Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate MB7 coat protein gene, complete cds.
ACC No: KC590496
Dated: 2013-03-19 | Length: 672 | CRC: -382577709
ID KC590496; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC KC590496; XX DT 19-MAR-2013 (Rel. 116, Created) DT 19-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Citrus tristeza virus isolate MB7 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Biswas K.K., Tarafdar A., Khatun D.; RT "Characterization of Citrus tristeza virus and determination of genetic RT variability in Northeast and South India"; RL Unpublished. XX RN [2] RP 1-672 RA Biswas K.K., Tarafdar A., Khatun D.; RT ; RL Submitted (08-FEB-2013) to the INSDC. RL Advanced Centre for Plant Virology, Division of Plant Pathology, Indian RL Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012, RL India XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus reticulata (Khasi mandarin)" FT /isolate="MB7" FT /mol_type="genomic RNA" FT /country="India:Barapani, Meghalaya" FT /collected_by="K K Biswas" FT /collection_date="Apr-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /note="ORF7" FT /protein_id="AGH18411.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKAKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 190 A; 123 C; 176 G; 183 T; 0 other; kc590496 Length: 672 19-MAR-2013 Type: N Check: 4853 .. 1 atggacgacg agacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ccgctttgaa cagagacttg tttcttactt tgaaagcgaa 201 gtatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtgcta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaaa atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tggaaaattt aacacacgtt ga