Sequence of DPV Tobacco rattle virus

Tobacco rattle virus 16 kDa protein gene, partial cds.

ACC No: U63727

Dated: 2000-03-04 | Length: 463 | CRC: 564298540

                !!NA_SEQUENCE 1.0
ID   TRU63727   standard; genomic RNA; VRL; 463 BP.
XX
AC   U63727;
XX
SV   U63727.1
XX
DT   19-MAR-1997 (Rel. 51, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Tobacco rattle virus 16 kDa protein gene, partial cds.
XX
KW   .
XX
OS   Tobacco rattle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tobravirus.
XX
RN   [1]
RC   Sequence of the 16 kDa open reading frame from RNA1
RP   1-463
RA   Kawchuk L.M., Lynch D.R., Leggett F.L, Howard R.J., McDonald J.G.;
RT   "Characterization of a Canadian Tobacco Rattle Virus Isolate";
RL   Unpublished.
XX
RN   [2]
RP   1-463
RA   Kawchuk L.M.;
RT   ;
RL   Submitted (12-JUL-1996) to the EMBL/GenBank/DDBJ databases.
RL   Agriculture and Agri-Food Canada, Lethbridge Research Centre, P.O. Box
RL   3000, Lethbridge, Alberta T1J 4B1, Canada
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .463
FT                   /db_xref="taxon:12295"
FT                   /mol_type="genomic RNA"
FT                   /organism="Tobacco rattle virus"
FT                   /isolate="Canadian (CAN)"
FT                   /map="RNA1"
FT   CDS             <1. .424
FT                   /codon_start=2
FT                   /db_xref="InterPro:IPR007968"
FT                   /db_xref="UniProtKB/TrEMBL:P89914"
FT                   /product="16 kDa protein"
FT                   /protein_id="AAB48382.1"
FT                   /translation="TCVLKGCVNEVTVLGHETCSIGHANKLRKQVADMVGVTRRCAENN
FT                   CGWFVCVIVNDFTFDVYNCCCRSHLEKCRKRIEARNREIWKQIERIRAEKTFATVKKSR
FT                   NSKPSKKKFKERKEFGTPKRFLRDDVPLGIDQLFAF"
XX
SQ   Sequence 463 BP; 135 A; 61 C; 116 G; 151 T; 0 other;

 U63727  Length: 463  December 20, 2005 16:49  Type: N  Check: 7217  ..

       1  gacgtgtgta ctcaagggtt gtgtgaatga agtcactgtt cttggtcacg
      51  agacgtgtag tatcggtcat gctaacaagt tgcgaaagca agttgccgac
     101  atggttggtg tcacacgtag gtgtgcggaa aataattgtg gatggtttgt
     151  ctgtgttatt gttaacgatt ttacttttga tgtgtataat tgttgttgcc
     201  gtagtcacct tgaaaagtgt cgtaaacgta ttgaagcgag gaatcgagaa
     251  atctggaaac agattgaacg aattcgagct gaaaagacgt ttgctacggt
     301  taaaaagtcc cgaaattcga aaccctctaa gaagaaattc aaagagagaa
     351  aagagtttgg gacaccaaaa agatttttaa gagatgatgt tccgttagga
     401  attgatcaat tgtttgcttt ttgattttat tttatattgt tatctgtttc
     451  tgtgtataga ctg