Sequence of DPV Saccharomyces cerevisiae virus L-BC (La)
Saccharomyces cerevisiae virus La, complete genome.
ACC No: U01060
Dated: 2000-03-04 | Length: 4615 | CRC: -1743262122
!!NA_SEQUENCE 1.0
ID SCU01060 standard; RNA; VRL; 4615 BP.
XX
AC U01060;
XX
SV U01060.1
XX
DT 13-DEC-1994 (Rel. 42, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 6)
XX
DE Saccharomyces cerevisiae virus La, complete genome.
XX
KW .
XX
OS Saccharomyces cerevisiae virus La
OC Viruses; dsRNA viruses; Totiviridae; Totivirus.
XX
RN [1]
RP 1-4615
RX MEDLINE; 94111988.
RA Bruenn J.A.;
RT "A closely related group of RNA-dependent RNA polymerases from
RT double-stranded RNA viruses";
RL Nucleic Acids Res. 21(24):5667-5669(1993).
XX
RN [2]
RP 1-4615
RX MEDLINE; 96182949.
RA Park C.M., Lopinski J.D., Masuda J., Tzeng T.H., Bruenn J.A.;
RT "A second double-stranded RNA virus from yeast";
RL Virology 216(2):451-454(1996).
XX
RN [3]
RP 1-4615
RA Bruenn J.A.;
RT ;
RL Submitted (25-AUG-1993) to the EMBL/GenBank/DDBJ databases.
RL Jeremy A. Bruenn, Biological Sciences, State University of New York at
RL Buffalo, SUNY/Buffalo, Buffalo, NY 14260, USA
XX
DR SPTREMBL; Q87026; Q87026.
DR SPTREMBL; Q87027; Q87027.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4615
FT /db_xref="taxon:42478"
FT /note="Saccharomyces cerevisiae virus ScV-La"
FT /organism="Saccharomyces cerevisiae virus La"
FT /specific_host="Saccharomyces cerevisiae"
FT /lab_host="Saccharomyces cerevisiae"
FT CDS 24. .2117
FT /codon_start=1
FT /db_xref="SPTREMBL:Q87026"
FT /gene="cap"
FT /product="capsid"
FT /protein_id="AAB02145.1"
FT /translation="MSSLLNSLLPEYFKPKTNLNINSSRVQYGFNARIDMQYEDDSGTR
FT KGSRPNAFMSNTVAFIGNYEGIIVDDIPILDGLRADIFDTHGDLDMGLVEDALSKSTMI
FT RRNVPTYTAYASELLYKRNLTSLFYNMLRLYYIKKWGSIKYEKDAIFYDNGHACLLNRQ
FT LFPKSRDASLESSLSLPEAEIAMLDPGLEFPEEDVPAILWHGRVSSRATCILGQACSEF
FT APLAPFSIAHYSPQLTRKLFVNAPAGIEPSSGRYTHEDVKDAITILVSANQAYTDFEAA
FT YLMLAQTLVSPVPRTAEASAWFINAGMVNMPTLSCANGYYPALTNVNPYHRLDTWKDTL
FT NHWVAYPDMLFYHSVAMIESCYVELGNVARVSDSDAINKYTFTELSVQGRPVMNRGIIV
FT DLTLVAMRTGREISLPYPVSCGLTRTDALLQGTEIHVPVVVKDIDMPQYYNAIDKDVIE
FT GQETVIKVKQLPPAMYPIYTYGINTTEFYSDHFEDQVQVEMAPIDNGKAVFNDARKFSK
FT FMSIMRMMGNDVTATDLVTGRKVSNWADNSSGRFLYTDVKYEGQTAFLVDMDTVKARDH
FT CWVSIVDPNGTMNLSYKMTNFRAAMFSRNKPLYMTGGSVRTIATGNYRDAAERLRAMDE
FT TLRLKPFKITEKLDFRVAAYAIPSLSGSNMPSLHHQEQLQISEVDAEPINPIGEDELPP
FT DIE"
FT misc_feature 1970
FT /gene="cap"
FT /function="translational frameshift site"
FT CDS <1970. .4561
FT /codon_start=1
FT /db_xref="SPTREMBL:Q87027"
FT /gene="pol"
FT /product="RNA polymerase"
FT /protein_id="AAB02146.1"
FT /translation="FSCSSLRDTKFVGQQYAILTPSGTTTDIRSGRGTNQSYRRGRTST
FT GYRIGVEDDEDLDIGTVKYIVPLYLNGDNVAQNCLEATHVLIKACSIANRIVDDGEGHC
FT FTQQGLAQQWIFHRGEMIFVKAVRIGQLNAYYVDYKNVTNYSLKTAAQVGATISNNLRH
FT GFVDNQQDAYTRLVANYSDTRKWIRDNFTYNYNMEKEKYRITQYHHTHVRLKDLFPSRK
FT IVKLEGYEALLAMMLDRFNNIESTHVTFFTYLRALPDREKEVFISLVLNYNGLGREWLK
FT SEGVRAKQAQGTVKYDMSKLFELNVLENGVDEEVDWEKEKRNRSDIKTVNISYAKVLEH
FT CRELFIMARAEGKRPMRMKWQEYWRQRAVIMPGGSVHSQHPVEQDVIRVLPREIRSKKG
FT VASVMPYKEQKYFTSRRPEIHAYTSTKYEWGKVRALYGCDFSSHTMADFGLLQCEDTFP
FT GFVPTGSYANEDYVRTRIAGTHSLIPFCYDFDDFNSQHSKEAMQAVIDAWISVYHDKLT
FT DDQIEAAKWTRNSVDRMVAHQPNTGETYDVKGTLFSGWRLTTFFNTALNYCYLANAGIN
FT SLVPTSLHNGDDVFAGIRTIADGISLIKNAAATGVRANTTKMNIGTIAEFLRVDMRAKN
FT STGSQYLTRGIATFTHSRVESDAPLTLRNLVSAYKTRYDEILARGASIDNMKPLYRKQL
FT FFARKLFNVEKDIVDNLITMDISCGGLQEKGRVSEMVLQEVDIENIDSYRKTRMIAKLI
FT DKGVGDYTAFLKTNFSEIADAITRETRVESVTKAYNVKKKTVVRAFRDLSAAYHERAVR
FT HAWKGMSGLHIVNRIRMGVSNLVMVVSKINPAKANVLAKSGDPTKWLAVLT"
XX
SQ Sequence 4615 BP; 1431 A; 860 C; 1101 G; 1223 T; 0 other;
U01060 Length: 4615 December 21, 2001 15:57 Type: N Check: 6594 ..
1 gaatttttcg gtgaaccgga attatgtcgt ctctgttaaa ttcattacta
51 ccagaatatt ttaaacctaa aactaatttg aatatcaact cttctagggt
101 ccaatatggc tttaatgctc gcattgatat gcagtatgaa gacgatagtg
151 ggactagaaa aggctcaaga cccaatgcat ttatgtctaa cacagttgct
201 tttataggaa actatgaagg tattattgtt gatgacattc cgatattgga
251 tggtcttagg gccgacattt ttgatactca tggtgactta gacatgggcc
301 tcgttgagga tgcattgtct aagagtacca tgattagaag gaatgtacca
351 acttatactg cttacgcgag tgaattactg tataagagaa accttacatc
401 tctattttac aatatgctcc gtttatacta cattaaaaaa tggggcagta
451 ttaagtatga aaaagatgcc atcttttatg ataatggcca cgcctgtctt
501 ttaaacaggc aattgtttcc aaagtctcgt gatgcttctt tggaatcaag
551 cctctctttg cctgaggctg aaattgcaat gcttgatcct ggcctggaat
601 ttccagaaga ggatgtgcct gcaattttat ggcacggcag agtgtcatcc
651 agagcaacgt gtatcttagg gcaagcttgc tcagagttcg cgcctctggc
701 ccccttttcg attgcgcatt attcaccaca attgacgaga aaactatttg
751 tcaatgcgcc cgctgggatt gagcctagct ccgggcggta tactcacgag
801 gatgtaaaag atgcgattac gatccttgtg tctgcaaacc aggcttatac
851 tgactttgaa gcagcatact tgatgcttgc tcaaacgttg gtctcacctg
901 taccacgcac tgccgaagca agtgcatggt tcatcaatgc tggcatggtc
951 aatatgccaa ctttgtcatg tgcaaatggt tattatccag cactgaccaa
1001 tgtcaatcct taccaccggc tagacacatg gaaagatacg ttaaatcatt
1051 gggtggctta tcccgacatg ctgttttacc attcagtggc aatgattgag
1101 agctgctatg ttgaactcgg gaatgtggct cgtgtgtcag acagtgatgc
1151 aataaacaaa tacactttca ctgagctatc agtgcaagga cggcctgtta
1201 tgaatcgagg aattattgta gatctgacac ttgtggcaat gcgtactggt
1251 agggagatct cactacctta cccggtcagc tgtggcctga cccgtacaga
1301 cgcgttattg caaggtactg agattcacgt tccagttgtt gtcaaagata
1351 tcgacatgcc ccagtattac aacgcgattg ataaggatgt tattgagggg
1401 caggaaactg tgattaaagt gaaacagctg ccaccagcta tgtatccaat
1451 ttatacttac gggatcaaca ctactgaatt ctattctgac cattttgaag
1501 accaggtaca agttgaaatg gcaccaatcg ataatggaaa agcagttttt
1551 aacgatgcaa gaaagttttc gaaatttatg tccataatgc gcatgatggg
1601 gaatgatgtt actgctactg atttagttac aggtagaaaa gtgtcgaatt
1651 gggccgacaa ctcatcaggg cgtttcttgt acacggatgt gaagtatgaa
1701 ggacaaactg cctttttggt tgatatggat actgtcaagg cgagagacca
1751 ctgttgggtg tcaattgttg atcctaatgg tacaatgaac ttgtcatata
1801 agatgaccaa ttttagagca gcaatgtttt ctagaaacaa gcccttgtat
1851 atgacagggg ggtcagtcag gaccatagct actggcaatt atcgagatgc
1901 tgctgaaaga ttacgtgcaa tggatgaaac gctcagatta aaacctttta
1951 agattactga gaagttggat tttcgtgtag cagcttacgc gataccaagt
2001 ttgtcgggca gcaatatgcc atccttacac catcaggaac aactacagat
2051 atcagaagtg gacgcggaac caatcaatcc tataggagag gacgaacttc
2101 caccggatat agaataggtg tcgaagacga tgaggactta gatattggta
2151 cggtcaaata cattgtgcca ttgtatttga acggtgataa tgtggcacaa
2201 aattgtttag aagcaacaca cgtgcttatc aaagcttgta gtattgcgaa
2251 ccggattgta gatgacggag agggtcactg tttcacacag caagggctgg
2301 cgcagcagtg gatcttccat aggggggaga tgatatttgt gaaggcggta
2351 cgcattggtc aactcaatgc atattatgta gactataaga acgtcacaaa
2401 ttatagtctt aaaaccgctg ctcaagtagg agcgacgata tcaaataact
2451 tacgccacgg atttgttgac aatcaacaag acgcatacac gcgcttggtt
2501 gccaactact ctgatacgcg gaagtggata cgtgacaatt ttacatataa
2551 ttataatatg gagaaagaaa agtataggat aacccaatac caccatacac
2601 atgtgaggtt gaaagatttg tttccatcca ggaaaatagt taaactagag
2651 ggatatgaag ccttgttggc aatgatgcta gacaggttta acaacataga
2701 gtcaacacat gtaactttct tcacatattt aagagcacta cctgaccgtg
2751 aaaaagaagt ctttattagc ttagtcttaa actataatgg ccttggcaga
2801 gagtggttga agtctgaagg tgttagggct aaacaagcac aaggtactgt
2851 gaaatacgat atgagtaaac tatttgaact gaatgtacta gagaacggag
2901 ttgacgaaga agttgactgg gagaaagaga aacgcaacag gtcagatatc
2951 aagactgtta acataagtta tgcaaaagtt ctcgaacatt gtagagagct
3001 attcatcatg gcgagggccg aagggaaacg gccaatgagg atgaaatggc
3051 aagagtactg gaggcagaga gcagttatca tgccaggtgg atcggtccac
3101 agtcaacatc cagtcgaaca ggacgtgatt agagtattac ccagagaaat
3151 cagaagtaag aagggggtgg caagtgtcat gccatacaaa gaacagaagt
3201 atttcacgtc cagaaggccg gaaatacacg cttacacttc aacgaaatac
3251 gagtggggaa aagtgagggc actatatggg tgtgattttt catcacatac
3301 aatggctgat tttggattgt tacaatgcga ggatacattc ccgggctttg
3351 taccaacagg gtcttacgcc aatgaggatt atgtcaggac cagaattgct
3401 gggactcact cattgatccc tttctgttac gatttcgatg atttcaacag
3451 ccaacattca aaggaagcca tgcaagcagt gattgatgca tggatatctg
3501 tctatcacga taagttaaca gatgaccaga tagaggcggc aaagtggaca
3551 cgaaactcgg tagatagaat ggtcgctcac caacctaaca ctggtgagac
3601 ttatgatgtt aaagggacac tgtttagtgg ctggcgatta acaacatttt
3651 tcaatacggc gttgaactat tgctacctgg ctaatgcagg tataaactca
3701 ctagtgccaa cgagtctcca taatggtgat gatgtttttg cagggataag
3751 gacaatagct gacggtattt ctttgatcaa aaacgccgca gccacgggag
3801 ttcgcgctaa tacaactaaa atgaacattg gtacgatagc agagtttttg
3851 agagttgata tgcgtgcaaa aaatagtact ggcagtcagt atttaacaag
3901 agggattgct accttcacgc acagtagggt tgagtctgat gcaccactga
3951 cattgcgcaa tctagtatct gcttacaaaa ccagatatga cgagatttta
4001 gctcgtggcg caagcatcga taacatgaag ccactctatc gtaagcaatt
4051 attttttgct agaaagttgt tcaatgtcga gaaggacatt gttgacaatc
4101 tgataacgat ggacatatca tgtggcggtt tgcaagaaaa gggtagggta
4151 tcagagatgg tgttacagga ggttgacatt gagaatatag atagttatag
4201 gaagacaagg atgatcgcca aactgattga caagggggtt ggcgattata
4251 ctgcattcct gaaaactaac ttttccgaga tagctgatgc tatcacaaga
4301 gagacacgtg tagagtcagt gaccaaggct tataatgtta agaagaaaac
4351 ggtcgtacgc gcgtttaggg acctaagcgc agcatatcat gaaagagcgg
4401 tgagacatgc ttggaagggg atgagtggac tacacatagt caacaggatt
4451 cgtatgggag tgagcaactt agtaatggtt gttagcaaaa tcaatcctgc
4501 aaaagctaat gtgctagcca aatcaggaga tcctacaaaa tggcttgcag
4551 tccttacatg atatacaggc aaccacataa gacctgagaa caaagagtac
4601 atacgatact acgca