Sequence of DPV Rhizoctonia virus M2
Thanatephorus cucumeris mitochondrial virus-like double-stranded RNA element dsRNA viral RNA-dependent RNA polymerase gene, complete cds.
ACC No: U51331
Dated: 2000-06-03 | Length: 3570 | CRC: -2056513447
!!NA_SEQUENCE 1.0 ID MITCCU513 standard; RNA; ORG; 3570 BP. XX AC U51331; XX SV U51331.2 XX DT 03-AUG-1996 (Rel. 48, Created) DT 03-JUN-2000 (Rel. 63, Last updated, Version 6) XX DE Thanatephorus cucumeris mitochondrial virus-like double-stranded RNA DE element dsRNA viral RNA-dependent RNA polymerase gene, complete cds. XX KW . XX OS Thanatephorus cucumeris OC Eukaryota; Fungi; Basidiomycota; Hymenomycetes; Heterobasidiomycetes; OC Heterobasidiomycetidae; Ceratobasidiales; Ceratobasidiaceae; Thanatephorus. OG Mitochondrion XX RN [1] RA Lakshman D.K., Tavantzis S.M.; RT "Spontaneous appearance of genetically distinct double-stranded RNA RT elements in Rhizoctonia solani"; RL Phytopathology 84:633-639(1994). XX RN [2] RP 1-3570 RX MEDLINE; 98263373. RA Lakshman D.K., Jian J., Tavantzis S.M.; RT "A double-stranded RNA element from a hypovirulent strain of Rhizoctonia RT solani occurs in DNA form and is genetically related to the pentafunctional RT AROM protein of the shikimate pathway"; RL Proc. Natl. Acad. Sci. U.S.A. 95(11):6425-6429(1998). XX RN [3] RP 1-3570 RA Lakshman D.K.; RT ; RL Submitted (13-MAR-1996) to the EMBL/GenBank/DDBJ databases. RL Dilip K. Lakshman, University of Maine, Plant Biology and Pathology, RL 5722-Deering Hall, Orono, ME 04469-5722, USA XX RN [4] RC Sequence update by submitter RP 1-3570 RA Lakshman D.K.; RT ; RL Submitted (04-MAR-1999) to the EMBL/GenBank/DDBJ databases. RL Dilip K. Lakshman, University of Maine, Plant Biology and Pathology, RL 5722-Deering Hall, Orono, ME 04469-5722, USA XX DR SPTREMBL; Q9ZXZ7; Q9ZXZ7. XX CC On Mar 4, 1999 this sequence version replaced gi:1469944. XX FH Key Location/Qualifiers FH FT source 1. .3570 FT /db_xref="taxon:118239" FT /note="anamorph=Rhizoctonia solani; black scurf of potato" FT /organelle="mitochondrion" FT /organism="Thanatephorus cucumeris" FT /isolate="anastomosis group 3, Rhs 1A1" FT /tissue_type="mycelium" FT misc_RNA 1. .3570 FT /note="virus-like double-stranded RNA element" FT CDS 422. .2686 FT /codon_start=1 FT /db_xref="SPTREMBL:Q9ZXZ7" FT /transl_table=4 FT /product="dsRNA viral RNA-dependent RNA polymerase" FT /protein_id="AAD17381.1" FT /translation="MLLLAYKYSSFYCNRQPACNTNMNKTNLNQKGINLLALLSTKYVE FT VSKMIPLSDKIGTTLFKPLGYNNMLSHGRIGRLASGIRKTNFFISFTLNMWRTHGTTFT FT IKWLKGCSVAIQKCLGKDILKSLRVLTPDLPLNGLSRGLPRIIPVEDRVKIRRGHVPTI FT RFWLGLFNLYRVLKAPSELKLGTITNKFTGDRDGLRALMRFALKFNPFVEFNKLDKKSL FT APTKFIMSRSASPSNKVSWFGILTDTRLLREGSPRLWENIQAYLTMVGADQFRFDLDYA FT CSLADRLKSFDDKVDSQGQWIRQVSKSGQVLTQVDSMKSKDSIRGHGIGPGLGLSQFAL FT KEEAAGKIRLFALMDSITQSVMSPLHDYMFAILRNIPNDGTFDQEASIARSQEKAVTAG FT KAFSYDLTAATDRLPVILTAFILSTIVGIRTFGGLWRSILVKRPFGFNSNVAEKLKVSD FT GPYFYEVGQPMGALSSWPGLALTHHWIVQVAAFRVTNSKSWNTEYEILGDDIVIFNELI FT AQEYLNIMAVIGCEINLNKSISSRCRPVFEFAKRTCWGFAIVSGISLAQIRAGWRIGGR FT VANALQFARAGLLEPGESLLQAILSRNTFSKGRVLPGYKTESVTSQKALALGVLALLGE FT RFRSGIIPLRTVMHAIIDPISKNLDLKGDAIAIPIKASLHAAYQALVEGDKPQLYPFSK FT EWNREPKFLENEDKLASRLLHSALNKVIILRDQYNWFIAENASEMYFPLSYLNNSSAKY FT L" XX SQ Sequence 3570 BP; 1052 A; 746 C; 798 G; 974 T; 0 other; U51331 Length: 3570 December 21, 2001 15:59 Type: N Check: 396 .. 1 tggggcttct gtccaattaa ggactcagct aatccacacc ctctggttaa 51 taccagaatt cgtggagctg aagaaagatt ggatagttgc ttagggaaac 101 gtggaggttc tattacgtga gtaatacgac ccattcactt agtacggctt 151 gctctatccg ggtgcgattt gctagttctg aaaaggacga cacaaccctc 201 tgagatagaa agctaatggc gaacaagtat ctactacccc gcaagggacg 251 attagaagct tagtagcctc cgcacatcct acgggataaa acttgctgca 301 ttagtaagag aatatttaga agcgagtagg cagaaggtta ataaaccttg 351 ctaccttcgg gtagaaaagg aatcctgttc ggaactccag ttcaggaccc 401 gccatcatca ttaatacggt gatgttactg cttgcctata agtattcttc 451 tttctactgt aaccgtcagc cggcctgtaa tactaatatg aacaaaacaa 501 acttaaacca aaaagggata aatctgttgg ctctattaag tactaagtac 551 gtggaggttt ctaaaatgat accgctttcc gataaaatcg gaactacact 601 attcaaacca ttgggataca ataacatgtt atctcatggt agaataggta 651 gattggcaag tgggataaga aaaacgaatt tctttataag ctttacactg 701 aacatgtgga gaacacacgg gacaaccttt accataaaat ggttgaaagg 751 atgctccgtg gctatccaaa aatgtctagg taaagatata ttgaaatctc 801 taagagtctt gacaccagat cttcctttga atgggttgtc acgtggactt 851 ccaagaatta tacctgttga agacagagta aaaattcgaa gaggacacgt 901 accaacaatc cgattctggc tcgggttatt taacctttac cgggtgctaa 951 aagcgcccag cgagctgaaa ttgggaacca ttactaataa atttactggg 1001 gatagagatg ggttacgagc tttgatgcga tttgcattga agttcaaccc 1051 tttcgtcgaa tttaataaat tagacaaaaa gtctctagct cccactaagt 1101 ttattatgtc tagatcggct tcgccgtcta acaaagtgtc ttggtttggg 1151 atcttaacag atacccgact tcttagagaa ggatctccca gattatggga 1201 aaacatccaa gcttacctaa ccatggtagg ggcagaccag ttcagatttg 1251 atctggatta tgcttgctct cttgcagatc gacttaaatc atttgatgat 1301 aaagttgatt cgcagggtca atggataaga caagtctcga aatcgggaca 1351 agttcttact caagttgact caatgaaatc gaaagattcc attagaggtc 1401 atggtattgg tcctggactt ggtctttcgc aatttgcgct caaagaagaa 1451 gctgctggaa aaatccggct cttcgctttg atggattcaa taacacaaag 1501 tgttatgagt cctctccatg attacatgtt tgccatctta aggaatattc 1551 ctaacgatgg gacatttgat caagaggcat caattgctag atcccaagaa 1601 aaggccgtta ccgcgggcaa ggcattcagt tatgatctga ctgctgctac 1651 ggatcgacta cctgtaatcc ttactgcgtt catactctcc acaatcgtgg 1701 ggattagaac gtttgggggt ctttggaggt caattttggt caaaagacct 1751 tttggtttca acagcaatgt tgctgagaaa ttgaaagtct ctgacggtcc 1801 gtacttctac gaggtagggc aacctatggg tgctctatct tcttggcccg 1851 gtcttgcctt aacgcatcac tggattgtcc aagttgccgc ttttagagtt 1901 acaaattcta agagttggaa caccgagtat gaaatacttg gtgatgatat 1951 cgtaatattc aatgaactta tcgctcaaga atatctaaat atcatggctg 2001 taatcgggtg tgagattaat ttaaataaat caatctcctc ccgatgccgt 2051 cccgttttcg aattcgcaaa acgaacctgt tggggctttg caatagtaag 2101 tggaatctcc ctcgctcaaa taagagcggg ttggagaatc gggggtcgtg 2151 tagctaatgc tctgcaattt gcaagagcag gactactaga acccggtgaa 2201 tccctgttgc aagctatcct ttctagaaat accttttcaa aaggtagagt 2251 attgccaggt tacaagacgg agtcagtaac ctcacaaaag gctctagcct 2301 taggggtact ggcgttgtta ggggagagat tccgatctgg aatcatcccg 2351 ctaagaacgg taatgcacgc gatcatagat cctatttcta agaatctaga 2401 tctgaaaggg gatgctatcg ctatccctat caaagcgtca ttacatgcag 2451 cttaccaggc attggtggaa ggagataaac ctcagctcta cccattctca 2501 aaagaatgga atagagagcc aaagttcctc gagaatgaag acaaactggc 2551 gagccggttg cttcattccg cacttaataa agtgatcata ctccgagacc 2601 aatacaattg gtttatcgcg gaaaacgcgt cggagatgta ctttccctta 2651 agttatttaa ataactcaag tgcgaagtac ctctaaacga tctaccaggg 2701 ccatacttag ccctagtgac cgagattgag caattcttcg aaatgctaat 2751 cggtttagag atgaactgga cagatagtcc agaggctata taccaagacc 2801 tatatatgga aatggatgcc acactttatt atgaggaggc ccttgagctt 2851 cacgaaaggg ttgataaact cgagtttaaa cttaaacctt atgaaggtaa 2901 agtcaaaccc gggcggaccg tccacgagac tgcaccaata cttactgctt 2951 tacgcggtat tcttggtacg agtcttcgta gatggaacaa ccctcctaac 3001 ccatcaacta ttagtacatt gatgcgttag gcgtggcagg attctcccgc 3051 ctgtttaatc agatgaaagg ctcctcaata gagagaccga cccctagggg 3101 acgactctac gatgaagatt ctctattatc tacttcttga cacttcgagc 3151 agtctttgtt aagtttatta acaataaaaa ccatgccctt aggtccgggt 3201 gaaataccgg gaaaccatgg gggatagttc ttatcaaaga actccaagaa 3251 acggaagaag tgataaagtg atccaactcg cataaaatct atgcgcatcg 3301 gcctgaccaa gggcactggg tgttatacca ggtaacttgg aaggggaccg 3351 acggtgtgga aacctttcta tccgattcat cgggtggact tcttattttt 3401 acaaaccaga gtggttcact gaagaaccct tctcggctta gtactaacga 3451 ggcttctctt tacagattag cgcagttagg actaatgtcc gatcttaacc 3501 tccataaaag gagacttcgg tcttcgggtt tggatttggt taggcggaat 3551 ttctttccgc cagaagcccc