Sequence of DPV Tomato leaf curl China virus
Leaf curl China virus - OX2, complete sequence.
ACC No: JX972142
Dated: 2013-05-08 | Length: 2744 | CRC: -859984611
ID JX972142; SV 1; circular; genomic DNA; STD; VRL; 2744 BP. XX AC JX972142; XX DT 08-MAY-2013 (Rel. 116, Created) DT 08-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Leaf curl China virus - OX2, complete sequence. XX KW . XX OS Leaf curl China virus - OX2 OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2744 RA Li Z., Qin B., Cai J.; RT "Molecular Identification of Geminiviruses Infecting Oxalis corniculata RT L."; RL Unpublished. XX RN [2] RP 1-2744 RA Li Z., Qin B., Cai J.; RT ; RL Submitted (15-OCT-2012) to the INSDC. RL Institute of Plant Protection, Guangxi Academy of Agricultural Sciences, RL 174 Daxue East Road, Nanning, Guangxi 530007, China XX FH Key Location/Qualifiers FH FT source 1. .2744 FT /organism="Leaf curl China virus - OX2" FT /segment="DNA A" FT /host="Oxalis corniculata" FT /strain="OX2" FT /mol_type="genomic DNA" FT /country="China:Nanning" FT /collected_by="Zhanbiao Li" FT /identified_by="Zhanbiao Li" FT /db_xref="taxon:1329381" FT gene 129. .479 FT /gene="AV2" FT CDS 129. .479 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /note="coat protein" FT /protein_id="AGK90093.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVVRARDYVEASRRYSHFHSRIQGASPVELRQPLYQPCCCPHCPRHKQKEIMGQSAHV FT SKAQDVQDVQKP" FT gene 289. .1062 FT /gene="AV1" FT CDS 289. .1062 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /protein_id="AGK90094.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYTSRAAAPTVLVTNKRKSW FT VNRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGVGLTH FT RVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPSDFQQVFNVYDNE FT PSTATVKNDQRDRYQVIRRFQATVTGGQYAAKEQAIIRRFYRVNNYVVYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1059. .1463) FT /gene="AC3" FT CDS complement(1059. .1463) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /protein_id="AGK90095.1" FT /translation="MDSRTGELITATQAENGVFIWEITNPLYFKITELQNRPFLSNNDI FT VKVRIQFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVQSSHVIKFNLY" FT gene complement(1204. .1611) FT /gene="AC2" FT CDS complement(1204. .1611) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /protein_id="AGK90096.1" FT /translation="MQSSSASPNQCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSSL FT NCANHGFTHRGTHHCHSGREWRFYLGDNKSPVFQDNGTTKQALPVEQRHSEGQDPIQLQ FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI" FT gene complement(1511. .2596) FT /gene="AC1" FT CDS complement(1511. .2596) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /protein_id="AGK90097.1" FT /translation="MPQPKKFIINARNYFLTYPHCSLTKEETLSQILALATPINKLFIR FT ICRELHEDGSPHLHVLIQFEGKYKCQNKRFFDLTSPTRSAHFHPNIQAAKSSTDVKSYM FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALSILREKAPKDYVLQYH FT NLNNNLDKIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSARPLRPISIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAIFVSITEPMY FT SGTHQSPAQDSQEENNQETED" FT gene complement(2146. .2439) FT /gene="AC4" FT CDS complement(2146. .2439) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /protein_id="AGK90098.1" FT /translation="MGLLTCMCSSNLKANTNAKTKDSSISHPQPGQHISIRTFRQLKAQ FT QMSSPTWTKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSVY" XX SQ Sequence 2744 BP; 726 A; 569 C; 611 G; 838 T; 0 other; jx972142 Length: 2744 08-MAY-2013 Type: N Check: 5968 .. 1 accggaaggc cccccaattt tttaaagtgg tcccccccac tcagtaatgt 51 ccaatcatga ccgcgcctca aagcttaatt attatgtggt cctgtatata 101 acttcggccc caaggagtca ttttaaacat gtgggatcca ttgttaaacg 151 agttcccaga aaccgtacat ggtttcaggt gtatgctcgc cattaagtat 201 ttgcagttgg tagaaaatac atactctccg gatacgttag ggtacgattt 251 aattcgtgat ttaattttag ttgttcgtgc tcgagattat gtcgaagcgt 301 cccgcagata tagtcatttc cactcccgca tccaaggtgc gtcgccggtt 351 gaacttcgac agcccttata ccagccgtgc tgctgccccc actgtcctcg 401 tcacaaacaa aaggaaatca tgggtcaatc ggcccatgta tcgaaagccc 451 aggatgtaca ggatgttcag aagccctgat gttccacgag gctgtgaggg 501 tccgtgtaag gtccaatctt tcgatgcaaa gaatgatatc ggtcacatgg 551 gtaaggtcat atgtctgtct gatgttacaa ggggagtggg tttgacccat 601 cgtgttggta aacgtttctg cgttaagtca ctgtattttg ttggcaagat 651 ttggatggat gaaaacatca aggtgaagaa ccacactaac accgttatgt 701 tctggatagt gagggataga cgtcctagtg gcacccctag tgattttcag 751 caggtcttta atgtttatga taacgagccg tctaccgcta ctgttaagaa 801 cgatcagcgc gatcgttacc aagtgatacg caggtttcag gcaacggtca 851 ctggtggaca atatgcagct aaggaacagg cgataattag aagattttat 901 cgtgttaata attacgtagt gtataatcac caggaagctg ggaagtacga 951 gaaccatact gaaaatgctc tgttgttgta tatggcatgt acgcatgcct 1001 ctaatcccgt gtatgctact ttgaaagtga ggagttattt ctatgactca 1051 gtcacgaatt aataaagatt aaattttatt acatgagaac tttgtacaaa 1101 tgttgtttgc gttaatgcgt cccataatac ataattcact gctctaatta 1151 cattattcaa actaattaca cccaaattat tgagaaactt caaaacttgt 1201 gtcctaaata ctcttaagaa acgaccagtc tgaaggtgtg agttcgtcca 1251 tatccggaag tccagaaaac attggtgcat ccccagtgct ttcctcaggt 1301 tgtagttgaa ttggatcctg accttcacta tgtcgttgtt cgacaggaag 1351 ggcctgtttt gtagttccgt tatcttgaaa tacaggggat ttgttatctc 1401 ccagataaaa acgccattct ctgcctgagt ggcagtgatg agttcccctg 1451 tgcgtgaatc catggttggc gcagttaagt gagctgaaat aagaacaacc 1501 acagggaagg tcaatcctcc gtctcctggt tattttcttc ttggctatcc 1551 tgtgctggac tttgatgggt acctgagtac attggttcgg tgatgctgac 1601 gaagattgca ttctttattg cccacgactt taatgctgtg ttcttttcct 1651 cgtctaggta ctctttatag ctggaattgg gccctggatt gcacaggaag 1701 atagcgggaa tgccaccttt aatttgaacc ggctttccgt acttggtatt 1751 tgattgccag tccctttggg cccccatgaa ttctttaaaa tgttttagat 1801 agtgcggatc gacgtcatca atgacgttgt accaggcatc attattgtat 1851 acctttggac ttaaatcaag atgaccacac aaataattat ggggtcctaa 1901 tgacctggcc cacattgtct tccccgtccg gctatctcct tcgataacta 1951 tacttatcgg tcttaatggc cgcgcagaac tgacaacgtt ctctgcagcc 2001 cactcttcga gttcctccgg aactcgatca aacgaagaag aagaaaaagg 2051 cgaaacataa acctccatcg gaggtgtaaa aatcttatct aaattattat 2101 ttaaattatg atactgtaaa acataatctt taggagcttt ctcccttagt 2151 atactgaggg ccgaagcttt ggaccctgaa ttgattgcct cggcatatgc 2201 gtcgttggca gattggcaac ctcctctagc cgatcttcca tcgatctgga 2251 aaactccatg atcaagcacg tctccgtctt tgtccatgta ggacttgaca 2301 tctgttgagc ttttagctgc ctgaatgttc ggatggaaat gtgctgacct 2351 ggttggggat gtgagatcga agaatctttt gttttggcat ttgtatttgc 2401 cttcaaattg gatgagcaca tgcaggtgag gagacccatc ttcgtgtaac 2451 tctctgcaga ttcttatgaa taatttatta ataggtgttg ctagggctaa 2501 aatttgggaa agtgtttctt ctttggtcag ggagcagtgt ggatatgtga 2551 ggaaataatt ccttgcattt attataaatt tttttggttg aggcatttga 2601 cttggtcaaa cgggtcctct caaacttccc tatgcaatcg gggaatgggt 2651 ccttatttat atgtgaggac ctaaatggca ctattgtaaa tagtttaaag 2701 aaattcaaaa ttcaaaatcc aaaagcggcc atccgtataa tatt