Sequence of DPV Pineapple mealybug wilt-associated virus 3
Pineapple mealybug wilt-associated virus 3 isolate CU CA MD2 coat protein (Cp) gene, complete cds.
ACC No: JX645774
Dated: 2012-11-11 | Length: 789 | CRC: -197157123
ID JX645774; SV 1; linear; genomic RNA; STD; VRL; 789 BP. XX AC JX645774; XX DT 11-NOV-2012 (Rel. 114, Created) DT 11-NOV-2012 (Rel. 114, Last updated, Version 1) XX DE Pineapple mealybug wilt-associated virus 3 isolate CU CA MD2 coat protein DE (Cp) gene, complete cds. XX KW . XX OS Pineapple mealybug wilt-associated virus 3 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Ampelovirus. XX RN [1] RP 1-789 RA Hernandez-Rodriguez L.; RT "Dissemination of mealybug wilt of pineapple disease and the associated RT viruses in Cuba: first report of the Pineapple mealybug wilt-associated RT virus-1 presence in the country"; RL Unpublished. XX RN [2] RP 1-789 RA Hernandez-Rodriguez L.; RT ; RL Submitted (03-SEP-2012) to the INSDC. RL Fitopatologia, Instituto de Investigaciones en Fruticultura Tropical, RL Avenida 7ma 3005 Playa, Havana City, Havana 10600, Cuba XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .789 FT /organism="Pineapple mealybug wilt-associated virus 3" FT /host="Ananas comosus (L.) Merr. cv. MD2" FT /isolate="CU CA MD2" FT /mol_type="genomic RNA" FT /country="Cuba:Ciego de Avila" FT /collected_by="Lester Hernandez-Rodriguez" FT /collection_date="Jun-2012" FT /identified_by="Lester Hernandez" FT /db_xref="taxon:373861" FT gene 1. .789 FT /gene="Cp" FT CDS 1. .789 FT /codon_start=1 FT /gene="Cp" FT /product="coat protein" FT /protein_id="AFV93993.1" FT /translation="MSKIPVLPPPSAPSTPVQPQLPKADEEQLQEIENLPLPGGRTTVN FT TFTDLISSNNAVLDFTKVGVPRMINITIPGIVAKEHRVKGAKALWELGKSKGISESDKH FT MIQFLMQSFQSFVTHSTSPKVSGASNRTITAKYDNKDVTVSHEEIKTTLDNSLASYGYE FT NTMRQFGRAFTTAIVQGLSSGKMEVNTRICSSHGIPPNYYPYSPDCLHVDARIQGYDAA FT LANELGKMVALNKNAGGKRTQHNLFEETDISPQIFTGNRR" XX SQ Sequence 789 BP; 254 A; 170 C; 172 G; 193 T; 0 other; jx645774 Length: 789 11-NOV-2012 Type: N Check: 8601 .. 1 atgagtaaga ttccagtact acctcctccc tctgcaccat cgactccggt 51 acaaccgcag ctacccaaag ctgatgagga acaattacag gagattgaaa 101 atctgcctct acctggaggt aggactacag tgaatacttt cactgatctg 151 atatcgtcga ataatgcagt attggatttc actaaagtgg gagtaccgcg 201 gatgatcaac atcaccatac ctgggatagt ggcgaaagaa catcgagtga 251 agggagccaa agcattatgg gaactaggta agtctaaagg aatctctgaa 301 agtgacaaac acatgataca gtttctgatg cagagtttcc aaagtttcgt 351 cactcattcg acatcaccta aggtctcagg tgcttcgaac cgtacaataa 401 ctgctaagta cgacaacaaa gatgtaacgg tgtctcatga agagataaag 451 actactttag ataattcact agccagttac ggctatgaaa ataccatgag 501 acaatttggg agggctttca caactgcaat agttcagggt ttaagttcgg 551 gcaagatgga ggtaaatact cgaatttgct cttctcacgg tatacctcct 601 aactactatc cctactctcc agactgctta catgtagacg cacgcataca 651 aggatatgat gccgctttag caaacgagtt agggaagatg gtagcactca 701 acaaaaacgc tggaggtaag cgtacgcaac ataacttgtt tgaggagact 751 gacatatctc ctcaaatatt tacaggtaat cgcagatga