Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate TP3 coat protein gene, complete cds.
ACC No: KC590501
Dated: 2013-03-19 | Length: 672 | CRC: -210851591
ID KC590501; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC KC590501; XX DT 19-MAR-2013 (Rel. 116, Created) DT 19-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Citrus tristeza virus isolate TP3 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Tarafdar A., Khatun D., Biswas K.K.; RT "Characterization of Citrus tristeza virus and determination of genetic RT variability in Northeast and South India"; RL Unpublished. XX RN [2] RP 1-672 RA Tarafdar A., Khatun D., Biswas K.K.; RT ; RL Submitted (08-FEB-2013) to the INSDC. RL Advanced Centre for Plant Virology, Division of Plant Pathology, Indian RL Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012, RL India XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sinensis (sweet orange)" FT /isolate="TP3" FT /mol_type="genomic RNA" FT /country="India:Tirupati" FT /collected_by="K K Biswas" FT /collection_date="Oct-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /note="ORF7" FT /protein_id="AGH18416.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSANLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKAKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLKWAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 191 A; 123 C; 175 G; 183 T; 0 other; kc590501 Length: 672 19-MAR-2013 Type: N Check: 3113 .. 1 atggacgacg agacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttct gcaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagcgaa 201 gtatcctaat ttgtctgata aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaaa atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttaaagtgg gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattt aacacacgtt ga