Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AR2 coat protein gene, complete cds.
ACC No: KC590489
Dated: 2013-03-19 | Length: 672 | CRC: -394847810
ID KC590489; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC KC590489; XX DT 19-MAR-2013 (Rel. 116, Created) DT 19-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Citrus tristeza virus isolate AR2 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Tarafdar A., Khatun D., Biswas K.K.; RT "Characterization of Citrus tristeza virus and determination of genetic RT variability in Northeast and South India"; RL Unpublished. XX RN [2] RP 1-672 RA Tarafdar A., Khatun D., Biswas K.K.; RT ; RL Submitted (07-FEB-2013) to the INSDC. RL Advanced Centre for Plant Virology, Division of Plant Pathology, Indian RL Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012, RL India XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus aurantifolia (Kagzi lime)" FT /isolate="AR2" FT /mol_type="genomic RNA" FT /country="India:Tinsukia, Assam" FT /collected_by="K K Biswas" FT /collection_date="Apr-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /note="ORF7" FT /protein_id="AGH18404.1" FT /translation="MDDETKKLKNKNKETKEGDDVAAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT FT YTRDGVEVDLSDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 195 A; 125 C; 172 G; 180 T; 0 other; kc590489 Length: 672 19-MAR-2013 Type: N Check: 3145 .. 1 atggacgacg aaacaaagaa actgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgctgcag ctgagtcttc tttcggttcc gtaaatttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ctgctttgaa cagagatttg tttcttacct tgaaagggaa 201 gtatcctaac ttacctgaca aagacaaaga ctttcatata gctatgatgt 251 tatatcgttt agcggttaag agttcatcat tacaaagcga cgatgacacc 301 acgggtgtaa cgtacactcg ggacggtgtt gaagtggatt tatctgacaa 351 gctttggact gacgtagtgt ttaactctaa gggtattggt aaccgcgcta 401 acgcccttcg agtctggggt agaactaacg atgcccttta tttggctttt 451 tgtagacaga accgcaattt gagttatggt ggacgtccgt tagatgcggg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttggaatgt gcagtgtaca tacaagctaa agagcaatta 601 ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct 651 tgggaaattt aacacacgtt ga