Sequence of DPV Sweet potato leaf curl Sichuan virus
Sweet potato leaf curl China Sichuan virus-[China:Sichuan15:2012], complete genome.
ACC No: KC488316
Dated: 2013-03-01 | Length: 2764 | CRC: -2073191726
ID KC488316; SV 1; circular; genomic DNA; STD; VRL; 2764 BP.
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AC KC488316;
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DT 25-FEB-2013 (Rel. 115, Created)
DT 01-MAR-2013 (Rel. 116, Last updated, Version 2)
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DE Sweet potato leaf curl China Sichuan virus-[China:Sichuan15:2012], complete
DE genome.
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KW .
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OS Sweet potato leaf curl China Sichuan virus-[China:Sichuan15:2012]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2764
RA Liu Q.L., Zhang Z.C., Qiao Q., Qin Y.H., Zhang D.S., Tian Y.T., Wang S.,
RA Wang Y.J.;
RT "A novel begomovirus infecting sweet potato in China";
RL Unpublished.
XX
RN [2]
RP 1-2764
RA Liu Q.L., Zhang Z.C., Qiao Q., Qin Y.H., Zhang D.S., Tian Y.T., Wang S.,
RA Wang Y.J.;
RT ;
RL Submitted (08-JAN-2013) to the INSDC.
RL Institute of Plant Protection, Henan Academy of Agricultural Sciences, No.
RL 116, Huayuan Road, Zhengzhou, Henan 450002, China
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FH Key Location/Qualifiers
FH
FT source 1. .2764
FT /organism="Sweet potato leaf curl China Sichuan
FT virus-[China:Sichuan15:2012]"
FT /host="Ipomoea batatas"
FT /isolate="China:Sichuan15:2012"
FT /mol_type="genomic DNA"
FT /country="China:Sichuan"
FT /collection_date="May-2012"
FT /db_xref="taxon:1298534"
FT CDS 92. .433
FT /codon_start=1
FT /product="AV2"
FT /protein_id="AGF80244.1"
FT /translation="MDLWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELCS
FT ELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFK
FT RRPDEEKEG"
FT CDS 258. .1022
FT /codon_start=1
FT /product="AV1"
FT /protein_id="AGF80245.1"
FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV
FT PVSRGVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK
FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFAQAFTMYDNEPTTA
FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALVRKFFKSLYNHVTYNHKEEAKYENHLE
FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN"
FT CDS complement(1019. .1453)
FT /codon_start=1
FT /product="AC3"
FT /protein_id="AGF80246.1"
FT /translation="MDSRTGELLSHAQTTRAVEFFDNPMSIGRTAPFFLKCLYAHRSEA
FT GKTIMKFQLQVNHREMKQLGFHKIFLQFRIISTRLTGAIHSWTGILTRLKWRICNELSS
FT LGYFSLYNLVYVIRHLPQEFLWVEEVDVIDCKDDIKVLLY"
FT CDS complement(1170. .1613)
FT /codon_start=1
FT /product="AC2"
FT /protein_id="AGF80247.1"
FT /translation="MSEAHSGDKRKAPIQEPIHAAAKKKRRIPEQRTRIVWKQCGCSAF
FT ITPQCKYQNGFTHWGITKSCTDYESSRILRQPHVNWSDCTVFPQVFIRPPERSGENNHE
FT VPTASEPPRDEATGLPQDIPAVQDNFNPSDWCYSQLDWYFDTP"
FT CDS complement(1546. .2616)
FT /codon_start=1
FT /product="AC1"
FT /protein_id="AGF80248.1"
FT /translation="MVRAPGFRLQAKNIFLTYPKCPLSKESVLELLKGIQCPSDKLFIR
FT VAQEKHQDGSLHLHALIQFKGKCQFTNPRHFDLTHPNSSTQYHPNFQSAKSSSDVKAYI
FT EKDQDFVDSGVFQVDGRSARGGQQTANDAYAQALNTGCKSEALQIIKELCPKDFVLQFH
FT NINNNLDRIFSPPPSVYSSPFSSSSFNAVPDIISNWAAENVMDSAARPDRPISIVIEGP
FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVDPQYLKHFKEFIGAQRDW
FT PSNTKYGKPVQIKGGIPTIFLCNPGEGSSFKSWLDKPEQDALRQWACKNAVFCNVRSPF
FT WRQEEGANSGANSRSG"
FT CDS complement(2202. .2459)
FT /codon_start=1
FT /product="AC4"
FT /protein_id="AGF80249.1"
FT /translation="MGACTSMLSSNSKVSANSQTPGTSTLLTPTPLHNTTPISNQQSPR
FT PMSRPTLRRTKILLTVESSRSTEEVLEEVSKRLTMLTPRH"
XX
SQ Sequence 2764 BP; 725 A; 572 C; 660 G; 807 T; 0 other;
kc488316 Length: 2764 01-MAR-2013 Type: N Check: 3059 ..
1 accggtgccc gcgcaaattt ttaatgtggg ccccacgcgc tttgctttaa
51 tcattaaaag cagcgtcttg tagcattctt tgtcgccaag gatggatttg
101 tgggacccac tgcagaaccc tctccctgat actttatacg gttttcgttg
151 tatgctttct gtaaaatacc tgcaaggtat tttgaagaaa tacgagccag
201 gaaccttagg gttcgagctc tgttcggagc taatccgtat attcagagtc
251 aggcagtatg acagggcgaa ttcccgtttc gcggagattt catccctatg
301 gggggagacc ggtaagacgg aggctgaact tcgagacagc tatcgtgccc
351 tacactggga atgctgtccc aattgctgcc cgaagctatg tcccggtttc
401 aagaggcgtc cagatgaaga gaaggaaggg tgaccgcatc ccgaagggat
451 gtgtgggtcc ttgtaaggtc caggactatg agttcaagat ggacgttccc
501 cacacgggaa cgtttgtctg tgtctcggat tttacaaggg gaactgggct
551 tacccatcgt ttgggtaaga gggtgtgtat taagtccatg ggtattgacg
601 gtaaagtctg gatggacgac aacgtcgcca agagagacca taccaacatt
651 attacttact ggttgattcg agataggagg cccaataagg acccattgac
701 gtttgcacag gcctttacta tgtatgataa tgaacccact actgctaaga
751 tccgtatgga tctgagagat agaatgcagg tcttgaagaa attctctgtt
801 actgtgtctg gtgggcctta tagccacaag gagcaggcgt tagttaggaa
851 gttttttaag agtttgtata atcatgttac ttataatcat aaggaagaag
901 ctaagtatga aaatcattta gaaaatgcat taatgttgta ttctgctagc
951 agtcatgcta gcaatcctgt atatcagacc ctgcgttgca gggcttattt
1001 ctatgattcg cacaataatt aataaagaag tacttttata tcatctttgc
1051 aatctattac atcgacttct tctacccaca agaactcttg tggtaaatgt
1101 ctaattacat aaactaagtt atacaatgaa aaataaccta aactacttaa
1151 ttcattacaa atacgccatt taaggcgtgt caaaatacca gtccaactgt
1201 gaatagcacc agtcagacgg gttgaaatta tcctgaactg caggaatatc
1251 ttgtggaagc ccagttgctt catctcgcgg tggttcactt gcagttggaa
1301 cttcatgatt gttttccccg cttcgctccg gtgggcgtat aaacacttga
1351 ggaaaaacgg tgcagtccga ccaattgaca tggggttgtc gaagaattcg
1401 actgctctcg tagtctgtgc atgacttagt aattccccag tgcgtgaatc
1451 cattctggta cttgcactga ggtgtgatga aagctgaaca gccgcactgc
1501 ttccacacta tcctggtcct ttgctctggt atgcggcgtt tttttttagc
1551 cgctgcgtga attggctcct gaattggcgc cttcctcttg tctccagaat
1601 gggcttctga cattacagaa tactgcgttc ttgcaagccc actgcctcag
1651 tgcgtcttgt tctggcttat ctagccagga tttaaatgat gatccttcgc
1701 ctggattgca gaggaagata gtgggaattc cacctttaat ttgaactggc
1751 ttcccgtact ttgtgtttga tggccagtcc ctctgggccc caatgaattc
1801 cttaaagtgc tttaggtatt gggggtcgac gtcatcaatg acgttgtacc
1851 acgcactgtt actgtacact ttagggctta gatctaaatg cccacacaaa
1901 taattgtgag gacccaaaga cctggcccat actgttttgc ctattctgct
1951 tgggccttct ataacaatgg atatgggtct atccggccgc gcagcggaat
2001 ccatgacatt ttcagcggcc caattgctga taatgtcagg aacggcatta
2051 aaagaagaag aagaaaaagg tgaagaatat acagaaggag gaggagaaaa
2101 aatcctatct aaattattat taatattatg gaattgaaga acaaagtctt
2151 ttggacacaa ttcctttatt atctgtaacg cttcagattt acacccagta
2201 tttaatgcct gggcgtaagc atcgttagcc gtttgctgac ctcctctagc
2251 acttcttccg tcgacctgga agactccact gtcaacaaaa tcttggtcct
2301 tctcaatgta ggccttgaca tcggacgagg actttgctga ttggaaattg
2351 gggtggtatt gtgtagagga gttggggtga gtaaggtcga agtgcctggg
2401 gtttgtgaat tggcacttac ctttgaattg gatgagagca tggaggtgca
2451 ggctcccatc ctggtgtttc tcttgagcaa ctcggataaa taatttatca
2501 gaagggcatt gaatgccctt taataactca aggactgatt ctttagatag
2551 ggggcatttt gggtaagtga ggaatatatt tttggcttga agtctaaagc
2601 cgggtgctct caccatgttg acttggtcaa ttggagtaac accttcctgc
2651 catgcaattg gagtaatgga gtagaatata tagtggttgg attttcagac
2701 ctccattttg aaattcaaat tccgacaact ttgggcccac aaaagcgggc
2751 accgtattaa tatt