Sequence of DPV Cryphonectria mitovirus 1

Cryphonectria parasitica mitovirus 1-NB631 putative RNA-dependent RNA polymerase gene, complete cds.

ACC No: L31849

Dated: 2002-06-20 | Length: 2728 | CRC: -164609556

                !!NA_SEQUENCE 1.0
ID   CPDSRE     standard; RNA; VRL; 2728 BP.
XX
AC   L31849;
XX
SV   L31849.1
XX
DT   13-MAY-1994 (Rel. 39, Created)
DT   20-JUN-2002 (Rel. 72, Last updated, Version 7)
XX
DE   Cryphonectria parasitica mitovirus 1-NB631 putative RNA-dependent RNA
DE   polymerase gene, complete cds.
XX
KW   .
XX
OS   Cryphonectria parasitica mitovirus 1-NB631
OC   Viruses; ssRNA negative-strand viruses; Narnaviridae; Mitovirus.
XX
RN   [1]
RP   1-2728
RX   MEDLINE; 94359995.
RX   PUBMED; 7521532.
RA   Polashock J.J., Hillman B.I.;
RT   "A small mitochondrial double-stranded (ds) RNA element associated with a
RT   hypovirulent strain of the chestnut blight fungus and ancestrally related
RT   to yeast cytoplasmic T and W dsRNAs";
RL   Proc. Natl. Acad. Sci. U.S.A. 91(18):8680-8684(1994).
XX
DR   SPTREMBL; Q33339; Q33339.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2728
FT                   /db_xref="taxon:186769"
FT                   /organism="Cryphonectria parasitica mitovirus 1-NB631"
FT                   /strain="NB631"
FT   CDS             87. .2516
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q33339"
FT                   /note="TAG stop codon exception"
FT                   /transl_except=(pos:132. .134,aa:OTHER)
FT                   /transl_table=4
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /protein_id="AAA61703.1"
FT                   /translation="MAMIIHDPVYKLWYAXRAKSNLPGLAPHKTESITTVLSLTNVKNK
FT                   QATNSILLNKITDLVLGLKAFSIKSKGVRTTLRVNKHWITPKEFPRFVKLVVWCTRTQE
FT                   HEDSFMKIIGKCDHIWQTAGPNFLFKYLKEVMRLSVRRIANIELEPSKKIFVKLNKFRF
FT                   PNIIPLPICDQIIRDQNDQVLWASKRLIICLLTILSVHRVLPTKVVPDYSTIVDPFTGV
FT                   SKTIDQKLLRKAIHLLNIKRVKQLKLKITGSMKAGPNGKISLLTSSVDALSFITQPTKI
FT                   FTYLDFSVRVYKFRGLLLWMWMMCILLITLPYAIVSFMLGALIPIMGKLSVVYDQAGKA
FT                   RIVAITNSWIQTAFYSLHLHVFKLLKNIDQDGTFDQERPFKLLIKWLNEPTQKFYGFDL
FT                   TAATDRLPIDLQVDILNIIFKNSPGSSWRSLLRIKYKSPQGFLTYAVGQPMGAYSSFAM
FT                   LALTHHVIVQVAALNSGFTTRFTDYCILGDDIVIAHDTVASEYLKLMETLGLSISSGKS
FT                   VISSEFTEFAKKLKGRNNFDIFYRSWFSIIHFEKQILHLCTVFELLRRGVCELYDLYPQ
FT                   YINKLPKIYLRYNLLIDWVVVAFTNQILIGDRPRADGIRLFDYFVGLEVIPPLLRIMLH
FT                   TIKKDWNGLWNSIKYTLNKGFVVSQVRVGLPDWTELFLLPILPSTYIIIRDYCRSFNDL
FT                   TKLFGEWWLLRFESESYQVSILDVIDRLAHTSIPNLDIHDKKKVKLTLDNLYKLSLIVN
FT                   IPSGGARRYIEFLRFNGLKSPLIVERYIKDGIRIEKPLTLQGLHRSGDIQLGFKIS"
XX
SQ   Sequence 2728 BP; 842 A; 477 C; 521 G; 888 T; 0 other;

   L31849  Length: 2728  July 2, 2002 09:24  Type: N  Check: 8985  ..

       1  tactgtttct taaaaacagt tgagaatcag tcgagccacg ccccaaatca
      51  gtctctctta tacgtttaca actataaggt gtgctaatgg ctatgatcat
     101  acatgatccg gtatacaaat tgtggtatgc ttagcgagct aagtcgaatc
     151  tgcctgggtt ggcaccccat aagacggaaa gtatcacaac tgttttatcg
     201  ttaacaaacg ttaaaaataa acaagccaca aactcaattc tattaaataa
     251  aataacggat ctagtcttag gactaaaagc gttttctatc aagtcgaagg
     301  gagttaggac aacattgcga gttaataaac attggattac tccaaaagag
     351  tttccaagat ttgttaaact tgtggtgtgg tgtactcgta cgcaggagca
     401  tgaagattct tttatgaaga taataggtaa gtgtgatcac atttgacaga
     451  cagctggacc aaatttcctc tttaaatatt taaaggaggt catgaggttg
     501  agtgtacgga gaattgctaa cattgaacta gaaccttcaa agaaaatctt
     551  cgttaaactt aataagttta gatttcctaa tataattcct cttcctattt
     601  gcgaccaaat tatccgtgat caaaatgatc aggtcctttg ggcaagtaag
     651  agattaatta tatgccttct taccatcctt tcggttcata gagtattgcc
     701  tactaaggta gttcctgatt atagtactat tgttgatccc tttacagggg
     751  tttcaaagac tatagatcag aagcttctta ggaaagcaat acatctattg
     801  aatatcaaaa gggttaagca gttaaagctg aaaataaccg gttccatgaa
     851  agcaggcccg aatggtaaaa tatcattact tacatcttca gtagatgcgt
     901  tgagttttat aactcaaccc accaagattt ttacttacct tgacttttct
     951  gtcagggttt ataaatttcg tgggcttcta ctttggatgt gaatgatgtg
    1001  tattttactt atcactcttc cttatgccat tgtttccttt atgctcggag
    1051  cacttatccc tataatgggt aaattaagtg ttgtttatga tcaagctgga
    1101  aaagcgagaa tcgttgcaat aacgaattcg tgaatccaga ccgcgtttta
    1151  ttccttacat ctacatgtct ttaagttatt aaagaatata gaccaggatg
    1201  gaacgtttga tcaagaacga ccttttaaac tactcattaa gtgattaaat
    1251  gaacctacac aaaagtttta tggttttgat ttaactgctg caacggatag
    1301  acttcctatt gatctccaag ttgatattct taatataata tttaagaatt
    1351  cacctggatc ttcatggcgt tccttattac gtattaagta caaaagccca
    1401  caaggctttc tgacttatgc ggtagggcaa cccatgggag catattcttc
    1451  tttcgctatg cttgcattaa cacatcatgt gattgtgcag gtagccgctt
    1501  taaacagcgg attcactaca cggttcacgg attattgtat attgggtgat
    1551  gatattgtca ttgctcacga tacagtagct agtgaatact taaaattaat
    1601  ggaaacatta ggtttaagta tttctagtgg taaatctgtt atctcaagtg
    1651  aatttactga atttgcaaag aagttgaaag gtcgaaataa tttcgacatt
    1701  ttctatcgga gctggtttag tattattcac tttgagaaac aaatattaca
    1751  tttgtgcact gtatttgaat tactgcgaag gggagtatgt gaactctatg
    1801  atctctaccc ccaatatatt aataagttac ctaagattta tcttagatat
    1851  aacttattaa tagattgagt tgttgtagca tttactaatc aaattctgat
    1901  aggtgaccgt cctagggcgg atggcatcag gctatttgac tactttgtag
    1951  gtttggaggt aattcctcct ctcctacgca taatgctaca taccattaag
    2001  aaagattgaa acggattatg aaattccatc aaatatacct tgaataaagg
    2051  ttttgtggtc tctcaggttc gtgtaggtct gccagactgg actgaattat
    2101  ttttgttgcc catactgcct tcaacctata tcattattag ggattattgt
    2151  aggagtttta acgacctcac taagttattt ggtgagtgat gactattaag
    2201  attcgaatct gaaagttatc aggtaagcat cttagatgtt atcgatcgtt
    2251  tagctcatac atcaatacct aatcttgata tacatgataa gaagaaagtt
    2301  aaattaactt tggataatct ttacaaatta agtttaattg taaatatccc
    2351  aagcggaggt gcccgtcgtt atatagaatt tctccgattt aacggactta
    2401  agtcgccgtt aattgtggag agatatataa aagacggaat ccgaatcgag
    2451  aaaccactaa ctttgcaagg tttgcataga agcggtgata tccaattagg
    2501  atttaaaatc tcctaacatg tactttagga ataaagtgca tgggtgtccc
    2551  aggaatcgca atcgataaga tcgcgttggg ccctctggtt tgatcaccag
    2601  cggcaccacc gttaaatcag gtgtctggat attacatccc gcagagagat
    2651  acaattctct gacggcatat cataaatagt ttcaaactac cctttggtat
    2701  tgccactgag gctttaggcc tcaatggg