Sequence of DPV Ageratum yellow vein virus
Ageratum yellow vein China virus isolate Sn1 segment DNA-A, complete sequence.
ACC No: KC577539
Dated: 2013-05-20 | Length: 2754 | CRC: -777178120
ID KC577539; SV 1; circular; genomic DNA; STD; VRL; 2754 BP.
XX
AC KC577539;
XX
DT 20-MAY-2013 (Rel. 116, Created)
DT 20-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE Ageratum yellow vein China virus isolate Sn1 segment DNA-A, complete
DE sequence.
XX
KW .
XX
OS Ageratum yellow vein China virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2754
RA She X.M., He Z.F.;
RT "Submission directly";
RL Unpublished.
XX
RN [2]
RP 1-2754
RA She X.M., He Z.F.;
RT ;
RL Submitted (05-FEB-2013) to the INSDC.
RL Plant Protection Research Institute, Guangdong Academy of Agricultural
RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640,
RL China
XX
FH Key Location/Qualifiers
FH
FT source 1. .2754
FT /organism="Ageratum yellow vein China virus"
FT /segment="DNA-A"
FT /host="Synedrella nodiflora L.Gaertn"
FT /isolate="Sn1"
FT /mol_type="genomic DNA"
FT /country="Philippines:Davao"
FT /collection_date="26-Sep-2012"
FT /db_xref="taxon:202567"
FT gene 132. .482
FT /gene="AV2"
FT CDS 132. .482
FT /codon_start=1
FT /gene="AV2"
FT /product="movement protein"
FT /protein_id="AGL74865.1"
FT /translation="MWDPLLNEFPETVHGLRCMLAIKYLQLVENTYSPDTLGYDLVRDL
FT ILVIRARNYVEASRRYSHFHSRLEGTSPSELRHPRDEPCCCPHCPRHKQKEVMDQQAHV
FT SQAQNVQNVQKP"
FT gene 292. .1065
FT /gene="AV1"
FT CDS 292. .1065
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AGL74866.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNRKRSW
FT TNRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTH
FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNE
FT PSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYDN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT gene complement(1062. .1466)
FT /gene="AC3"
FT CDS complement(1062. .1466)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="AGL74867.1"
FT /translation="MDFRTGELLTATQCESGVYTWTIKNPLYFKITQHDERPFMTNKDI
FT ITIQIQFNYNLRKALGIHQCFLIFKIWTRLRPQTWRFLRVFKYQCMKYLDSLGVVSINN
FT VIRACNHVLWDVLENTEYVTHSHIIKFNLY"
FT gene complement(1207. .1614)
FT /gene="AC2"
FT CDS complement(1207. .1614)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="AGL74868.1"
FT /translation="MQNSSPSHNHCTQVPIKVKHRIAKKRTVRRRRVDLTCGCSYYFGI
FT HCANHGFSHRGITHCNSMREWRVYLDNQKSPIFQDNPTRRETIHDEQRHHNDPNTVQLQ
FT PEESVGNTPVFSDLQNMDSFTSSDLAFLKSI"
FT gene complement(1514. .2602)
FT /gene="AC1"
FT CDS complement(1514. .2602)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication initiator protein"
FT /protein_id="AGL74869.1"
FT /translation="MPPPKKFRINAKNYFLTYPQCSLTKDDALSQLQTLETPTNKKYIK
FT ICRELHEDGSPHIHVLIQFEGRFQCQNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAKALNSGSKSEALNVIKELAPKDFVLQFH
FT NLNSNLDRIFSPPLEVFVCPFLSSSFDQVPEELEEWVSENVRDAAARPWRPKSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKDWALKNAEFITITQPL
FT YSGTNQSETQNSQEEDSSETES"
FT gene complement(2155. .2445)
FT /gene="AC4"
FT CDS complement(2155. .2445)
FT /codon_start=1
FT /gene="AC4"
FT /product="C4 protein"
FT /protein_id="AGL74870.1"
FT /translation="MGALISTCSSSSRAGSSAKITDSSIWYPLPGQHISIRTFRELNPA
FT PTSSPISTRTETLSNGANSRSTDDLHEGDNRQPMMLTPRHLTAAVSQRLLM"
XX
SQ Sequence 2754 BP; 745 A; 548 C; 581 G; 880 T; 0 other;
kc577539 Length: 2754 20-MAY-2013 Type: N Check: 353 ..
1 accggatggc cgcgattttt ttaaagtgga ccctcccact aacatttgtc
51 tgccaataag aacgctcctt caaagcttat ttattatttc gtccttataa
101 atacttggtc actacgtttt taaattgcat aatgtgggat ccactcttaa
151 acgagttccc agaaaccgta catggtctac ggtgtatgct tgctattaag
201 tatttacaac ttgttgaaaa tacgtactca ccggatactc tgggatacga
251 tcttgtacgt gatttaatac ttgttatcag agctcgcaat tatgtcgaag
301 cgtcccgccg atatagtcat ttccactccc gcctcgaagg tacgtcgccg
351 tctgaacttc gacacccccg tgatgagccg tgctgctgcc cccactgtcc
401 tcgtcacaaa cagaaagagg tcatggacca acaggcccat gtatcgcaag
451 cccagaatgt acagaatgta cagaagccct gatgttccca aaggttgtga
501 aggcccatgt aaggtccaat cgtatgaaca gaggcacgac atatcccatg
551 ttggtaaagt attatgtgtt agtgatgtca ctcgtggtag tgggcttacc
601 catcgtgttg gtaagagatt ctgtgtcaag tccgtttatg tattgggtaa
651 aatatggatg gatgaaaata tcaaaaccaa gaaccatacg aacactgtga
701 tgttttatct tgttcgtgat agaaggcctt ttggtactgc tatggatttt
751 ggtcaggtgt ttaacatgta tgataatgag cccagtactg ctactatcaa
801 gaatgatctt cgagatcgtt atcaagtttt aaggaaattc acttctacag
851 tcacaggtgg tcaatatgct tctaaggaac aggcgttggt taggaaattt
901 atgaagatta ataattatgt agtttataat catcaagaag ctgctaagta
951 tgacaatcat actgagaatg ctttgttatt gtatatggct tgtactcatg
1001 ccagtaatcc agtgtatgct actttgaaga tcagaatcta tttctatgat
1051 tctgttcaga attaataaag attgaatttt attatatgag aatgtgttac
1101 atattctgtg ttttccaata catcccataa tacatgatta catgctctaa
1151 ttacattgtt aatactaact acacccaaac tatctaaata cttcatacat
1201 tgatatttaa atactcttaa gaaacgccaa gtctgaggac gtaaacgagt
1251 ccatattttg aagatcagaa aacactggtg tattcccaac gctttcctca
1301 ggttgtagtt gaactgtatt tggatcgtta tgatgtcttt gttcgtcatg
1351 aatggtctct cgtcgtgttg ggttatcttg aaatataggg gatttttgat
1401 tgtccaggta tacacgccac tctcgcattg agttgcagtg agtaattccc
1451 ctgtgcgaaa atccatgatt tgcacaatgt atgccgaagt agtatgagca
1501 cccacacgtt agatcaactc tccgtctccg aactgtcctc ttcttggcta
1551 ttctgtgttt cactttgatt ggtacctgag tacaatggtt gtgtgatggt
1601 gatgaattct gcattcttta atgcccagtc tttgagtgca gaatttttat
1651 cctcgtccaa gtactcttta tatgatgatg ttgggcctgg attgcatagg
1701 aagatagtgg gaattccacc tttaatttga atgggcttcc cgtactttgt
1751 gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta
1801 agtagtgggg atcgacgtca tcaatgacgt tgtaccaggc atcattattg
1851 tatacctttg gactgagatc cagatgccca cacaaataat tatgtggtcc
1901 tagagacctg gcccacattg tcttccccgt tctactatcg ccctctatga
1951 caatactttt aggtctccaa ggccgcgcag cggcatccct tacattctcg
2001 gagacccact cttcaagttc ttctggaact tgatcaaatg aagaagaaag
2051 aaaaggacaa acaaaaacct ctaaaggagg tgaaaaaatc ctatctaaat
2101 tagaatttaa attatgaaat tgtaaaacaa aatctttagg agctaactcc
2151 ttaattacat taagagcctc tgacttactg ccgctgttaa gtgccttggc
2201 gtaagcatca ttggctgtct gttgtccccc tcgtgcagat cgtccgtcga
2251 tctggaattc gccccattcg agagtgtctc cgtccttgtc gatataggac
2301 ttgacgtcgg agctggattt agctccctga atgttcggat ggaaatgtgc
2351 tgacctggaa ggggatacca gatcgaagaa tctgttattt tggcactgga
2401 acctgccctc gaactggatg agcacgtgga tatgagggct cccatcttcg
2451 tgaagctctc gacagatctt gatgtatttt ttatttgttg gtgtttctag
2501 ggtttgcaat tgggaaagtg cgtcgtcttt agtaagagag cattgtggat
2551 aagtgaggaa ataatttttg gcatttattc gaaatttttt aggtggaggc
2601 atgttgactt ggtcaatcgg tgtctctcag agtattatgg caatcggtgt
2651 atggtgtctt atttatagct agacaccaaa tggcattatc gtaattctca
2701 aaagtaattc aaaattcaaa ttttgaatcg aaaagcggcc atccgtataa
2751 tatt