Sequence of DPV Okra leaf curl betasatellite
Okra enation leaf curl betasatellite isolate India:Gandhinagar:2012, complete sequence.
ACC No: KC019310
Dated: 2013-02-19 | Length: 1359 | CRC: 897639273
ID KC019310; SV 1; circular; genomic DNA; STD; VRL; 1359 BP.
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AC KC019310;
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DT 19-FEB-2013 (Rel. 115, Created)
DT 19-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE Okra enation leaf curl betasatellite isolate India:Gandhinagar:2012,
DE complete sequence.
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KW .
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OS Okra enation leaf curl betasatellite
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Single stranded DNA satellites; Betasatellites.
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RN [1]
RP 1-1359
RA Bhatt B.S., Yadav B.K., Sangeeta R., Singh R.P., Kale R.K., Singh A.K.;
RT "Molecular Characterization of Okra leaf curl virus";
RL Unpublished.
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RN [2]
RP 1-1359
RA Bhatt B.S., Yadav B.K., Sangeeta R., Singh R.P., Kale R.K., Singh A.K.;
RT ;
RL Submitted (29-OCT-2012) to the INSDC.
RL School of Life Sciences, Central University of Gujarat, Sector-30,
RL Gandhinagar, Gujarat 382030, India
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1. .1359
FT /organism="Okra enation leaf curl betasatellite"
FT /host="Abelmoschus esculentus"
FT /isolate="India:Gandhinagar:2012"
FT /mol_type="genomic DNA"
FT /country="India"
FT /isolation_source="leaf"
FT /collection_date="28-Jun-2012"
FT /identified_by="A K Singh"
FT /clone="20"
FT /db_xref="taxon:908276"
FT gene complement(192. .548)
FT /gene="C1"
FT CDS complement(192. .548)
FT /codon_start=1
FT /gene="C1"
FT /product="C1 protein"
FT /note="suppressor of RNAi; pathogenecity factor; beta C1"
FT /protein_id="AGF33925.1"
FT /translation="MTRFSKNREGIVFKVDVRLMQQQRISVHMQISSTRSPAISTRTFI
FT IDYTYQELHIPFDFNGLEGTITSTFKFHYWGSKAEEILDEDIIHMVDIIIIENPDIMGM
FT DVNEPVTIDNKIII"
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SQ Sequence 1359 BP; 444 A; 209 C; 286 G; 420 T; 0 other;
kc019310 Length: 1359 19-FEB-2013 Type: N Check: 6155 ..
1 accgtgggcg agcggaacct gagacgttgt gggacccact aatgaatgaa
51 gttcatgggt gatttgaata agatggagga aattgtggat gagaaaagga
101 atcaagtttt ggttttgcaa cagattttgg ttcagttcat ctgccagctc
151 tgcttgcaca gcaattgtct tctctcctcg tcttttaaaa actaaattat
201 tattttatta tcaatagtta ctggttcgtt tacatccatt cccatgatat
251 ctgggttttc aataataata atatccacca tatgtatgat gtcttcgtcg
301 agtatttctt ctgcttttga accccagtaa tgaaacttga aggttgatgt
351 gatcgttcct tctaaaccgt tgaagtcgaa tggaatgtgt aattcttggt
401 atgtgtagtc gatgatgaat gttcttgttg aaatggctgg agatcttgtt
451 gaactgatct gcatatggac tgatatcctt tgttgttgca tgagcctgac
501 atctactttg aagacgatcc cttccctgtt tttgctgaac ctcgtcatct
551 tgaatgtgcg tttaatgtat atgtttcaaa tgaatatata gatgaaatgt
601 atagatattt tcacataatg tgtggatatc attttaaatg atatatgtgg
651 ttcttgtttg tttgcacata atatctggta taatgtataa taaggtagta
701 tatatgtatt gagtagttgt atgtataaat tgaagaaata gaaatactgt
751 gttacagata tacgggtata tttttaggat aagaaaaaga aaagaggaaa
801 tagaggaaaa atgaaaccag aaagaaagga aatatatata aactaaaaaa
851 agaaaaggga gcgcagcgat aaaaaaaaat aatcggaaaa gaaaaaaata
901 agaaaatcaa ataaagaaaa ttcacaaaga aaaataaaga ataaaagatc
951 cgtggtcaaa acgaagccgt tttgatgagg aaaaggaaag aaaacggtca
1001 atttatattt tttaccagtt accgcacagt aaatggtaaa tagtaaatga
1051 gtgggtaaaa tatagagaca ccgataggta aatgagacac cgatatatcg
1101 gttctcaatt ggtacctctg gagtcttagg aagtgcttgt ttaccaattt
1151 gcccctactt ttaagttata ctgcgcgtcg tagtgcgctt aaaaagttat
1201 cgtctctctc ttcacttccg ataaaaacct aatttcccgg tgatcggagt
1251 cgaattttcc gacacgcgcg gcggtgtgta cccctgggag ggtagaaacc
1301 actacgctac gcagcagcct tagctacgcc ggagcttagc tcgcccacgt
1351 tctaatatt