Sequence of DPV Saccharomyces 23S RNA narnavirus
Saccharomyces cerevisiae narnavirus 23S RNA
ACC No: U90136
Dated: 2002-06-20 | Length: 2891 | CRC: 1301867095
!!NA_SEQUENCE 1.0
ID U90136 standard; RNA; VRL; 2891 BP.
XX
AC U90136; M86595;
XX
SV U90136.1
XX
DT 07-JAN-1999 (Rel. 58, Created)
DT 20-JUN-2002 (Rel. 72, Last updated, Version 3)
XX
DE Saccharomyces cerevisiae narnavirus 23S RNA RNA-dependent RNA
DE polymerase gene, complete cds.
XX
KW .
XX
OS Saccharomyces cerevisiae narnavirus 23S RNA
OC Viruses; ssRNA negative-strand viruses; Narnaviridae; Narnavirus.
XX
RN [1]
RP 1-2891
RX MEDLINE; 92268145.
RX PUBMED; 1587863.
RA Esteban L.M., Rodriguez-Cousino N., Esteban R.;
RT "T double-stranded RNA (dsRNA) sequence reveals that T and W dsRNAs form a
RT new RNA family in Saccharomyces cerevisiae. Identification of 23 S RNA as
RT the single-stranded form of T dsRNA";
RL J. Biol. Chem. 267(15):10874-10881(1992).
XX
RN [2]
RP 1-2891
RX MEDLINE; 98352075.
RX PUBMED; 9685388.
RA Rodriguez-Cousino N., Solorzano A., Fujimura T., Esteban R.;
RT "Yeast positive-stranded virus-like RNA replicons. 20 S and 23 S RNA
RT terminal nucleotide sequences and 3' end secondary structures resemble
RT those of RNA coliphages";
RL J. Biol. Chem. 273(32):20363-20371(1998).
XX
RN [3]
RP 1-2891
RA Rodriguez-Cousino N., Estaban R.;
RT ;
RL Submitted (20-FEB-1997) to the EMBL/GenBank/DDBJ databases.
RL Departamento de Microbiologia y Genetica/Instituto de Microbiologia
RL Bioquimica., Universidad de Salamanca/Consejo Superior de Investigaciones
RL Cientificas, Edificio Departamental. Avda del Campo Charro s/n, Salamanca
RL 37007, Spain
XX
DR SPTREMBL; Q07048; Q07048.
XX
CC On Dec 31, 1998 this sequence version replaced gi:172439.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2891
FT /db_xref="taxon:198599"
FT /note="T dsRNA"
FT /organism="Saccharomyces cerevisiae narnavirus 23S RNA "
FT /strain="37-4C"
FT CDS 7. .2832
FT /codon_start=1
FT /db_xref="SPTREMBL:Q07048"
FT /product="RNA-dependent RNA polymerase"
FT /protein_id="AAC98708.1"
FT /translation="MHHKVNVKTQREVHFPMDLLQACGASAPRPVARVSRATDLDRRYR
FT CVLSLPEERARSVGCKWSSTRAALRRGLEELGSREFRRRLRLADDCWRAICAAVCTGRK
FT FPSFSVTDRPARARLAKVYRMGRRLLVGVVCRGESVVSDLKQECADLRRVIFEGSTRIP
FT SSSLWGLVGVLGWTSPERAMQLTFIGRALPYGSPDVERRALASHAATLSIPAECHPNYL
FT VAAEQFAKSWADDNLPRKFRIYPIAVQESSCMEYSRAQGGLLQSFRKGFVGYDPAAPSA
FT DPDDLELAKERGFSRIRASWYSTFRYRGELKSTNQSLEARVAVVPERGFKARIVTTHSA
FT SRVTFGHQFRRYLLQGIRRHPALVDVIGGDHRRAVETMDGDFGLLRPDGRLLSADLTSA
FT SDRIPHDLVKAILRGIFSDPDRRPPGTSLADVFDLVLGPYHLHYPDGSEVTVRQGILMG
FT LPTTWPLLCLIHLFWVELSDWAPARPNHSRGFVLGESFRICGDDLIAWWRPERIALYNQ
FT IAVDCGAQFSAGKHLESKTWGIFTEKVFTVKPVKMKVRVRSEPSLKGYVFSRSSAFSCR
FT MGGKGITGIRAARLYTIGAMPRWSRRIRDVYPGSLEHRTASQRYGEPVTVYRFGRWSSA
FT IPLRWAVRAPTRTVGNPVQSLPDWFTVGPAASSVAADSNAFGAVSRVLRRMFPGLPRKL
FT ASAGIPPYLPRVFGGGGLVKSTGLTTKIGAVASRRWMSRIGHDLYRSRERKSTLGRVWT
FT LSTSPAYAASLHEVEKFMDRPDIILTRKCRNPMLKHARELGLFEEVFESRVGGGILWAS
FT LNGKALVESHSPSILQVSRNLRRSLACPSGGFLRPSAPIGKLVQRHTLPRGTVWFLESS
FT ATDSARQGGMGLPPPPPPPLGGGGMAGPPPPPFMGLRPESSVPTSVPFTPSMFSERLAA
FT LESLFGRPPPS"
XX
SQ Sequence 2891 BP; 507 A; 857 C; 848 G; 679 T; 0 other;
U90136 Length: 2891 July 2, 2002 09:24 Type: N Check: 6663 ..
1 ggggccatgc atcacaaggt taatgtgaaa acacagcgag aagtccattt
51 cccaatggac ctcttgcaag cctgtggtgc atctgcccct aggccagttg
101 cccgtgtttc acgtgcaacc gacctagacc gacgctacag gtgcgtcctc
151 agtttacctg aggagcgtgc tcgcagtgtt gggtgtaaat ggtcgtcgac
201 ccgagcggcg ttacgacgtg gactcgagga gcttggctcc cgcgagttcc
251 gccgtcgtct ccgtttggcg gacgattgct ggcgcgcgat ctgcgcggcc
301 gtctgcacgg gtcggaagtt tccttccttc tcggtgacag atcggccggc
351 aagagctcgc cttgcaaaag tctaccgtat gggtcgtcga ctgctagtag
401 gtgtggtctg ccgaggcgaa tcggtcgtct ccgacctcaa gcaggagtgt
451 gcagatttgc ggcgtgtgat cttcgaaggg tccacccgga tcccgtccag
501 ttccttatgg ggactggtcg gggtcctagg ttggacctct ccggagaggg
551 cgatgcagct gacgttcatc ggccgggctc tcccttatgg gagtccagac
601 gttgagcgtc gtgctctcgc ctcacatgcc gccactctgt ccatccccgc
651 tgagtgccat cctaactacc tcgtagccgc ggaacaattc gcgaaatcct
701 gggcagatga taacctgccc cggaaattcc ggatttatcc cattgcggtg
751 caggagtcct cctgtatgga gtactcccgt gcgcaaggcg gtctactgca
801 gtcgtttagg aaaggctttg tcgggtacga tcccgcggcg ccttcggcag
851 accctgatga tctcgagttg gcaaaggagc gtggattctc tcgaatccgc
901 gcctcttggt actccacttt ccgctatcgc ggagagttga agtccaccaa
951 tcagtctctc gaggcccggg tcgctgtggt ccctgagagg gggttcaagg
1001 cgaggattgt gaccacgcac agcgcatcgc gcgtgacgtt cggtcatcaa
1051 ttccgccgtt acctcctcca ggggatcagg cgacacccgg ctctggttga
1101 cgtgattgga ggcgatcata gacgagctgt cgaaactatg gatggcgact
1151 tcggcctgtt aaggccagat ggtcgtctcc tttccgcgga cttgacgtca
1201 gcatctgacc ggatacccca tgacttggtg aaagccattt tgcggggcat
1251 cttctcggat cctgatcgac gtcctccggg aacgtccctt gcggacgttt
1301 tcgacctcgt cctcggaccc tatcaccttc actaccctga cggtagtgaa
1351 gtgaccgttc gtcagggaat ccttatggga ctcccgacga cctggcctct
1401 gctatgtcta atccacctgt tctgggtgga actctccgat tgggcccccg
1451 cgcgtcctaa tcattcgcgc gggtttgtcc tcggggagtc cttcagaatt
1501 tgtggcgacg acctgattgc ttggtggcga cccgaaagga tcgccctcta
1551 caatcagatt gccgtagact gcggagccca gttttcagcg gggaagcacc
1601 tcgagtcgaa gacttggggg atcttcactg aaaaggtctt cacggttaaa
1651 cccgtgaaga tgaaggtccg ggttcgctct gagccatctt tgaagggcta
1701 cgtgttctcc cgatctagtg ccttctcctg ccgaatggga ggaaagggca
1751 taactggtat ccgggcggcc cggctataca ccatcggagc gatgcctcgt
1801 tggagtcgtc gcatccggga tgtctatcct ggttcgctcg aacatcgtac
1851 tgcttctcag cggtacggtg aaccggttac tgtgtaccgt tttggtcgct
1901 ggtcttccgc aattccactt cggtgggctg ttcgggcccc cacccgtacg
1951 gtggggaacc ctgtccagtc cttaccggat tggttcacgg tgggaccagc
2001 tgcttcttcg gtcgctgctg attcaaacgc ctttggggcg gtatcgaggg
2051 tccttcgacg gatgttcccg ggtttacccc ggaaacttgc gtcagcgggc
2101 attcctccgt acctccctcg ggtgtttggc ggcggcggtc tggtgaaatc
2151 caccggactc acaactaaga tcggggccgt tgcttcccgc cgctggatga
2201 gtcggatcgg gcacgatctt tatcgatccc gtgagaggaa gtcgacgtta
2251 gggagggtgt ggacactgtc cacatccccc gcttacgccg cctccctcca
2301 cgaggtcgag aagttcatgg accgccccga catcatcttg acgaggaagt
2351 gtcggaaccc catgctgaag catgctcggg aactcggttt attcgaggag
2401 gtcttcgaga gtcgggtggg aggtggaatc ctatgggctt cccttaatgg
2451 aaaagccctt gtggaatccc actccccctc gatcctccaa gtctcccgga
2501 atctccggcg atcccttgcg tgccccagtg ggggtttcct cagaccatct
2551 gcccctatag ggaagctggt ccaacgacat acgttgcctc ggggaacggt
2601 ctggttctta gaaagttccg cgaccgactc ggcccgtcag ggagggatgg
2651 gtctgccacc accaccaccg ccgcctctag gcggaggtgg gatggcgggt
2701 ccgccaccac ctcctttcat gggccttcgc cccgaatcat cagttcctac
2751 tagtgttcca tttacacctt caatgttctc tgaacgcctt gctgcgttag
2801 agtcattgtt cggccgcccg ccaccttcat gatggcagaa cggggaaact
2851 cgttccgctc aggcacggta taattaccgg gcctgagccc c