Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus isolate KSQ1-3, complete genome.
ACC No: KC428753
Dated: 2013-04-03 | Length: 2781 | CRC: 1779990655
ID KC428753; SV 1; linear; genomic DNA; STD; VRL; 2781 BP. XX AC KC428753; XX DT 03-APR-2013 (Rel. 116, Created) DT 03-APR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate KSQ1-3, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Wang X.G., Du Y.J., Huang J.F.; RT "Genomic characterization of Tomato yellow leaf curl virus infecting RT brinjaul in Xinjiang"; RL Unpublished. XX RN [2] RP 1-2781 RA Wang X.G., Du Y.J., Huang J.F.; RT ; RL Submitted (31-DEC-2012) to the INSDC. RL College of Agriculture, Shi Hezi University, Xinjiang Shihezi City North RL Four Road, Shi Hezi, Xin Jiang 832000, China XX FH Key Location/Qualifiers FH FT source 1. .2781 FT /organism="Tomato yellow leaf curl virus" FT /host="brinjaul" FT /isolate="KSQ1-3" FT /mol_type="genomic DNA" FT /country="China:Kashi, Xinjiang" FT /collected_by="Du Yejuan" FT /collection_date="23-Jan-2012" FT /db_xref="taxon:10832" FT gene 314. .664 FT /gene="AV2" FT CDS 314. .664 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /protein_id="AGI37677.1" FT /translation="MWDPLLNEFPESVHGFRCVLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 474. .1250 FT /gene="AV1" FT CDS 474. .1250 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /protein_id="AGI37678.1" FT /translation="MSKRPGDIIISTPVSKVRRKLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIRHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDMFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1247. .1651) FT /gene="AC3" FT CDS complement(1247. .1651) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /protein_id="AGI37679.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKILGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDTLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1392. .1799) FT /gene="AC2" FT CDS complement(1392. .1799) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /protein_id="AGI37680.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEDIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1708. .2781) FT /gene="AC1" FT CDS complement(1708. .2781) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /protein_id="AGI37681.1" FT /translation="MPRLFTIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLDVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFITLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2337. .2630) FT /gene="AC4" FT CDS complement(2337. .2630) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /protein_id="AGI37682.1" FT /translation="MGNHISMCLSNSKESTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 755 A; 530 C; 612 G; 884 T; 0 other; kc428753 Length: 2781 03-APR-2013 Type: N Check: 9363 .. 1 gttgaaatga attggtgtcc ctcaaagctc tatggcaatc ggtgtatcgg 51 tgtcttactt atacctggac acctaatggc tatttggtaa ttttgtaaaa 101 gtacattgca atacaaaatt caaaattcaa aaatcaaatc attaaagcgg 151 ccatccgtat aatattaccg gatggccgcg ccttttcttt ttatgtggtc 201 cccacgaggg ttccacagac gtcactgtca accaatcaaa ttccatcctc 251 aaacgttaga taagtgttca tttgtcttta tatacttggt ccccaagtag 301 tttgtcttgc actatgtggg atccacttct aaatgaattt cctgaatctg 351 ttcacggatt tcgttgtgtg ttagctatta aatatttgca gtccgttgag 401 gaaacttatg agcccaatac attgggccac gatttaatta gggatcttat 451 atctgttgta agggcccgtg actatgtcga agcgaccagg cgatataatc 501 atttccacgc ccgtctcgaa ggttcgccga aagctgaact tcgacagccc 551 atacagcagc cgtgctgctg tccccattgt ccaaggcaca aacaagcgac 601 gatcatggac gtacaggccc atgtaccgga agcccagaat atacagaatg 651 tatcgaagcc ctgatgttcc tcgtggatgt gaaggcccat gtaaagtcca 701 gtcttatgag caacgggatg atattaggca tactggtatt gttcgttgtg 751 ttagtgatgt tactcgtgga tctggaatta ctcacagagt gggtaagagg 801 ttttgtgtta aatcgatata ttttttaggt aaagtctgga tggatgaaaa 851 tatcaagaag cagaatcaca ctaatcaggt catgttcttc ttggttcgtg 901 atagaaggcc ctatggaaac agcccaatgg attttggaca ggtttttaat 951 atgttcgata atgagcccag taccgcaact gtgaagaatg atttgcggga 1001 tatgtttcaa gtgatgagga aatttcatgc tacagttatt ggtgggccct 1051 ctggaatgaa ggaacaggca ttagttaaga gattttttag aattaacagt 1101 catgtaactt ataatcatca ggaggcagcc aagtacgaga accatactga 1151 aaacgccttg ttattgtata tggcatgtac gcatgcctct aatccagtgt 1201 atgcaactat gaaaatacgc atctatttct atgattcaat atcaaattaa 1251 taaaatttat attttatatc atgagtttct gttacattta ttgtgttttc 1301 aagtacatca tacaatacat gatcaactgc tctgattaca ttgttaattg 1351 aaattacacc aagagtatct aaatacttaa gaacttgata tctaaatact 1401 cttaagaaac gaccagtctg aggctgtaat gtcgtccaaa ttcggaagtt 1451 gagaaaacat ttgtgaatcc ccaatatctt cctgatgttg tggttgaatc 1501 ttatctgaat ggaaatgatg tcgtggttca ttagaaatgg cctctggctg 1551 tgttctgtta tcttgaaata gaggggattg tttatctccc agataaaaac 1601 gccattctct gcttgaggag cagtgatgag ttcccctgtg cgtgaatcca 1651 tgattgttgc agttgatgtg gaggtagtat gagcagccac agtctaggtc 1701 tacacgctta cgccttattg gtttcttctt ggctatcttg tgttggacct 1751 tgattgatac ttgcgaacag tggctcgtag agggtgatga aggttgcatt 1801 cttgagagcc caatttttca aggatatgtt tttttcttcg tctagatatt 1851 ccctatatga ggaggtaggt cctggattgc agaggaagat agtgggaatt 1901 ccccctttaa tttgaatggg cttcccgtac tttgtgttgc tttgccagtc 1951 cctctgggcc cccatgaatt ccttgaagtg ctttaaataa tgcgggtcta 2001 cgtcatcaat gacgttgtac cacgcatcat tactgtacac ctttgggctt 2051 aggtctagat gtccacataa ataattatgt gggcctagag acctggccca 2101 cattgtcttg cctgttctgc tatcaccctc aatgacaata cttatgggtc 2151 tccatggccg cgcagcggaa gatacgacgt tctcggcgac ccactcttca 2201 agttcatctg gaacttgatt aaaagaagaa gaaagaaatg gagaaacata 2251 aacgtctaaa ggaggactaa aaatcctatc taaatttgaa cttaaattat 2301 gaaattgtaa aatatagtcc tttggggcct tctcttttaa tatattgagg 2351 gcctcggatt tactgcctga attgagtgcc tcggcatatg cgtcgttggc 2401 agattgctga cctcctctag ctgatctgcc atcgatttgg aaaactccaa 2451 aatcaatgaa gtctccgtct ttctccacgt aggtcttgac atctgttgag 2501 ctcttagctg cctgaatgtt cggatggaaa tgtgctgacc tgtttgggga 2551 taccaggtcg aagaaccgtt ggttcttaca ttggtacttt ccttcgaatt 2601 ggataagcac atggagatgt ggttccccat tctcgtggag ttctctgcaa 2651 actttgatgt attttttatt tgttggggtt tctaggtttt ttaattggga 2701 aagtgcttcc tctttagaga gagaacaatt gggatatgtt aggaaataat 2751 ttttggcata tattgtaaat aaacgaggca t