Sequence of DPV Apple chlorotic leaf spot virus
Apple chlorotic leaf spot virus isolate LN-2-2-2 coat protein gene, complete cds.
ACC No: KC404882
Dated: 2013-05-06 | Length: 582 | CRC: -342311436
ID KC404882; SV 1; linear; genomic RNA; STD; VRL; 582 BP. XX AC KC404882; XX DT 06-MAY-2013 (Rel. 116, Created) DT 06-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Apple chlorotic leaf spot virus isolate LN-2-2-2 coat protein gene, DE complete cds. XX KW . XX OS Apple chlorotic leaf spot virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales; OC Betaflexiviridae; Trichovirus. XX RN [1] RP 1-582 RA Chen S., Zhou Y., Ye T., Hao L., Zhou T.; RT "Sequence diversity and potential recombination events in the coat protein RT gene of Apple chlorotic leaf spot virus in China"; RL Unpublished. XX RN [2] RP 1-582 RA Chen S., Zhou Y., Ye T., Hao L., Zhou T.; RT ; RL Submitted (20-DEC-2012) to the INSDC. RL State Key Laboratory for Agrobiotechnology, China Agricultural University, RL No. 2, Yuanmingyuan West Road, Beijing 100193, China XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 5.2.2 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .582 FT /organism="Apple chlorotic leaf spot virus" FT /host="apple" FT /isolate="LN-2-2-2" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Sep-2010" FT /db_xref="taxon:12175" FT CDS 1. .582 FT /codon_start=1 FT /product="coat protein" FT /protein_id="AGK64033.1" FT /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQILESIFANI FT AIQGTSEQTEFLDLVVEVKSMEDQKVIGAYNLKEVVNMIKAFKTTSSDPNISNMTFRQV FT CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI FT TNMNRRLLQTEFAKSENEAKLSSVTTDLCI" XX SQ Sequence 582 BP; 184 A; 120 C; 145 G; 133 T; 0 other; kc404882 Length: 582 06-MAY-2013 Type: N Check: 2235 .. 1 atggcagcag ttctgaattt acagctaaaa gtggacgcag atctgaaagc 51 attcctggcc gcagaaggca gaccccttca tggaaagaca ggggcaatcc 101 tggaacagat actggagtcc atcttcgcga acatagcgat tcagggaacg 151 tcagagcaga cagaattcct ggacctagtg gtggaagtga agtcaatgga 201 ggatcaaaag gtgatcgggg cctacaacct gaaggaggtg gtcaatatga 251 tcaaagcctt caagactacc tcttcggatc cgaacatcag caacatgact 301 ttccgccagg tgtgtgaggc tttcgcaccg gaggcgagaa acgggttggt 351 aaaattgaag tataaagggg ttttcactaa cctctttaca accatgccgg 401 aagtaggaag taagtaccca gagctaatgt ttgatttcaa taagggcctt 451 aacatgttca tcatgaataa ggctcaacaa aaagtcataa ccaatatgaa 501 ccggcgtctt ttacaaactg aatttgcaaa aagtgagaat gaggcgaagc 551 tctcatctgt tacaactgat ctttgcattt ag