Sequence of DPV Grapevine leafroll-associated virus 3

Grapevine leafroll-associated virus 3 isolate SD-1 coat protein gene, complete cds.

ACC No: KC477161

Dated: 2013-05-15 | Length: 942 | CRC: 513152752

                
ID   KC477161; SV 1; linear; genomic RNA; STD; VRL; 942 BP.
XX
AC   KC477161;
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DT   15-MAY-2013 (Rel. 116, Created)
DT   15-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Grapevine leafroll-associated virus 3 isolate SD-1 coat protein gene,
DE   complete cds.
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KW   .
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OS   Grapevine leafroll-associated virus 3
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Ampelovirus.
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-942
RA   Liu M., Li M., Qi H., Cheng Y.;
RT   "Occurrence of Grapevine Leafroll-Associated Viruses in China";
RL   Plant Dis. 0:0-0(2013).
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RN   [2]
RP   1-942
RA   Liu M., Li M., Qi H., Cheng Y.;
RT   ;
RL   Submitted (03-JAN-2013) to the INSDC.
RL   Department of Pomology, China Agricultural University, No. 2 Yuanmingyuan
RL   West Road, Haidian District, Beijing, Beijing 100193, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .942
FT                   /organism="Grapevine leafroll-associated virus 3"
FT                   /host="grape; cultivar: Cow's Nipple"
FT                   /isolate="SD-1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="05-Sep-2009"
FT                   /db_xref="taxon:55951"
FT   CDS             1. .942
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AGG08754.1"
FT                   /translation="MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQ
FT                   AELTGIAVVPEKYVFATAALATAAQEPPRQPPAQVVEPQETDIGVVPESETLTPNKLVF
FT                   EKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADD
FT                   AATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKLYAVWVYDRIKQAAASTGYE
FT                   NPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAI
FT                   LAWNLARQQAFRNKTVTADNTLHNVFQLLQKK"
XX
SQ   Sequence 942 BP; 295 A; 193 C; 247 G; 207 T; 0 other;

kc477161 Length: 942  15-MAY-2013  Type: N  Check: 5143  ..

       1  atggcatttg aactgaaatt agggcagata tatgaagtcg tccccgaaaa
      51  taatttgaga gttagagtag gggatgcggc acaaggaaaa tttagtaagg
     101  cgagtttctt aaagtacgtt aaggacggga cacaggcgga attaacggga
     151  atcgccgtag tgcccgaaaa atacgtgttc gccacagcag ctttggctac
     201  agcggcgcag gagccaccta ggcagccacc agcgcaagtg gtggaaccac
     251  aggaaaccga tataggggta gtgccggaat ctgagactct cacaccaaat
     301  aagttggttt tcgagaaaga tccagacaag ttcttgaaga ctatgggcaa
     351  gggaatagct ttggacttga cgggagttac ccacaaaccg aaagttatta
     401  acgagccagg gaaagtatca gtagaggtgg caatgaagat taatgccgca
     451  ttgatggagc tgtgtaagaa ggttatgggc gccgatgacg cagcaactaa
     501  gacaaaattc ttcttgtacg tgatgcagat tgcttgcacg ttcttcacat
     551  cgtcttcgac ggagttcaaa gagtttgact acatagaaac cgatgatgga
     601  aagaagctat atgcggtgtg ggtatatgat cgcattaaac aagctgctgc
     651  ttcgacgggt tatgaaaacc cggtaaggca gtatctagcg tacttcacac
     701  caaccttcat cacggcgacc ctgaatggta aactagtgat gaacgagaag
     751  gttatggcac agcatggagt accaccgaaa ttctttccgt acacgataga
     801  ctgcgttcgt ccgacgtacg atctgttcaa caacgacgca atactagcat
     851  ggaatttagc tagacagcag gcgtttagaa acaagacggt aacggccgat
     901  aacaccttac acaacgtctt ccaactattg caaaagaagt ag