Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate K9 coat protein gene, complete cds.
ACC No: KC694141
Dated: 2013-03-19 | Length: 672 | CRC: -102089806
ID KC694141; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC KC694141; XX DT 19-MAR-2013 (Rel. 116, Created) DT 19-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Citrus tristeza virus isolate K9 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Divedi S., Tarafdar A., Biswas K.K.; RT "Characterization of Citrus tristeza virus and determination of genetic RT variability in Northeast and South India"; RL Unpublished. XX RN [2] RP 1-672 RA Divedi S., Tarafdar A., Biswas K.K.; RT ; RL Submitted (21-FEB-2013) to the INSDC. RL Advanced Centre for Plant Virology, Division of Plant Pathology, Indian RL Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012, RL India XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus aurantifolia (Kagzi lime)" FT /isolate="K9" FT /mol_type="genomic RNA" FT /country="India:IARI-RS, Kalimpong" FT /collected_by="K K Biswas" FT /collection_date="2007" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /note="ORF7" FT /protein_id="AGH18426.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGMT FT YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 198 A; 124 C; 171 G; 179 T; 0 other; kc694141 Length: 672 19-MAR-2013 Type: N Check: 3066 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg agacgaaaga 51 aggcgacgat gttgttgcag cagagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ctgctttgaa tagagatttg tttcttacct tgaaagggaa 201 gtatcctaac ttacctgaca aagataaaga ctttcacata gctatgatgt 251 tataccgttt agcagttaag agttcgtcgt tacaaagcga cgatgatacc 301 acgggtatga cgtacactcg ggaaggtgtt gaagtggaac tgtctgacaa 351 actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agatctaacg atgcccttta tttggctttt 451 tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gcagtgtaca tacaagctaa agagcaatta 601 ttgaaaaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct 651 tgggaaattt aacacacgtt ga