Sequence of DPV Apple chlorotic leaf spot virus

Apple chlorotic leaf spot virus isolate LN-2-2-2 coat protein gene, complete cds.

ACC No: KC404882

Dated: 2013-05-06 | Length: 582 | CRC: -342311436

                
ID   KC404882; SV 1; linear; genomic RNA; STD; VRL; 582 BP.
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AC   KC404882;
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DT   06-MAY-2013 (Rel. 116, Created)
DT   06-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Apple chlorotic leaf spot virus isolate LN-2-2-2 coat protein gene,
DE   complete cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Trichovirus.
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RN   [1]
RP   1-582
RA   Chen S., Zhou Y., Ye T., Hao L., Zhou T.;
RT   "Sequence diversity and potential recombination events in the coat protein
RT   gene of Apple chlorotic leaf spot virus in China";
RL   Unpublished.
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RN   [2]
RP   1-582
RA   Chen S., Zhou Y., Ye T., Hao L., Zhou T.;
RT   ;
RL   Submitted (20-DEC-2012) to the INSDC.
RL   State Key Laboratory for Agrobiotechnology, China Agricultural University,
RL   No. 2, Yuanmingyuan West Road, Beijing 100193, China
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNAMAN v. 5.2.2
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .582
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /host="apple"
FT                   /isolate="LN-2-2-2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Sep-2010"
FT                   /db_xref="taxon:12175"
FT   CDS             1. .582
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AGK64033.1"
FT                   /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQILESIFANI
FT                   AIQGTSEQTEFLDLVVEVKSMEDQKVIGAYNLKEVVNMIKAFKTTSSDPNISNMTFRQV
FT                   CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI
FT                   TNMNRRLLQTEFAKSENEAKLSSVTTDLCI"
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SQ   Sequence 582 BP; 184 A; 120 C; 145 G; 133 T; 0 other;

kc404882 Length: 582  06-MAY-2013  Type: N  Check: 2235  ..

       1  atggcagcag ttctgaattt acagctaaaa gtggacgcag atctgaaagc
      51  attcctggcc gcagaaggca gaccccttca tggaaagaca ggggcaatcc
     101  tggaacagat actggagtcc atcttcgcga acatagcgat tcagggaacg
     151  tcagagcaga cagaattcct ggacctagtg gtggaagtga agtcaatgga
     201  ggatcaaaag gtgatcgggg cctacaacct gaaggaggtg gtcaatatga
     251  tcaaagcctt caagactacc tcttcggatc cgaacatcag caacatgact
     301  ttccgccagg tgtgtgaggc tttcgcaccg gaggcgagaa acgggttggt
     351  aaaattgaag tataaagggg ttttcactaa cctctttaca accatgccgg
     401  aagtaggaag taagtaccca gagctaatgt ttgatttcaa taagggcctt
     451  aacatgttca tcatgaataa ggctcaacaa aaagtcataa ccaatatgaa
     501  ccggcgtctt ttacaaactg aatttgcaaa aagtgagaat gaggcgaagc
     551  tctcatctgt tacaactgat ctttgcattt ag