Sequence of DPV Cryphonectria mitovirus 1
Cryphonectria parasitica mitovirus 1-NB631 putative RNA-dependent RNA polymerase gene, complete cds.
ACC No: L31849
Dated: 2002-06-20 | Length: 2728 | CRC: -164609556
!!NA_SEQUENCE 1.0 ID CPDSRE standard; RNA; VRL; 2728 BP. XX AC L31849; XX SV L31849.1 XX DT 13-MAY-1994 (Rel. 39, Created) DT 20-JUN-2002 (Rel. 72, Last updated, Version 7) XX DE Cryphonectria parasitica mitovirus 1-NB631 putative RNA-dependent RNA DE polymerase gene, complete cds. XX KW . XX OS Cryphonectria parasitica mitovirus 1-NB631 OC Viruses; ssRNA negative-strand viruses; Narnaviridae; Mitovirus. XX RN [1] RP 1-2728 RX MEDLINE; 94359995. RX PUBMED; 7521532. RA Polashock J.J., Hillman B.I.; RT "A small mitochondrial double-stranded (ds) RNA element associated with a RT hypovirulent strain of the chestnut blight fungus and ancestrally related RT to yeast cytoplasmic T and W dsRNAs"; RL Proc. Natl. Acad. Sci. U.S.A. 91(18):8680-8684(1994). XX DR SPTREMBL; Q33339; Q33339. XX FH Key Location/Qualifiers FH FT source 1. .2728 FT /db_xref="taxon:186769" FT /organism="Cryphonectria parasitica mitovirus 1-NB631" FT /strain="NB631" FT CDS 87. .2516 FT /codon_start=1 FT /db_xref="SPTREMBL:Q33339" FT /note="TAG stop codon exception" FT /transl_except=(pos:132. .134,aa:OTHER) FT /transl_table=4 FT /product="putative RNA-dependent RNA polymerase" FT /protein_id="AAA61703.1" FT /translation="MAMIIHDPVYKLWYAXRAKSNLPGLAPHKTESITTVLSLTNVKNK FT QATNSILLNKITDLVLGLKAFSIKSKGVRTTLRVNKHWITPKEFPRFVKLVVWCTRTQE FT HEDSFMKIIGKCDHIWQTAGPNFLFKYLKEVMRLSVRRIANIELEPSKKIFVKLNKFRF FT PNIIPLPICDQIIRDQNDQVLWASKRLIICLLTILSVHRVLPTKVVPDYSTIVDPFTGV FT SKTIDQKLLRKAIHLLNIKRVKQLKLKITGSMKAGPNGKISLLTSSVDALSFITQPTKI FT FTYLDFSVRVYKFRGLLLWMWMMCILLITLPYAIVSFMLGALIPIMGKLSVVYDQAGKA FT RIVAITNSWIQTAFYSLHLHVFKLLKNIDQDGTFDQERPFKLLIKWLNEPTQKFYGFDL FT TAATDRLPIDLQVDILNIIFKNSPGSSWRSLLRIKYKSPQGFLTYAVGQPMGAYSSFAM FT LALTHHVIVQVAALNSGFTTRFTDYCILGDDIVIAHDTVASEYLKLMETLGLSISSGKS FT VISSEFTEFAKKLKGRNNFDIFYRSWFSIIHFEKQILHLCTVFELLRRGVCELYDLYPQ FT YINKLPKIYLRYNLLIDWVVVAFTNQILIGDRPRADGIRLFDYFVGLEVIPPLLRIMLH FT TIKKDWNGLWNSIKYTLNKGFVVSQVRVGLPDWTELFLLPILPSTYIIIRDYCRSFNDL FT TKLFGEWWLLRFESESYQVSILDVIDRLAHTSIPNLDIHDKKKVKLTLDNLYKLSLIVN FT IPSGGARRYIEFLRFNGLKSPLIVERYIKDGIRIEKPLTLQGLHRSGDIQLGFKIS" XX SQ Sequence 2728 BP; 842 A; 477 C; 521 G; 888 T; 0 other; L31849 Length: 2728 July 2, 2002 09:24 Type: N Check: 8985 .. 1 tactgtttct taaaaacagt tgagaatcag tcgagccacg ccccaaatca 51 gtctctctta tacgtttaca actataaggt gtgctaatgg ctatgatcat 101 acatgatccg gtatacaaat tgtggtatgc ttagcgagct aagtcgaatc 151 tgcctgggtt ggcaccccat aagacggaaa gtatcacaac tgttttatcg 201 ttaacaaacg ttaaaaataa acaagccaca aactcaattc tattaaataa 251 aataacggat ctagtcttag gactaaaagc gttttctatc aagtcgaagg 301 gagttaggac aacattgcga gttaataaac attggattac tccaaaagag 351 tttccaagat ttgttaaact tgtggtgtgg tgtactcgta cgcaggagca 401 tgaagattct tttatgaaga taataggtaa gtgtgatcac atttgacaga 451 cagctggacc aaatttcctc tttaaatatt taaaggaggt catgaggttg 501 agtgtacgga gaattgctaa cattgaacta gaaccttcaa agaaaatctt 551 cgttaaactt aataagttta gatttcctaa tataattcct cttcctattt 601 gcgaccaaat tatccgtgat caaaatgatc aggtcctttg ggcaagtaag 651 agattaatta tatgccttct taccatcctt tcggttcata gagtattgcc 701 tactaaggta gttcctgatt atagtactat tgttgatccc tttacagggg 751 tttcaaagac tatagatcag aagcttctta ggaaagcaat acatctattg 801 aatatcaaaa gggttaagca gttaaagctg aaaataaccg gttccatgaa 851 agcaggcccg aatggtaaaa tatcattact tacatcttca gtagatgcgt 901 tgagttttat aactcaaccc accaagattt ttacttacct tgacttttct 951 gtcagggttt ataaatttcg tgggcttcta ctttggatgt gaatgatgtg 1001 tattttactt atcactcttc cttatgccat tgtttccttt atgctcggag 1051 cacttatccc tataatgggt aaattaagtg ttgtttatga tcaagctgga 1101 aaagcgagaa tcgttgcaat aacgaattcg tgaatccaga ccgcgtttta 1151 ttccttacat ctacatgtct ttaagttatt aaagaatata gaccaggatg 1201 gaacgtttga tcaagaacga ccttttaaac tactcattaa gtgattaaat 1251 gaacctacac aaaagtttta tggttttgat ttaactgctg caacggatag 1301 acttcctatt gatctccaag ttgatattct taatataata tttaagaatt 1351 cacctggatc ttcatggcgt tccttattac gtattaagta caaaagccca 1401 caaggctttc tgacttatgc ggtagggcaa cccatgggag catattcttc 1451 tttcgctatg cttgcattaa cacatcatgt gattgtgcag gtagccgctt 1501 taaacagcgg attcactaca cggttcacgg attattgtat attgggtgat 1551 gatattgtca ttgctcacga tacagtagct agtgaatact taaaattaat 1601 ggaaacatta ggtttaagta tttctagtgg taaatctgtt atctcaagtg 1651 aatttactga atttgcaaag aagttgaaag gtcgaaataa tttcgacatt 1701 ttctatcgga gctggtttag tattattcac tttgagaaac aaatattaca 1751 tttgtgcact gtatttgaat tactgcgaag gggagtatgt gaactctatg 1801 atctctaccc ccaatatatt aataagttac ctaagattta tcttagatat 1851 aacttattaa tagattgagt tgttgtagca tttactaatc aaattctgat 1901 aggtgaccgt cctagggcgg atggcatcag gctatttgac tactttgtag 1951 gtttggaggt aattcctcct ctcctacgca taatgctaca taccattaag 2001 aaagattgaa acggattatg aaattccatc aaatatacct tgaataaagg 2051 ttttgtggtc tctcaggttc gtgtaggtct gccagactgg actgaattat 2101 ttttgttgcc catactgcct tcaacctata tcattattag ggattattgt 2151 aggagtttta acgacctcac taagttattt ggtgagtgat gactattaag 2201 attcgaatct gaaagttatc aggtaagcat cttagatgtt atcgatcgtt 2251 tagctcatac atcaatacct aatcttgata tacatgataa gaagaaagtt 2301 aaattaactt tggataatct ttacaaatta agtttaattg taaatatccc 2351 aagcggaggt gcccgtcgtt atatagaatt tctccgattt aacggactta 2401 agtcgccgtt aattgtggag agatatataa aagacggaat ccgaatcgag 2451 aaaccactaa ctttgcaagg tttgcataga agcggtgata tccaattagg 2501 atttaaaatc tcctaacatg tactttagga ataaagtgca tgggtgtccc 2551 aggaatcgca atcgataaga tcgcgttggg ccctctggtt tgatcaccag 2601 cggcaccacc gttaaatcag gtgtctggat attacatccc gcagagagat 2651 acaattctct gacggcatat cataaatagt ttcaaactac cctttggtat 2701 tgccactgag gctttaggcc tcaatggg