Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus isolate KSQ1-3, complete genome.
ACC No: KC428753
Dated: 2013-04-03 | Length: 2781 | CRC: 1779990655
ID KC428753; SV 1; linear; genomic DNA; STD; VRL; 2781 BP.
XX
AC KC428753;
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DT 03-APR-2013 (Rel. 116, Created)
DT 03-APR-2013 (Rel. 116, Last updated, Version 1)
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DE Tomato yellow leaf curl virus isolate KSQ1-3, complete genome.
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KW .
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OS Tomato yellow leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2781
RA Wang X.G., Du Y.J., Huang J.F.;
RT "Genomic characterization of Tomato yellow leaf curl virus infecting
RT brinjaul in Xinjiang";
RL Unpublished.
XX
RN [2]
RP 1-2781
RA Wang X.G., Du Y.J., Huang J.F.;
RT ;
RL Submitted (31-DEC-2012) to the INSDC.
RL College of Agriculture, Shi Hezi University, Xinjiang Shihezi City North
RL Four Road, Shi Hezi, Xin Jiang 832000, China
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FH Key Location/Qualifiers
FH
FT source 1. .2781
FT /organism="Tomato yellow leaf curl virus"
FT /host="brinjaul"
FT /isolate="KSQ1-3"
FT /mol_type="genomic DNA"
FT /country="China:Kashi, Xinjiang"
FT /collected_by="Du Yejuan"
FT /collection_date="23-Jan-2012"
FT /db_xref="taxon:10832"
FT gene 314. .664
FT /gene="AV2"
FT CDS 314. .664
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="AGI37677.1"
FT /translation="MWDPLLNEFPESVHGFRCVLAIKYLQSVEETYEPNTLGHDLIRDL
FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV
FT PEAQNIQNVSKP"
FT gene 474. .1250
FT /gene="AV1"
FT CDS 474. .1250
FT /codon_start=1
FT /gene="AV1"
FT /product="AV1 protein"
FT /protein_id="AGI37678.1"
FT /translation="MSKRPGDIIISTPVSKVRRKLNFDSPYSSRAAVPIVQGTNKRRSW
FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIRHTGIVRCVSDVTRGSGITH
FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN
FT EPSTATVKNDLRDMFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE
FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN"
FT gene complement(1247. .1651)
FT /gene="AC3"
FT CDS complement(1247. .1651)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="AGI37679.1"
FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI
FT ISIQIRFNHNIRKILGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDTLGVISINN
FT VIRAVDHVLYDVLENTINVTETHDIKYKFY"
FT gene complement(1392. .1799)
FT /gene="AC2"
FT CDS complement(1392. .1799)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="AGI37680.1"
FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI
FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ
FT HQEDIGDSQMFSQLPNLDDITASDWSFLKSI"
FT gene complement(1708. .2781)
FT /gene="AC1"
FT CDS complement(1708. .2781)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /protein_id="AGI37681.1"
FT /translation="MPRLFTIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC
FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK
FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL
FT SSNLDRIFSPPLDVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR
FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS
FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFITLYEPLFA
FT SINQGPTQDSQEETNKA"
FT gene complement(2337. .2630)
FT /gene="AC4"
FT CDS complement(2337. .2630)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AGI37682.1"
FT /translation="MGNHISMCLSNSKESTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ
FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPRHSIQAVNPRPSIY"
XX
SQ Sequence 2781 BP; 755 A; 530 C; 612 G; 884 T; 0 other;
kc428753 Length: 2781 03-APR-2013 Type: N Check: 9363 ..
1 gttgaaatga attggtgtcc ctcaaagctc tatggcaatc ggtgtatcgg
51 tgtcttactt atacctggac acctaatggc tatttggtaa ttttgtaaaa
101 gtacattgca atacaaaatt caaaattcaa aaatcaaatc attaaagcgg
151 ccatccgtat aatattaccg gatggccgcg ccttttcttt ttatgtggtc
201 cccacgaggg ttccacagac gtcactgtca accaatcaaa ttccatcctc
251 aaacgttaga taagtgttca tttgtcttta tatacttggt ccccaagtag
301 tttgtcttgc actatgtggg atccacttct aaatgaattt cctgaatctg
351 ttcacggatt tcgttgtgtg ttagctatta aatatttgca gtccgttgag
401 gaaacttatg agcccaatac attgggccac gatttaatta gggatcttat
451 atctgttgta agggcccgtg actatgtcga agcgaccagg cgatataatc
501 atttccacgc ccgtctcgaa ggttcgccga aagctgaact tcgacagccc
551 atacagcagc cgtgctgctg tccccattgt ccaaggcaca aacaagcgac
601 gatcatggac gtacaggccc atgtaccgga agcccagaat atacagaatg
651 tatcgaagcc ctgatgttcc tcgtggatgt gaaggcccat gtaaagtcca
701 gtcttatgag caacgggatg atattaggca tactggtatt gttcgttgtg
751 ttagtgatgt tactcgtgga tctggaatta ctcacagagt gggtaagagg
801 ttttgtgtta aatcgatata ttttttaggt aaagtctgga tggatgaaaa
851 tatcaagaag cagaatcaca ctaatcaggt catgttcttc ttggttcgtg
901 atagaaggcc ctatggaaac agcccaatgg attttggaca ggtttttaat
951 atgttcgata atgagcccag taccgcaact gtgaagaatg atttgcggga
1001 tatgtttcaa gtgatgagga aatttcatgc tacagttatt ggtgggccct
1051 ctggaatgaa ggaacaggca ttagttaaga gattttttag aattaacagt
1101 catgtaactt ataatcatca ggaggcagcc aagtacgaga accatactga
1151 aaacgccttg ttattgtata tggcatgtac gcatgcctct aatccagtgt
1201 atgcaactat gaaaatacgc atctatttct atgattcaat atcaaattaa
1251 taaaatttat attttatatc atgagtttct gttacattta ttgtgttttc
1301 aagtacatca tacaatacat gatcaactgc tctgattaca ttgttaattg
1351 aaattacacc aagagtatct aaatacttaa gaacttgata tctaaatact
1401 cttaagaaac gaccagtctg aggctgtaat gtcgtccaaa ttcggaagtt
1451 gagaaaacat ttgtgaatcc ccaatatctt cctgatgttg tggttgaatc
1501 ttatctgaat ggaaatgatg tcgtggttca ttagaaatgg cctctggctg
1551 tgttctgtta tcttgaaata gaggggattg tttatctccc agataaaaac
1601 gccattctct gcttgaggag cagtgatgag ttcccctgtg cgtgaatcca
1651 tgattgttgc agttgatgtg gaggtagtat gagcagccac agtctaggtc
1701 tacacgctta cgccttattg gtttcttctt ggctatcttg tgttggacct
1751 tgattgatac ttgcgaacag tggctcgtag agggtgatga aggttgcatt
1801 cttgagagcc caatttttca aggatatgtt tttttcttcg tctagatatt
1851 ccctatatga ggaggtaggt cctggattgc agaggaagat agtgggaatt
1901 ccccctttaa tttgaatggg cttcccgtac tttgtgttgc tttgccagtc
1951 cctctgggcc cccatgaatt ccttgaagtg ctttaaataa tgcgggtcta
2001 cgtcatcaat gacgttgtac cacgcatcat tactgtacac ctttgggctt
2051 aggtctagat gtccacataa ataattatgt gggcctagag acctggccca
2101 cattgtcttg cctgttctgc tatcaccctc aatgacaata cttatgggtc
2151 tccatggccg cgcagcggaa gatacgacgt tctcggcgac ccactcttca
2201 agttcatctg gaacttgatt aaaagaagaa gaaagaaatg gagaaacata
2251 aacgtctaaa ggaggactaa aaatcctatc taaatttgaa cttaaattat
2301 gaaattgtaa aatatagtcc tttggggcct tctcttttaa tatattgagg
2351 gcctcggatt tactgcctga attgagtgcc tcggcatatg cgtcgttggc
2401 agattgctga cctcctctag ctgatctgcc atcgatttgg aaaactccaa
2451 aatcaatgaa gtctccgtct ttctccacgt aggtcttgac atctgttgag
2501 ctcttagctg cctgaatgtt cggatggaaa tgtgctgacc tgtttgggga
2551 taccaggtcg aagaaccgtt ggttcttaca ttggtacttt ccttcgaatt
2601 ggataagcac atggagatgt ggttccccat tctcgtggag ttctctgcaa
2651 actttgatgt attttttatt tgttggggtt tctaggtttt ttaattggga
2701 aagtgcttcc tctttagaga gagaacaatt gggatatgtt aggaaataat
2751 ttttggcata tattgtaaat aaacgaggca t