Sequence of DPV Mungbean yellow mosaic India virus
Mungbean yellow mosaic India virus isolate India:Varanasi:French bean:2011 segment DNA-A, complete sequence.
ACC No: KC019304
Dated: 2013-02-19 | Length: 2745 | CRC: -955527975
ID KC019304; SV 1; circular; genomic DNA; STD; VRL; 2745 BP.
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AC KC019304;
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DT 19-FEB-2013 (Rel. 115, Created)
DT 19-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE Mungbean yellow mosaic India virus isolate India:Varanasi:French bean:2011
DE segment DNA-A, complete sequence.
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KW .
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OS Mungbean yellow mosaic India virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2745
RA Bhatt B.S., Singh R.P., Kale R.K., Singh A.K.;
RT "Molecular Characterization of Bean Dwarf Mosaic Virus";
RL Unpublished.
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RN [2]
RP 1-2745
RA Bhatt B.S., Singh R.P., Kale R.K., Singh A.K.;
RT ;
RL Submitted (29-OCT-2012) to the INSDC.
RL School of Life Sciences, Central University of Gujarat, Sector-30,
RL Gandhinagar, Gujarat 382030, India
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1. .2745
FT /organism="Mungbean yellow mosaic India virus"
FT /segment="DNA-A"
FT /host="Phaseolus vulgaris"
FT /isolate="India:Varanasi:French bean:2011"
FT /mol_type="genomic DNA"
FT /country="India"
FT /isolation_source="leaf"
FT /collection_date="2011"
FT /clone="22"
FT /db_xref="taxon:223287"
FT gene 156. .497
FT /gene="AV2"
FT CDS 156. .497
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="AGF33897.1"
FT /translation="MWDPLLNDFPESLHGFRCMLAIKYLQQVQENYPSNSLGFLYLTGL
FT IQVLRIRNHAQADLRYGLLYPDIECTEKIKLRYPARAACVCGRCPYQHEEKTLDQPPHV
FT EETSVLPTV"
FT gene 316. .1089
FT /gene="AV1"
FT CDS 316. .1089
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /note="role in encapsidation of virus particles"
FT /protein_id="AGF33898.1"
FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLVLPASVGGVPTNMKRRRW
FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQKHDIAHTGKVICISDVTRGNGITH
FT RIGKRFCIKAVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE
FT PSTATVKNDLRDRYQVLRKFSATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN"
FT gene complement(1086. .1490)
FT /gene="AC3"
FT CDS complement(1086. .1490)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /note="REn"
FT /protein_id="AGF33899.1"
FT /translation="MDFRTGEYITAAQLKSGVYIWEVQNPLSFKIMHHSPILAGSRMMM
FT TELRIMFNHGLKKALGMHKCFLDLKLYHYLTATSGMILSIFRRQLFKFLNNLGVISLAN
FT ILYFATDFLYVKLHLVEDVNFTHNVQYKLY"
FT gene complement(1228. .1680)
FT /gene="AC2"
FT CDS complement(1228. .1680)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /note="TrAP"
FT /protein_id="AGF33900.1"
FT /translation="MKRTMLRLNSGLQRMRNSTPSKNHCSPPSIKVQHRVAKKRAIRRS
FT RIDLTCGCSYYIHINCRNYGFSHRGVHHCSSTQEWRLYLGGAKSPLFQDHAPQSNSSRV
FT QNDDDRAAHNVQPRVEESTGDAQVLPGLEALPLFDGDFWDDLIDLP"
FT gene complement(1538. .2626)
FT /gene="AC1"
FT CDS complement(1538. .2626)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication initiator protein"
FT /note="Rep"
FT /protein_id="AGF33901.1"
FT /translation="MPREGRFAINARNYFLTYPRCPLTKEDALEQLLALSTPVNKKFIR
FT ICRELHEDGQPHLHVLLQFEGKQQTRNQRFFDLYSRCRSTHYHPNIQAAKSCSDVKTYM
FT EKDGDILDHGTFQIDGRSARGGKQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH
FT NLNCNLSRIFTEPIQAYKSPFTLESFNKVPSYISSWAERNVRDPAARPDRPISIVIEGD
FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL
FT FSTVNQGSTQGRQEESNSTISN"
FT gene complement(2176. .2475)
FT /gene="AC4"
FT CDS complement(2176. .2475)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AGF33902.1"
FT /translation="MKMDNLISMFCFSSKGSNKRGTKGSSTSIPDAGQHITIRTFRQLR
FT AAQMLKHTWRKTETFLIMEPSKSMADQLEEVNNLPTTHTPRHSTLDQSWRPSLY"
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SQ Sequence 2745 BP; 732 A; 575 C; 612 G; 826 T; 0 other;
kc019304 Length: 2745 19-FEB-2013 Type: N Check: 5269 ..
1 acctgagtgc cccgcgaccg gtgtattggg gttactttaa cttttttgct
51 tttgtggtac ccttatcttt agtcgttcaa tcagaagcgc tcctcagcgc
101 tatgttaatt caaatttgaa ttataaagca agtggacact ctgaacccac
151 taacaatgtg ggatccattg ttgaacgact ttcccgaatc actgcatgga
201 ttccggtgca tgttggcaat aaagtatttg cagcaagttc aagagaatta
251 tccatctaat tctcttggtt ttttgtacct tacagggtta attcaggtat
301 tgcgcatccg gaatcatgcc caagcggacc tacgatacgg ccttctctac
351 cccgatatcg aatgcacgga gaagattaaa cttcgatacc ccgctcgtgc
401 tgcctgcgtc tgtgggaggt gtccctacca acatgaagag aagacgttgg
451 accaaccgcc ccatgtggag gaaacctcgg ttttaccgac tgtataggtc
501 ccctgatgtc cctcgtggtt gtgagggacc atgtaaagtt caatcatttg
551 agcaaaagca tgatattgcc cacacaggca aagtgatttg catatctgac
601 gtgactagag gtaatggaat tacacatcgt attggcaaac gattttgcat
651 caaggccgtg tacattactg gtaaggtttg gatggacgaa aatattaagt
701 ctaaaaatca cacgaacact gtgatgttca agttatgtcg tgacagacga
751 ccttttggta cacccatgga ttttggtcaa gtgttcaaca tgtatgacaa
801 tgagcccagt acagctactg tgaagaacga tctgcgtgat cgttatcaag
851 tcttgcgaaa gtttagtgcc actgttactg gtggccaata tgcttgtaag
901 gaacaagcca tggtgaatcg ttttttcaaa gttaataatt atgttgttta
951 caaccaccag gaggcagcga agtatgagaa ccatactgag aacgcattat
1001 tattgtatat ggcatgtact catgcctcaa atcctgtgta tgcaacactt
1051 aaaattcgga tctattttta tgattcgata ttgaattaat aaagtttgta
1101 ttgaacatta tgcgtaaagt ttacatcctc caccaaatgg agttttacat
1151 acaggaaatc cgtcgcgaaa tataaaatat ttgctaagct aatgactcct
1201 aaattattta gaaacttaaa taattgtcta cggaagatcg ataagatcat
1251 cccagaagtc gccgtcaaat aatggtagag cttcaagtcc aggaagcact
1301 tgtgcatccc cagtgctttc ttcaacccgt ggttgaacat tatgcgcagc
1351 tcggtcatca tcattctgga ccctgctaga attggactgt ggtgcatgat
1401 cttgaaagag aggggatttt gcacctccca gatatagacg ccactcttga
1451 gttgagctgc agtgatgtac tcccctgtgc gaaaatccat agttgcggca
1501 gttgatgtgg atgtaatagc tacacccaca ggttagatca attcgagatc
1551 gtcgaattgc tctcttcttg gcgaccctgt gttgaacctt gattgacggt
1601 ggagaacagt ggttctttga gggtgtagaa ttccgcattc tttgaagccc
1651 actgtttaag cgcagcattg ttctcttcat ccaagtactc tttataggac
1701 gacttgggac cagggttaca cagaaagatg gtggggatac cacctttaat
1751 tttagtgggc ttcccgtact tgacgttaga ctgccagtct ctttgcgcgc
1801 ccatgaattc tttgaaatgt ttcaaataat gtggatcaac gtcatcgatg
1851 acgttgtacc atgcctcgtt agagtatgtt ttgtcgttta gatccaaatg
1901 gccgcaaaga taattatgag gacctatggc acgtgcccac atggttttac
1951 ccgtgcgact atctccttca ataacaatac taataggtct atctggccgc
2001 gcagcgggat ctctcacatt tctttcagcc catgaagaaa tgtagctggg
2051 aaccttgttg aatgattcta atgtaaaagg cgacttatat gcctgaatag
2101 gctctgtgaa tatccgagac aaattacaat ttaagttatg aaattgtaaa
2151 ataaaatcct tgggagcctt ttcttttaat ataaggaggg cctccaactt
2201 tgatccagag ttgagtgcct cggcgtatgc gtcgttggca gattgtttac
2251 ctcctctagc tgatctgcca tcgatttgga aggttccatg atcaagaatg
2301 tctccgtctt tctccatgta tgttttaaca tctgagcagc tcttagctgc
2351 ctgaatgttc ggatggtaat gtgttgaccg gcatctggaa tagaggtcga
2401 agaacctttg gttcctcgtt tgttgcttcc cttcgaactg aagcagaaca
2451 tggagatgag gttgtccatc ttcatggagt tcacgacaga tgcggatgaa
2501 cttcttgtta accggtgttg acaacgcgag aagttgttca agagcgtcct
2551 cctttgtaag aggacatctg ggatatgtca agaaatagtt tcttgcgttt
2601 atagcaaaac gaccttccct tggcatattt gaagtcgttt tgtatcggtg
2651 tacaccgatt acttctctat ccccctatcg gtgtatcggt gtactatata
2701 tactagagct actaaaagcc cataggggca ctcagctata atatt