Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AG26 coat protein gene, complete cds.
ACC No: KC590497
Dated: 2013-03-19 | Length: 672 | CRC: 321958941
ID KC590497; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC KC590497; XX DT 19-MAR-2013 (Rel. 116, Created) DT 19-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Citrus tristeza virus isolate AG26 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Biswas K.K., Khatun D., Tarafdar A.; RT "Characterization of Citrus tristeza virus and determination of genetic RT variability in Northeast and South India"; RL Unpublished. XX RN [2] RP 1-672 RA Biswas K.K., Khatun D., Tarafdar A.; RT ; RL Submitted (08-FEB-2013) to the INSDC. RL Advanced Centre for Plant Virology, Division of Plant Pathology, Indian RL Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012, RL India XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus reticulata (Khasi mandarin)" FT /isolate="AG26" FT /mol_type="genomic RNA" FT /country="India:Dumduma, Tinsukia, Assam" FT /collected_by="K K Biswas" FT /collection_date="Apr-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /note="ORF7" FT /protein_id="AGH18412.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT FT YTREGVEVELSDKLWTDIVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRYLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYLQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 201 A; 124 C; 166 G; 181 T; 0 other; kc590497 Length: 672 19-MAR-2013 Type: N Check: 3045 .. 1 atggacgacg aaacaaagaa actgaagaac aaaaacaagg aaacgaaaga 51 aggtgacgat gttgttgcag ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacaaaatg ctgctttgaa tagagatctg tttcttactt tgaaagggaa 201 gtatcctaac ttacctgaca aagataaaga ctttcacata gctatgatgt 251 tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc 301 acgggtgtga cgtacactcg ggaaggtgtt gaagtggaac tgtccgacaa 351 actttggaca gacatcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agaactaacg atgcccttta tttagctttt 451 tgtagacaga accgctactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gcagtgtact tacaagctaa agagcaatta 601 ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct 651 tgggaaattt aacacacgtt ga