelovirus.
XX
RN   [1]
RP   1-789
RA   Hernandez-Rodriguez L.;
RT   "Dissemination of mealybug wilt of pineapple disease and the associated
RT   viruses in Cuba: first report of the Pineapple mealybug wilt-associated
RT   virus-1 presence in the country";
RL   Unpublished.
XX
RN   [2]
RP   1-789
RA   Hernandez-Rodriguez L.;
RT   ;
RL   Submitted (03-SEP-2012) to the INSDC.
RL   Fitopatologia, Instituto de Investigaciones en Fruticultura Tropical,
RL   Avenida 7ma 3005 Playa, Havana City, Havana 10600, Cuba
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .789
FT                   /organism="Pineapple mealybug wilt-associated virus 3"
FT                   /host="Ananas comosus (L.) Merr. cv. MD2"
FT                   /isolate="CU CA MD2"
FT                   /mol_type="genomic RNA"
FT                   /country="Cuba:Ciego de Avila"
FT                   /collected_by="Lester Hernandez-Rodriguez"
FT                   /collection_date="Jun-2012"
FT                   /identified_by="Lester Hernandez"
FT                   /db_xref="taxon:373861"
FT   gene            1. .789
FT                   /gene="Cp"
FT   CDS             1. .789
FT                   /codon_start=1
FT                   /gene="Cp"
FT                   /product="coat protein"
FT                   /protein_id="AFV93993.1"
FT                   /translation="MSKIPVLPPPSAPSTPVQPQLPKADEEQLQEIENLPLPGGRTTVN
FT                   TFTDLISSNNAVLDFTKVGVPRMINITIPGIVAKEHRVKGAKALWELGKSKGISESDKH
FT                   MIQFLMQSFQSFVTHSTSPKVSGASNRTITAKYDNKDVTVSHEEIKTTLDNSLASYGYE
FT                   NTMRQFGRAFTTAIVQGLSSGKMEVNTRICSSHGIPPNYYPYSPDCLHVDARIQGYDAA
FT                   LANELGKMVALNKNAGGKRTQHNLFEETDISPQIFTGNRR"
XX
SQ   Sequence 789 BP; 254 A; 170 C; 172 G; 193 T; 0 other;

jx645774 Length: 789  11-NOV-2012  Type: N  Check: 8601  ..

       1  atgagtaaga ttccagtact acctcctccc tctgcaccat cgactccggt
      51  acaaccgcag ctacccaaag ctgatgagga acaattacag gagattgaaa
     101  atctgcctct acctggaggt aggactacag tgaatacttt cactgatctg
     151  atatcgtcga ataatgcagt attggatttc actaaagtgg gagtaccgcg
     201  gatgatcaac atcaccatac ctgggatagt ggcgaaagaa catcgagtga
     251  agggagccaa agcattatgg gaactaggta agtctaaagg aatctctgaa
     301  agtgacaaac acatgataca gtttctgatg cagagtttcc aaagtttcgt
     351  cactcattcg acatcaccta aggtctcagg tgcttcgaac cgtacaataa
     401  ctgctaagta cgacaacaaa gatgtaacgg tgtctcatga agagataaag
     451  actactttag ataattcact agccagttac ggctatgaaa ataccatgag
     501  acaatttggg agggctttca caactgcaat agttcagggt ttaagttcgg
     551  gcaagatgga ggtaaatact cgaatttgct cttctcacgg tatacctcct
     601  aactactatc cctactctcc agactgctta catgtagacg cacgcataca
     651  aggatatgat gccgctttag caaacgagtt agggaagatg gtagcactca
     701  acaaaaacgc tggaggtaag cgtacgcaac ataacttgtt tgaggagact
     751  gacatatctc ctcaaatatt tacaggtaat cgcagatga