Sequence of DPV Tomato leaf deformation virus
Tomato leaf deformation virus isolate P111:2009 C1 (C1) gene, partial cds; and C4 (C4) gene, complete cds.
ACC No: KC237083
Dated: 2013-05-14 | Length: 921 | CRC: -1708888953
ID KC237083; SV 1; linear; genomic DNA; STD; VRL; 921 BP. XX AC KC237083; XX DT 14-MAY-2013 (Rel. 116, Created) DT 14-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato leaf deformation virus isolate P111:2009 C1 (C1) gene, partial cds; DE and C4 (C4) gene, complete cds. XX KW . XX OS Tomato leaf deformation virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-921 RX PUBMED; 23415858. RA Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B., RA Aragon-Caballero L., Navas-Castillo J., Moriones E.; RT "Fulfilling Koch's postulates confirms the monopartite nature of tomato RT leaf deformation virus: A begomovirus native to the New World"; RL Virus Res. 173(2):286-293(2013). XX RN [2] RP 1-921 RA Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B., RA Aragon-Caballero L., Navas-Castillo J., Moriones E.; RT ; RL Submitted (27-NOV-2012) to the INSDC. RL Fruticultura Subtropical / Fitopatologia, IHSM La Mayora (IHSM-UMA-CSIC), RL Camino de La Mayora, Algarrobo-Costa, Malaga 29750, Spain XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .921 FT /organism="Tomato leaf deformation virus" FT /host="Solanum lycopersicum" FT /isolate="P111:2009" FT /mol_type="genomic DNA" FT /country="Peru:La Libertad, Paijan" FT /collected_by="E. Moriones" FT /collection_date="2009" FT /db_xref="taxon:681518" FT gene complement(<1. .614) FT /gene="C1" FT CDS complement(<1. .614) FT /codon_start=1 FT /gene="C1" FT /product="C1" FT /note="Rep" FT /protein_id="AGL34888.1" FT /translation="MPPPKAFKINAKNYFLTYPHCSLTKEEALSQLQNLETPTNKKYIK FT IARELHENGQHHLHVLLQFQGKFQCKNNRFFDLVSPTRSTHFHPNVQGAKSSTDVNAYV FT DKDGDTLEWGEFQVDGRSARGGSQTANDAAAEALNSGSKEAALQIIREKLPEKYLFQFH FT NLNCNLDKIFSKAPEPWSPPFPLSSFTNVPEEMQEWADDYFG" FT gene complement(200. .457) FT /gene="C4" FT CDS complement(200. .457) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /protein_id="AGL34889.1" FT /translation="MGNIISTCYSSSKANSNVKITDSSTWYPQPGQHISIRTFRELNPA FT PTSTPTSTRTEIHLNGENSKSTAEVLEEAAKLLTTLPQKP" XX SQ Sequence 921 BP; 233 A; 173 C; 209 G; 306 T; 0 other; kc237083 Length: 921 14-MAY-2013 Type: N Check: 1064 .. 1 ccaaaataat catcagccca ttcttgcatc tcctccggga cgttagtgaa 51 ggaggagagt ggaaacggag gagaccatgg ctctggagcc ttcgaaaaaa 101 ttttatctaa attacaattt aaattatgaa attgaaataa atatttttca 151 gggagtttct cccttattat ttggagggct gcctctttgc taccgctatt 201 taaggcttct gcggcagcgt cgttagcagt ttggctgcct cctctagcac 251 ttctgccgtc gacttggaat tctccccatt caagtgtatc tccgtccttg 301 tcgacgtagg cgttgacgtc ggtgctggat ttagctccct gaacgttcgg 351 atggaaatgt gttgacctgg ttggggatac caggtcgaag aatctgttat 401 ttttacattg gaatttgcct tggaactgga gtagcacgtg gagatgatgt 451 tgcccatttt cgtgaagttc ccttgcaatt ttgatatatt tcttatttgt 501 gggtgtctct agattttgca attgggaaag tgcttcttct ttggttaaac 551 tgcagtgggg atatgtaaga aaataatttt ttgcatttat cttaaaggcc 601 ttaggtgggg gcattttggt aataaatatt ttggacaccg attggtttgg 651 cttctaaaac ttatagcaat cggtgtactg gagtcttatt tatagtagga 701 gttcctaaag gatctagcaa cacgtggcgg ccatccgtat aatattaccg 751 gatggccgcg cgattttttt acccccttgt taagtttggg accacacata 801 tacggacaaa accttttgtc caatcataga gtgtctgacg agcttaatta 851 ttaaattcct ttagactgag tggtctataa agacccagac aaactgtaat 901 aattgatatc tttaactcaa a