Sequence of DPV Beet soil-borne virus
Beet soil-borne virus 19K and 104K protein genes, complete cds.
ACC No: U64512
Dated: 2000-03-04 | Length: 3454 | CRC: 1558453996
!!NA_SEQUENCE 1.0
ID BSU64512 standard; RNA; VRL; 3454 BP.
XX
AC U64512;
XX
SV U64512.1
XX
DT 16-FEB-1997 (Rel. 50, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE Beet soil-borne virus 19K and 104K protein genes, complete cds.
XX
KW .
XX
OS beet soil-borne virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Furovirus.
XX
RN [1]
RP 1-3454
RX MEDLINE; 97170767.
RA Koenig R., Commandeur U., Loss S., Beier C., Kaufmann A., Lesemann D.-E.;
RT "Beet soil-borne virus RNA 2: similarities and dissimilarities to the coat
RT protein gene-carrying RNAs of other furoviruses";
RL J. Gen. Virol. 78(Pt 2):469-477(1997).
XX
RN [2]
RP 1-3454
RA Koenig R.;
RT ;
RL Submitted (19-JUL-1996) to the EMBL/GenBank/DDBJ databases.
RL Biologische Bundesanstalt fuer Land- und Forstwirtschaft, Institut fuer
RL Biochemie/Pflanzenvirolog, Messeweg 11, Braunschweig, D38104, Germany
XX
DR SPTREMBL; P87544; P87544.
DR SPTREMBL; P90291; P90291.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3454
FT /chromosome="RNA 2"
FT /db_xref="taxon:46436"
FT /organism="beet soil-borne virus"
FT /strain="Ahlum"
FT /specific_host="Beta vulgaris"
FT /lab_host="Chenopodium quinoa"
FT 5'UTR 1. .382
FT CDS 383. .877
FT /codon_start=1
FT /db_xref="SPTREMBL:P90291"
FT /function="coat protein"
FT /product="19K protein"
FT /protein_id="AAB47478.1"
FT /translation="MVDPRYEGWNQREAIRAKKRRFVSYDTFMDLIVNWREVRVGIIEH
FT SATILSQVSRLGEANFYGRTKRFGRVDTNGDVFYVDLSEARIRKILDNIIIALQTTSGE
FT GRAKRLGKEASTTAGAEDSALNVAHQLAELAELMTSDQFIEDACFTREKFEHEVGLRWV
FT E"
FT CDS 383. .3178
FT /codon_start=1
FT /db_xref="SPTREMBL:P87544"
FT /note="readthrough protein"
FT /transl_except=(pos:875. .877,aa:OTHER)
FT /product="104K protein"
FT /protein_id="AAB47479.1"
FT /translation="MVDPRYEGWNQREAIRAKKRRFVSYDTFMDLIVNWREVRVGIIEH
FT SATILSQVSRLGEANFYGRTKRFGRVDTNGDVFYVDLSEARIRKILDNIIIALQTTSGE
FT GRAKRLGKEASTTAGAEDSALNVAHQLAELAELMTSDQFIEDACFTREKFEHEVGLRWV
FT EXQSTAPPVKVDVRAEIDYINNRMKAAARLGLLPGQERHGDAKQTINYDDLDFALNRVA
FT GNLLPQTLALERCVESVPETFKDSEDRIDIKGGNPVGETVAKSLIDSHDVKVKKDIGVD
FT GDGLAWVLAAIFAFLSMLFFSLMCFGSRRFLRLAIRREGKPGGGTMMFLSRIFTNIRYR
FT LRDRAVRLVSRMRYSKRSRYSRSDMRRYLNDYKFSYIPWVADDFMSSDDKKVVADQNAF
FT VEAVKLVDEGDTDLVLDAVKRVKEIIQDYLSFTPDFLEIIEMKAAFVVSRKVSIINVPE
FT ERDILNLQDKAFDPISCGMPDVQQCSMEEVIKFDLQEVNCGATDDQTSLKSYVDLLRGL
FT QYMFSLVGTVKFIAVYMAYSGKQYKCVAEAYASDLEMRKSSVDSATNGTVEKEKSSYVD
FT EICLALRILFAMPAFISLIKSGGVVYRYFTHGGGPAARRRLRESLNELDNLEFQNRLNR
FT LREGAEDLGERSESSSTIEAFERRLEMLREGDDTGNEGNVAVDEIRSDTAPGTNTLPNA
FT SFNVGSAPIGGLAVIPCIGFPDSASEQRFARTQGKLLRSVRNDNDFKSRSIPEQQIETV
FT FRRDAADTLSNGSSFSSVVLDSDETFSMEKLEVLNKNSYSEVPGEMFTIMKGENVSHAT
FT VKLGNEDVVVVNADTDSPTVIAANSLSKLHKDKGIEFGTFNKEKILQLSSANIESSDKT
FT VSSSKTNNTVRDFTKVLKVIGMAGGRKSSKPGAAKAASSSSSVEVATSTEAMKTPMRQL
FT I"
FT 3'UTR 3179. .3454
XX
SQ Sequence 3454 BP; 965 A; 587 C; 870 G; 1032 T; 0 other;
U64512 Length: 3454 December 21, 2001 15:59 Type: N Check: 891 ..
1 ggtaatttta cttcttcgcc gtttatttaa cacagaagaa gaaaaaattt
51 ccaatttttt gttgcataga taaaacatac ggacaggtat cggtgttttt
101 gaagtgtaac ttaaaatcgg tttttatagt attattggtg tacaggcagg
151 tccgagcact aatatttacc atataaactg tattgcgttg acggaggcgt
201 aagaaaaact atactttcgt ttgattcgct cgatttggcg agtaaaatat
251 aaatcatatc cggtaataat tgatccattt tccagtctac gtacctctat
301 tgaggagcgt gctattggag gtgtaactcg tagtgatcaa gcgccgagac
351 gtgttgcaat tcccattacg tcatctgtta agatggttga tccgcggtat
401 gaagggtgga accaacgtga ggctataaga gccaagaagc gaaggtttgt
451 atcttacgat acttttatgg atttaatcgt taattggcga gaggtgcggg
501 tcggtattat agagcactcc gctactatac tgtcgcaggt tagtaggtta
551 ggggaagcaa atttttacgg acgtactaag cgcttcggaa gagttgacac
601 taacggtgac gttttttatg ttgatttgag tgaggccagg ataagaaaaa
651 ttttagataa cataattatt gctttacaga ctacttccgg tgaaggacgc
701 gctaaacgat taggaaagga ggcgagcacg acagcaggcg cggaagatag
751 cgctctgaat gtggcacatc aactcgccga gctagccgag cttatgacct
801 ccgatcagtt tattgaagac gcttgcttca cgagagaaaa gtttgagcat
851 gaagttggtt tgcgctgggt tgaatagcaa tcaactgctc cgccggttaa
901 agtggacgta cgtgctgaaa ttgattatat taacaatcga atgaaagcag
951 cggcgcgttt aggtctacta ccggggcagg agcgacacgg tgacgcgaaa
1001 caaactataa attatgatga tctggatttt gctttgaata gggttgctgg
1051 taatttgtta ccgcagactt tggctttgga gcggtgcgtt gagtccgttc
1101 ctgaaacttt taaggattca gaggaccgaa ttgacataaa aggcggtaac
1151 cccgtcggtg aaacggttgc gaaatctctg attgattctc atgacgttaa
1201 ggtcaaaaag gatataggag ttgacgggga tggtttagcc tgggttttgg
1251 cggctatttt cgcttttctt tctatgttgt ttttctcctt gatgtgtttt
1301 gggagtagga ggtttctgcg tctggcgatt cgacgtgagg gtaaacctgg
1351 gggaggtacg atgatgtttt tatcaagaat ttttacaaac attagatatc
1401 gtctgagaga tcgcgctgtg aggcttgtct cgcggatgcg gtattctaag
1451 cgctcgaggt atagtcgtag cgatatgcga cgttatctta atgattataa
1501 attcagttac ataccttggg ttgccgatga ttttatgagt agcgacgata
1551 agaaggttgt ggcagatcag aatgcttttg tggaagctgt taagcttgtg
1601 gacgaaggtg acactgattt ggtattagat gcagtaaaac gtgttaagga
1651 aataatccaa gactatttga gttttacacc cgactttctt gaaatcattg
1701 agatgaaagc ggcctttgtg gtgtcgagga aggttagcat tattaacgtt
1751 ccggaagagc gcgacatact taatctccag gataaagctt ttgatcctat
1801 ttcatgcggc atgcctgatg tacaacaatg cagtatggag gaggtgataa
1851 agtttgatct acaggaggta aattgtggcg ccactgatga tcaaacgtcg
1901 ttaaaatcat atgtcgatct actaagagga ttgcagtata tgttttcact
1951 tgtaggtacg gtgaagttta tagctgtgta tatggcttat tctgggaaac
2001 aatacaagtg tgtggccgaa gcttacgcta gcgatttaga aatgagaaaa
2051 tcgtccgtag attccgccac gaacggtact gttgagaaag aaaaatcttc
2101 ttatgtagat gagatatgtt tagcgctacg cattttattt gcgatgccag
2151 ctttcatttc tctgattaaa tcaggtggtg ttgtttatcg ctattttacc
2201 cacggaggag gcccggcagc gcgtagacgc ttaagggaat ctcttaatga
2251 gttggataat ttagagtttc aaaaccgttt gaatcgtctt cgcgaaggcg
2301 cggaggattt gggagagcgt tcagagtcat cgtctaccat agaagctttt
2351 gaaaggcgtt tagagatgtt gagggaagga gatgatactg ggaatgaagg
2401 caacgttgct gtggatgaaa ttcgtagcga caccgcccct ggtactaaca
2451 ccttgccgaa cgcatctttt aatgtcggtt cagctcctat tggtggttta
2501 gctgttatac cttgcattgg ttttccggac agtgcgtcgg agcaacgttt
2551 cgctcggact caaggcaaac ttttgaggag tgtaaggaat gataacgatt
2601 ttaaaagtcg tagtattcct gaacagcaga tcgagacggt gtttcgacgg
2651 gatgctgcgg acacgttatc taacggctcc agtttttctt ccgtagtttt
2701 agactcggat gaaacattta gcatggaaaa attagaagtt ctaaataaga
2751 attcgtatag tgaagtgcct ggtgaaatgt tcaccattat gaagggtgag
2801 aatgtgtctc acgctacagt taagcttggg aacgaagatg tagttgtggt
2851 gaatgctgat acagattctc ctacagttat agctgcgaat tcgttatcca
2901 aacttcataa agataaaggc atcgagttcg gaacttttaa caaagagaag
2951 atattacaac tttccagtgc taacattgag agttcggata aaacagtgtc
3001 ttcatcaaaa accaataaca cagtacgtga ctttactaaa gttttgaagg
3051 ttattggaat ggctggtggc agaaaatctt ccaaaccggg ggcagcgaaa
3101 gctgcttctt cttcgtctag cgttgaagta gctacgtcga cggaagctat
3151 gaaaactccc atgagacaat tgatttaaat tgttcttggg gtttatgatt
3201 aattattatt attaatttta aacaagaaat gattatttgg cgtgatcaac
3251 caacgtgggt tatacgataa taaccggtgc ttttatgttc accgaaatcg
3301 aacatacgtt ttatagacct gcagtcgcta ttaagataat taacaaaaac
3351 ttaatatttg acttatgtag gtgagagtag tttctctcgg tcatcatcac
3401 acgatgatcc tgtggggtgc aaatcccccc cttaacttga gggaaatcaa
3451 gccc