Sequence of DPV Saccharomyces cerevisiae virus L-BC (La)
Saccharomyces cerevisiae virus La, complete genome.
ACC No: U01060
Dated: 2000-03-04 | Length: 4615 | CRC: -1743262122
!!NA_SEQUENCE 1.0 ID SCU01060 standard; RNA; VRL; 4615 BP. XX AC U01060; XX SV U01060.1 XX DT 13-DEC-1994 (Rel. 42, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 6) XX DE Saccharomyces cerevisiae virus La, complete genome. XX KW . XX OS Saccharomyces cerevisiae virus La OC Viruses; dsRNA viruses; Totiviridae; Totivirus. XX RN [1] RP 1-4615 RX MEDLINE; 94111988. RA Bruenn J.A.; RT "A closely related group of RNA-dependent RNA polymerases from RT double-stranded RNA viruses"; RL Nucleic Acids Res. 21(24):5667-5669(1993). XX RN [2] RP 1-4615 RX MEDLINE; 96182949. RA Park C.M., Lopinski J.D., Masuda J., Tzeng T.H., Bruenn J.A.; RT "A second double-stranded RNA virus from yeast"; RL Virology 216(2):451-454(1996). XX RN [3] RP 1-4615 RA Bruenn J.A.; RT ; RL Submitted (25-AUG-1993) to the EMBL/GenBank/DDBJ databases. RL Jeremy A. Bruenn, Biological Sciences, State University of New York at RL Buffalo, SUNY/Buffalo, Buffalo, NY 14260, USA XX DR SPTREMBL; Q87026; Q87026. DR SPTREMBL; Q87027; Q87027. XX FH Key Location/Qualifiers FH FT source 1. .4615 FT /db_xref="taxon:42478" FT /note="Saccharomyces cerevisiae virus ScV-La" FT /organism="Saccharomyces cerevisiae virus La" FT /specific_host="Saccharomyces cerevisiae" FT /lab_host="Saccharomyces cerevisiae" FT CDS 24. .2117 FT /codon_start=1 FT /db_xref="SPTREMBL:Q87026" FT /gene="cap" FT /product="capsid" FT /protein_id="AAB02145.1" FT /translation="MSSLLNSLLPEYFKPKTNLNINSSRVQYGFNARIDMQYEDDSGTR FT KGSRPNAFMSNTVAFIGNYEGIIVDDIPILDGLRADIFDTHGDLDMGLVEDALSKSTMI FT RRNVPTYTAYASELLYKRNLTSLFYNMLRLYYIKKWGSIKYEKDAIFYDNGHACLLNRQ FT LFPKSRDASLESSLSLPEAEIAMLDPGLEFPEEDVPAILWHGRVSSRATCILGQACSEF FT APLAPFSIAHYSPQLTRKLFVNAPAGIEPSSGRYTHEDVKDAITILVSANQAYTDFEAA FT YLMLAQTLVSPVPRTAEASAWFINAGMVNMPTLSCANGYYPALTNVNPYHRLDTWKDTL FT NHWVAYPDMLFYHSVAMIESCYVELGNVARVSDSDAINKYTFTELSVQGRPVMNRGIIV FT DLTLVAMRTGREISLPYPVSCGLTRTDALLQGTEIHVPVVVKDIDMPQYYNAIDKDVIE FT GQETVIKVKQLPPAMYPIYTYGINTTEFYSDHFEDQVQVEMAPIDNGKAVFNDARKFSK FT FMSIMRMMGNDVTATDLVTGRKVSNWADNSSGRFLYTDVKYEGQTAFLVDMDTVKARDH FT CWVSIVDPNGTMNLSYKMTNFRAAMFSRNKPLYMTGGSVRTIATGNYRDAAERLRAMDE FT TLRLKPFKITEKLDFRVAAYAIPSLSGSNMPSLHHQEQLQISEVDAEPINPIGEDELPP FT DIE" FT misc_feature 1970 FT /gene="cap" FT /function="translational frameshift site" FT CDS <1970. .4561 FT /codon_start=1 FT /db_xref="SPTREMBL:Q87027" FT /gene="pol" FT /product="RNA polymerase" FT /protein_id="AAB02146.1" FT /translation="FSCSSLRDTKFVGQQYAILTPSGTTTDIRSGRGTNQSYRRGRTST FT GYRIGVEDDEDLDIGTVKYIVPLYLNGDNVAQNCLEATHVLIKACSIANRIVDDGEGHC FT FTQQGLAQQWIFHRGEMIFVKAVRIGQLNAYYVDYKNVTNYSLKTAAQVGATISNNLRH FT GFVDNQQDAYTRLVANYSDTRKWIRDNFTYNYNMEKEKYRITQYHHTHVRLKDLFPSRK FT IVKLEGYEALLAMMLDRFNNIESTHVTFFTYLRALPDREKEVFISLVLNYNGLGREWLK FT SEGVRAKQAQGTVKYDMSKLFELNVLENGVDEEVDWEKEKRNRSDIKTVNISYAKVLEH FT CRELFIMARAEGKRPMRMKWQEYWRQRAVIMPGGSVHSQHPVEQDVIRVLPREIRSKKG FT VASVMPYKEQKYFTSRRPEIHAYTSTKYEWGKVRALYGCDFSSHTMADFGLLQCEDTFP FT GFVPTGSYANEDYVRTRIAGTHSLIPFCYDFDDFNSQHSKEAMQAVIDAWISVYHDKLT FT DDQIEAAKWTRNSVDRMVAHQPNTGETYDVKGTLFSGWRLTTFFNTALNYCYLANAGIN FT SLVPTSLHNGDDVFAGIRTIADGISLIKNAAATGVRANTTKMNIGTIAEFLRVDMRAKN FT STGSQYLTRGIATFTHSRVESDAPLTLRNLVSAYKTRYDEILARGASIDNMKPLYRKQL FT FFARKLFNVEKDIVDNLITMDISCGGLQEKGRVSEMVLQEVDIENIDSYRKTRMIAKLI FT DKGVGDYTAFLKTNFSEIADAITRETRVESVTKAYNVKKKTVVRAFRDLSAAYHERAVR FT HAWKGMSGLHIVNRIRMGVSNLVMVVSKINPAKANVLAKSGDPTKWLAVLT" XX SQ Sequence 4615 BP; 1431 A; 860 C; 1101 G; 1223 T; 0 other; U01060 Length: 4615 December 21, 2001 15:57 Type: N Check: 6594 .. 1 gaatttttcg gtgaaccgga attatgtcgt ctctgttaaa ttcattacta 51 ccagaatatt ttaaacctaa aactaatttg aatatcaact cttctagggt 101 ccaatatggc tttaatgctc gcattgatat gcagtatgaa gacgatagtg 151 ggactagaaa aggctcaaga cccaatgcat ttatgtctaa cacagttgct 201 tttataggaa actatgaagg tattattgtt gatgacattc cgatattgga 251 tggtcttagg gccgacattt ttgatactca tggtgactta gacatgggcc 301 tcgttgagga tgcattgtct aagagtacca tgattagaag gaatgtacca 351 acttatactg cttacgcgag tgaattactg tataagagaa accttacatc 401 tctattttac aatatgctcc gtttatacta cattaaaaaa tggggcagta 451 ttaagtatga aaaagatgcc atcttttatg ataatggcca cgcctgtctt 501 ttaaacaggc aattgtttcc aaagtctcgt gatgcttctt tggaatcaag 551 cctctctttg cctgaggctg aaattgcaat gcttgatcct ggcctggaat 601 ttccagaaga ggatgtgcct gcaattttat ggcacggcag agtgtcatcc 651 agagcaacgt gtatcttagg gcaagcttgc tcagagttcg cgcctctggc 701 ccccttttcg attgcgcatt attcaccaca attgacgaga aaactatttg 751 tcaatgcgcc cgctgggatt gagcctagct ccgggcggta tactcacgag 801 gatgtaaaag atgcgattac gatccttgtg tctgcaaacc aggcttatac 851 tgactttgaa gcagcatact tgatgcttgc tcaaacgttg gtctcacctg 901 taccacgcac tgccgaagca agtgcatggt tcatcaatgc tggcatggtc 951 aatatgccaa ctttgtcatg tgcaaatggt tattatccag cactgaccaa 1001 tgtcaatcct taccaccggc tagacacatg gaaagatacg ttaaatcatt 1051 gggtggctta tcccgacatg ctgttttacc attcagtggc aatgattgag 1101 agctgctatg ttgaactcgg gaatgtggct cgtgtgtcag acagtgatgc 1151 aataaacaaa tacactttca ctgagctatc agtgcaagga cggcctgtta 1201 tgaatcgagg aattattgta gatctgacac ttgtggcaat gcgtactggt 1251 agggagatct cactacctta cccggtcagc tgtggcctga cccgtacaga 1301 cgcgttattg caaggtactg agattcacgt tccagttgtt gtcaaagata 1351 tcgacatgcc ccagtattac aacgcgattg ataaggatgt tattgagggg 1401 caggaaactg tgattaaagt gaaacagctg ccaccagcta tgtatccaat 1451 ttatacttac gggatcaaca ctactgaatt ctattctgac cattttgaag 1501 accaggtaca agttgaaatg gcaccaatcg ataatggaaa agcagttttt 1551 aacgatgcaa gaaagttttc gaaatttatg tccataatgc gcatgatggg 1601 gaatgatgtt actgctactg atttagttac aggtagaaaa gtgtcgaatt 1651 gggccgacaa ctcatcaggg cgtttcttgt acacggatgt gaagtatgaa 1701 ggacaaactg cctttttggt tgatatggat actgtcaagg cgagagacca 1751 ctgttgggtg tcaattgttg atcctaatgg tacaatgaac ttgtcatata 1801 agatgaccaa ttttagagca gcaatgtttt ctagaaacaa gcccttgtat 1851 atgacagggg ggtcagtcag gaccatagct actggcaatt atcgagatgc 1901 tgctgaaaga ttacgtgcaa tggatgaaac gctcagatta aaacctttta 1951 agattactga gaagttggat tttcgtgtag cagcttacgc gataccaagt 2001 ttgtcgggca gcaatatgcc atccttacac catcaggaac aactacagat 2051 atcagaagtg gacgcggaac caatcaatcc tataggagag gacgaacttc 2101 caccggatat agaataggtg tcgaagacga tgaggactta gatattggta 2151 cggtcaaata cattgtgcca ttgtatttga acggtgataa tgtggcacaa 2201 aattgtttag aagcaacaca cgtgcttatc aaagcttgta gtattgcgaa 2251 ccggattgta gatgacggag agggtcactg tttcacacag caagggctgg 2301 cgcagcagtg gatcttccat aggggggaga tgatatttgt gaaggcggta 2351 cgcattggtc aactcaatgc atattatgta gactataaga acgtcacaaa 2401 ttatagtctt aaaaccgctg ctcaagtagg agcgacgata tcaaataact 2451 tacgccacgg atttgttgac aatcaacaag acgcatacac gcgcttggtt 2501 gccaactact ctgatacgcg gaagtggata cgtgacaatt ttacatataa 2551 ttataatatg gagaaagaaa agtataggat aacccaatac caccatacac 2601 atgtgaggtt gaaagatttg tttccatcca ggaaaatagt taaactagag 2651 ggatatgaag ccttgttggc aatgatgcta gacaggttta acaacataga 2701 gtcaacacat gtaactttct tcacatattt aagagcacta cctgaccgtg 2751 aaaaagaagt ctttattagc ttagtcttaa actataatgg ccttggcaga 2801 gagtggttga agtctgaagg tgttagggct aaacaagcac aaggtactgt 2851 gaaatacgat atgagtaaac tatttgaact gaatgtacta gagaacggag 2901 ttgacgaaga agttgactgg gagaaagaga aacgcaacag gtcagatatc 2951 aagactgtta acataagtta tgcaaaagtt ctcgaacatt gtagagagct 3001 attcatcatg gcgagggccg aagggaaacg gccaatgagg atgaaatggc 3051 aagagtactg gaggcagaga gcagttatca tgccaggtgg atcggtccac 3101 agtcaacatc cagtcgaaca ggacgtgatt agagtattac ccagagaaat 3151 cagaagtaag aagggggtgg caagtgtcat gccatacaaa gaacagaagt 3201 atttcacgtc cagaaggccg gaaatacacg cttacacttc aacgaaatac 3251 gagtggggaa aagtgagggc actatatggg tgtgattttt catcacatac 3301 aatggctgat tttggattgt tacaatgcga ggatacattc ccgggctttg 3351 taccaacagg gtcttacgcc aatgaggatt atgtcaggac cagaattgct 3401 gggactcact cattgatccc tttctgttac gatttcgatg atttcaacag 3451 ccaacattca aaggaagcca tgcaagcagt gattgatgca tggatatctg 3501 tctatcacga taagttaaca gatgaccaga tagaggcggc aaagtggaca 3551 cgaaactcgg tagatagaat ggtcgctcac caacctaaca ctggtgagac 3601 ttatgatgtt aaagggacac tgtttagtgg ctggcgatta acaacatttt 3651 tcaatacggc gttgaactat tgctacctgg ctaatgcagg tataaactca 3701 ctagtgccaa cgagtctcca taatggtgat gatgtttttg cagggataag 3751 gacaatagct gacggtattt ctttgatcaa aaacgccgca gccacgggag 3801 ttcgcgctaa tacaactaaa atgaacattg gtacgatagc agagtttttg 3851 agagttgata tgcgtgcaaa aaatagtact ggcagtcagt atttaacaag 3901 agggattgct accttcacgc acagtagggt tgagtctgat gcaccactga 3951 cattgcgcaa tctagtatct gcttacaaaa ccagatatga cgagatttta 4001 gctcgtggcg caagcatcga taacatgaag ccactctatc gtaagcaatt 4051 attttttgct agaaagttgt tcaatgtcga gaaggacatt gttgacaatc 4101 tgataacgat ggacatatca tgtggcggtt tgcaagaaaa gggtagggta 4151 tcagagatgg tgttacagga ggttgacatt gagaatatag atagttatag 4201 gaagacaagg atgatcgcca aactgattga caagggggtt ggcgattata 4251 ctgcattcct gaaaactaac ttttccgaga tagctgatgc tatcacaaga 4301 gagacacgtg tagagtcagt gaccaaggct tataatgtta agaagaaaac 4351 ggtcgtacgc gcgtttaggg acctaagcgc agcatatcat gaaagagcgg 4401 tgagacatgc ttggaagggg atgagtggac tacacatagt caacaggatt 4451 cgtatgggag tgagcaactt agtaatggtt gttagcaaaa tcaatcctgc 4501 aaaagctaat gtgctagcca aatcaggaga tcctacaaaa tggcttgcag 4551 tccttacatg atatacaggc aaccacataa gacctgagaa caaagagtac 4601 atacgatact acgca