Sequence of DPV Tomato leaf deformation virus
Tomato leaf deformation virus isolate P182:2009 C1 (C1) gene, partial cds; and C4 (C4) gene, complete cds.
ACC No: KC237102
Dated: 2013-05-14 | Length: 920 | CRC: 1289078796
ID KC237102; SV 1; linear; genomic DNA; STD; VRL; 920 BP. XX AC KC237102; XX DT 14-MAY-2013 (Rel. 116, Created) DT 14-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato leaf deformation virus isolate P182:2009 C1 (C1) gene, partial cds; DE and C4 (C4) gene, complete cds. XX KW . XX OS Tomato leaf deformation virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-920 RX PUBMED; 23415858. RA Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B., RA Aragon-Caballero L., Navas-Castillo J., Moriones E.; RT "Fulfilling Koch's postulates confirms the monopartite nature of tomato RT leaf deformation virus: A begomovirus native to the New World"; RL Virus Res. 173(2):286-293(2013). XX RN [2] RP 1-920 RA Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B., RA Aragon-Caballero L., Navas-Castillo J., Moriones E.; RT ; RL Submitted (27-NOV-2012) to the INSDC. RL Fruticultura Subtropical / Fitopatologia, IHSM La Mayora (IHSM-UMA-CSIC), RL Camino de La Mayora, Algarrobo-Costa, Malaga 29750, Spain XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .920 FT /organism="Tomato leaf deformation virus" FT /host="Solanum pennellii" FT /isolate="P182:2009" FT /mol_type="genomic DNA" FT /country="Peru:Arequipa, Aplao" FT /collected_by="E. Moriones" FT /collection_date="2009" FT /db_xref="taxon:681518" FT gene complement(<1. .614) FT /gene="C1" FT CDS complement(<1. .614) FT /codon_start=1 FT /gene="C1" FT /product="C1" FT /note="Rep" FT /protein_id="AGL34926.1" FT /translation="MPLPKRFKISAKNYFLTYPQCNLTKEEALSQLQNLQTPTNKKYIK FT IARELHENGQHHLHVLLQFQGKFQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVNSYV FT DKDGDTLQWGEFQVDGRSARGGCQTANDAAAEALNAETKEAALQIIREKLPEKYLFQFH FT NLNSNLDKIFTKAPEPWVPPFPLSSFTNVPEEMQEWADDYFG" FT gene complement(200. .457) FT /gene="C4" FT CDS complement(200. .457) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /protein_id="AGL34927.1" FT /translation="MGNIISTCYSSSKGNSSARITDSSTWYPQPGQHISIRTFRELNPA FT PTSTPTSTRTETLYSGENSRLTDEVLGEVAKQLTTLPQKP" XX SQ Sequence 920 BP; 231 A; 177 C; 217 G; 295 T; 0 other; kc237102 Length: 920 14-MAY-2013 Type: N Check: 2854 .. 1 ccaaagtaat catcagccca ttcctgcatc tcctccggga cgttggtgaa 51 tgaggagagt ggaaacggag gaacccaagg ttccggagcc tttgtaaaaa 101 ttttatctaa attagaattt agattatgaa attgaaataa atatttttca 151 gggagttttt ccctgataat ttgtaaggct gcctctttgg tttcagcgtt 201 tagggcttct gcggcagcgt cgttagctgt ttggcaacct cccctagcac 251 ttcgtccgtc aacctggaat tctccccact gtaaagtgtc tccgtccttg 301 tcgacgtagg agttgacgtc ggagctggat ttagctccct gaatgttcgg 351 atggaaatgt gctgacctgg ttggggatac caggtcgaag aatcggttat 401 tcgtgcactg gaatttccct tggaactgga gtagcacgtg gagatgatgt 451 tgcccattct cgtgaagctc cctggcgatt ttgatgtatt tcttatttgt 501 gggtgtttgt aggttttgca attgggaaag tgcttcttct ttggttaaat 551 tgcactgggg atatgtcaag aaataatttt ttgcacttat tttaaaacgc 601 ttaggcagtg gcatttttgt aatatatgcc ttgtacccca aatggtttgg 651 cttgaaaact tatatgaatt ggggtaaagg ggtacaatat atagtaggag 701 ttcctaaagg atctagcaac acgtggaggc catccgttat aatattaccg 751 gatggccgcg cgattttttt acccccctgt taagtttggg accacaccta 801 tacggacaaa accttttgtc caatcatgga gcgtctgacg agcttaatta 851 tttattcctt tagactgagt ggtctataaa gacccagaca aactgtaata 901 attgatatct ttaactcaaa